RNA–Protein interactions for RNA: ENST00000502850.5

NUP54-202, Transcript of nucleoporin 54, humanhuman

TSL 1 (best)

Gene NUP54, Length 1,604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-202ENST00000502850 CXorf67Q86X51 503 aaPredicted RBP10.11□□□□□ -0.79
NUP54-202ENST00000502850 FAM90A1Q86YD7 464 aa10.11□□□□□ -0.79
NUP54-202ENST00000502850 GPR146Q96CH1 333 aa10.11□□□□□ -0.79
NUP54-202ENST00000502850 AIFM2Q9BRQ8 373 aa10.11□□□□□ -0.79
NUP54-202ENST00000502850 MAGT1Q9H0U3 335 aa10.11□□□□□ -0.79
NUP54-202ENST00000502850 SEBOXQ9HB31 216 aaPredicted RBP10.11□□□□□ -0.79
NUP54-202ENST00000502850 PLA2G2EQ9NZK7 142 aa10.11□□□□□ -0.79
NUP54-202ENST00000502850 OR14J1Q9UGF5 321 aa10.11□□□□□ -0.79
NUP54-202ENST00000502850 RNF150Q9ULK6 438 aa10.11□□□□□ -0.79
NUP54-202ENST00000502850 LAMP3Q9UQV4 416 aa10.11□□□□□ -0.79
NUP54-202ENST00000502850 FAM157AC9JC47 383 aa10.1□□□□□ -0.79
NUP54-202ENST00000502850 PAX6P26367 422 aa10.1□□□□□ -0.79
NUP54-202ENST00000502850 DYNLT3P51808 116 aa10.1□□□□□ -0.79
NUP54-202ENST00000502850 HBG1P69891 147 aa10.1□□□□□ -0.79
NUP54-202ENST00000502850 HBG2P69892 147 aa10.1□□□□□ -0.79
NUP54-202ENST00000502850 SRSF6Q13247 344 aaKnown RBP10.1□□□□□ -0.79
NUP54-202ENST00000502850 IGFBP7Q16270 282 aa10.1□□□□□ -0.79
NUP54-202ENST00000502850 PRR18Q8N4B5 295 aa10.1□□□□□ -0.79
NUP54-202ENST00000502850 OR10Z1Q8NGY1 313 aa10.1□□□□□ -0.79
NUP54-202ENST00000502850 PPP1R35Q8TAP8 253 aa10.1□□□□□ -0.79
NUP54-202ENST00000502850 FAM213BQ8TBF2 198 aa10.1□□□□□ -0.79
NUP54-202ENST00000502850 BBC3Q96PG8 261 aaPredicted RBP10.1□□□□□ -0.79
NUP54-202ENST00000502850 EIF5A2Q9GZV4 153 aaKnown RBP10.1□□□□□ -0.79
NUP54-202ENST00000502850 SH3BGRL3Q9H299 93 aa10.1□□□□□ -0.79
NUP54-202ENST00000502850 HIPK2Q9H2X6 1198 aa10.1□□□□□ -0.79
NUP54-202ENST00000502850 ZNF71Q9NQZ8 489 aaPredicted RBP10.1□□□□□ -0.79
NUP54-202ENST00000502850 CELSR3Q9NYQ7 3312 aa10.1□□□□□ -0.79
NUP54-202ENST00000502850 IGHV2OR16-5A0A0B4J2B6 119 aa10.09□□□□□ -0.79
NUP54-202ENST00000502850 H0YL77 283 aa10.09□□□□□ -0.79
NUP54-202ENST00000502850 TXNL1O43396 289 aa10.09□□□□□ -0.79
NUP54-202ENST00000502850 SYNGR2O43760 224 aa10.09□□□□□ -0.79
NUP54-202ENST00000502850 TNFSF13O75888 250 aa10.09□□□□□ -0.79
NUP54-202ENST00000502850 SCAF4O95104 1147 aaKnown RBP10.09□□□□□ -0.79
NUP54-202ENST00000502850 IGLV2-14P01704 120 aa10.09□□□□□ -0.79
NUP54-202ENST00000502850 CRYABP02511 175 aaKnown RBP10.09□□□□□ -0.79
NUP54-202ENST00000502850 WT1P19544 449 aaPredicted RBP10.09□□□□□ -0.79
NUP54-202ENST00000502850 EPHA1P21709 976 aa10.09□□□□□ -0.79
NUP54-202ENST00000502850 PPT1P50897 306 aa10.09□□□□□ -0.79
NUP54-202ENST00000502850 TLE4Q04727 773 aa10.09□□□□□ -0.79
NUP54-202ENST00000502850 ALKBH6Q3KRA9 238 aa10.09□□□□□ -0.79
NUP54-202ENST00000502850 AKR1C8PQ5T2L2 129 aa10.09□□□□□ -0.79
NUP54-202ENST00000502850 SLC25A24Q6NUK1 477 aa10.09□□□□□ -0.79
NUP54-202ENST00000502850 WDR82Q6UXN9 313 aa10.09□□□□□ -0.79
NUP54-202ENST00000502850 C5orf24Q7Z6I8 188 aa10.09□□□□□ -0.79
NUP54-202ENST00000502850 STARD4Q96DR4 205 aa10.09□□□□□ -0.79
NUP54-202ENST00000502850 RBMXL1Q96E39 390 aaKnown RBP10.09□□□□□ -0.79
NUP54-202ENST00000502850 LURAP1Q96LR2 239 aa10.09□□□□□ -0.79
NUP54-202ENST00000502850 SMCO4Q9NRQ5 59 aa10.09□□□□□ -0.79
