RNA–Protein interactions for RNA: ENST00000502820.1

HTT-202, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 287 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-202ENST00000502820 ZNF230Q9UIE0 474 aaPredicted RBP4.37□□□□□ -1.71
HTT-202ENST00000502820 HHLA2Q9UM44 414 aa4.37□□□□□ -1.71
HTT-202ENST00000502820 GPR132Q9UNW8 380 aa4.37□□□□□ -1.71
HTT-202ENST00000502820 C14orf166Q9Y224 244 aaKnown RBP4.37□□□□□ -1.71
HTT-202ENST00000502820 HIF3AQ9Y2N7 669 aa4.37□□□□□ -1.71
HTT-202ENST00000502820 AMDHD2Q9Y303 409 aa4.37□□□□□ -1.71
HTT-202ENST00000502820 MMP24Q9Y5R2 645 aa4.37□□□□□ -1.71
HTT-202ENST00000502820 NUP214P35658 2090 aaPredicted RBP4.37□□□□□ -1.71
HTT-202ENST00000502820 FREM3P0C091 2139 aa4.37□□□□□ -1.71
HTT-202ENST00000502820 TRRAPQ9Y4A5 3859 aa4.37□□□□□ -1.71
HTT-202ENST00000502820 ROS1P08922 2347 aa4.37□□□□□ -1.71
HTT-202ENST00000502820 IGHV3OR16-10A0A075B7F0 116 aa4.36□□□□□ -1.71
HTT-202ENST00000502820 DUXBA0A1W2PPF3 345 aa4.36□□□□□ -1.71
HTT-202ENST00000502820 ZC3H12DA2A288 527 aaKnown RBP4.36□□□□□ -1.71
HTT-202ENST00000502820 IFITM10A6NMD0 228 aa4.36□□□□□ -1.71
HTT-202ENST00000502820 WNT9BO14905 357 aa4.36□□□□□ -1.71
HTT-202ENST00000502820 MMP23AO75900 390 aa4.36□□□□□ -1.71
HTT-202ENST00000502820 RPP14O95059 124 aaKnown RBP4.36□□□□□ -1.71
HTT-202ENST00000502820 YIF1AO95070 293 aa4.36□□□□□ -1.71
HTT-202ENST00000502820 IFNA1P01562 189 aa4.36□□□□□ -1.71
HTT-202ENST00000502820 OR8U9P0C7N5 309 aa4.36□□□□□ -1.71
HTT-202ENST00000502820 TMEM225BP0DP42 221 aa4.36□□□□□ -1.71
HTT-202ENST00000502820 MMP9P14780 707 aa4.36□□□□□ -1.71
HTT-202ENST00000502820 ALOX5APP20292 161 aa4.36□□□□□ -1.71
HTT-202ENST00000502820 GCH1P30793 250 aa4.36□□□□□ -1.71
HTT-202ENST00000502820 THBS4P35443 961 aa4.36□□□□□ -1.71
HTT-202ENST00000502820 NAA10P41227 235 aaPredicted RBP4.36□□□□□ -1.71
HTT-202ENST00000502820 ACAA2P42765 397 aaKnown RBP4.36□□□□□ -1.71
HTT-202ENST00000502820 POLR2HP52434 150 aaKnown RBP4.36□□□□□ -1.71
HTT-202ENST00000502820 LOXL3P58215 753 aa4.36□□□□□ -1.71
HTT-202ENST00000502820 NANOS3P60323 173 aaKnown RBP4.36□□□□□ -1.71
HTT-202ENST00000502820 UBE2KP61086 200 aa4.36□□□□□ -1.71
HTT-202ENST00000502820 BAXQ07812 192 aa4.36□□□□□ -1.71
HTT-202ENST00000502820 OR7A5Q15622 319 aa4.36□□□□□ -1.71
HTT-202ENST00000502820 DEFB121Q5J5C9 76 aa4.36□□□□□ -1.71
HTT-202ENST00000502820 ZNF506Q5JVG8 444 aa4.36□□□□□ -1.71
HTT-202ENST00000502820 C1orf194Q5T5A4 169 aa4.36□□□□□ -1.71
HTT-202ENST00000502820 LINC01590Q5TEZ4 76 aa4.36□□□□□ -1.71
HTT-202ENST00000502820 RPL7L1Q6DKI1 246 aaKnown RBP4.36□□□□□ -1.71
HTT-202ENST00000502820 OR2T2Q6IF00 324 aa4.36□□□□□ -1.71
HTT-202ENST00000502820 SLC18B1Q6NT16 456 aa4.36□□□□□ -1.71
HTT-202ENST00000502820 KLHL24Q6TFL4 600 aa4.36□□□□□ -1.71
HTT-202ENST00000502820 C1orf229Q6ZS94 237 aaPredicted RBP4.36□□□□□ -1.71
HTT-202ENST00000502820 ZNF627Q7L945 461 aa4.36□□□□□ -1.71
HTT-202ENST00000502820 SMIM15Q7Z3B0 74 aa4.36□□□□□ -1.71
HTT-202ENST00000502820 SYT9Q86SS6 491 aa4.36□□□□□ -1.71
HTT-202ENST00000502820 TRAPPC6BQ86SZ2 158 aa4.36□□□□□ -1.71
HTT-202ENST00000502820 LHFPL1Q86