NUP54-202ENST00000502850 CACNG5Q9UF02 275 aa10.09□□□□□ -0.79
NUP54-202ENST00000502850 PPP1R3CQ9UQK1 317 aa10.09□□□□□ -0.79
NUP54-202ENST00000502850 IGHV1-18A0A0C4DH31 117 aa10.08□□□□□ -0.8
NUP54-202ENST00000502850 KLK10O43240 276 aa10.08□□□□□ -0.8
NUP54-202ENST00000502850 AGFG2O95081 481 aa10.08□□□□□ -0.8
NUP54-202ENST00000502850 CGAP01215 116 aa10.08□□□□□ -0.8
NUP54-202ENST00000502850 OMGP23515 440 aa10.08□□□□□ -0.8
NUP54-202ENST00000502850 NPBWR1P48145 328 aa10.08□□□□□ -0.8
NUP54-202ENST00000502850 UCNP55089 124 aa10.08□□□□□ -0.8
NUP54-202ENST00000502850 SMUG1Q53HV7 270 aa10.08□□□□□ -0.8
NUP54-202ENST00000502850 DRAM1Q8N682 238 aa10.08□□□□□ -0.8
NUP54-202ENST00000502850 TMEM171Q8WVE6 324 aa10.08□□□□□ -0.8
NUP54-202ENST00000502850 GPHA2Q96T91 129 aa10.08□□□□□ -0.8
NUP54-202ENST00000502850 SLC35B3Q9H1N7 401 aa10.08□□□□□ -0.8
NUP54-202ENST00000502850 RAB9BQ9NP90 201 aa10.08□□□□□ -0.8
NUP54-202ENST00000502850 KCNJ16Q9NPI9 418 aa10.08□□□□□ -0.8
NUP54-202ENST00000502850 MMP24Q9Y5R2 645 aa10.08□□□□□ -0.8
NUP54-202ENST00000502850 ATRXP46100 2492 aa10.08□□□□□ -0.8
NUP54-202ENST00000502850 IGSF10Q6WRI0 2623 aa10.08□□□□□ -0.8
NUP54-202ENST00000502850 C12orf77C9JDV5 145 aa10.07□□□□□ -0.8
NUP54-202ENST00000502850 SPINT2O43291 252 aa10.07□□□□□ -0.8
NUP54-202ENST00000502850 CST7O76096 145 aa10.07□□□□□ -0.8
NUP54-202ENST00000502850 ADH4P08319 380 aa10.07□□□□□ -0.8
NUP54-202ENST00000502850 OR8U8P0C7N1 319 aa10.07□□□□□ -0.8
NUP54-202ENST00000502850 ZNF16P17020 682 aaPredicted RBP10.07□□□□□ -0.8
NUP54-202ENST00000502850 GABRA2P47869 451 aa10.07□□□□□ -0.8
NUP54-202ENST00000502850 OR3A1P47881 315 aa10.07□□□□□ -0.8
NUP54-202ENST00000502850 FOXF2Q12947 444 aa10.07□□□□□ -0.8
NUP54-202ENST00000502850 HFEQ30201 348 aa10.07□□□□□ -0.8
NUP54-202ENST00000502850 TIMM23BQ5SRD1 257 aa10.07□□□□□ -0.8
NUP54-202ENST00000502850 ZNF66Q6ZN08 573 aa10.07□□□□□ -0.8
NUP54-202ENST00000502850 C11orf53Q8IXP5 236 aa10.07□□□□□ -0.8
NUP54-202ENST00000502850 ZNF610Q8N9Z0 462 aa10.07□□□□□ -0.8
NUP54-202ENST00000502850 SCGB1C1Q8TD33 95 aa10.07□□□□□ -0.8
NUP54-202ENST00000502850 TAAR6Q96RI8 345 aa10.07□□□□□ -0.8
NUP54-202ENST00000502850 PSMG3Q9BT73 122 aaPredicted RBP10.07□□□□□ -0.8
NUP54-202ENST00000502850 PARD6GQ9BYG4 376 aaPredicted RBP10.07□□□□□ -0.8
NUP54-202ENST00000502850 KIAA1456Q9P272 454 aa10.07□□□□□ -0.8
NUP54-202ENST00000502850 MLXQ9UH92 298 aa10.07□□□□□ -0.8
NUP54-202ENST00000502850 SLC25A15Q9Y619 301 aa10.07□□□□□ -0.8
NUP54-202ENST00000502850 ARID1AO14497 2285 aa10.07□□□□□ -0.8
NUP54-202ENST00000502850 A0A0G2JRQ6 117 aa10.07□□□□□ -0.8
NUP54-202ENST00000502850 KIAA1324LA8MWY0 1029 aaPredicted RBP10.07□□□□□ -0.8
NUP54-202ENST00000502850 ATP6V1G2-DDX39BF2Z307 99 aa10.07□□□□□ -0.8
NUP54-202ENST00000502850 PSPNO60542 156 aa10.07□□□□□ -0.8
NUP54-202ENST00000502850 LY86O95711 162 aa10.07□□□□□ -0.8
NUP54-202ENST00000502850 PTBP3O95758 552 aaKnown RBP10.07□□□□□ -0.8
NUP54-202ENST00000502850 TMEM50AO95807 157 aa10.07□□□□□ -0.8
NUP54-202ENST00000502850 HBZP02008 142 aa10.07□□□□□ -0.8
NUP54-202ENST00000502850 PAX9P55771 341 aa10.07□□□□□ -0.8
NUP54-202ENST00000502850 TMPRSS3P57727 454 aa10.07□□□□□ -0.8
NUP54-202ENST00000502850 RPS23P62266 143 aaKnown RBP10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms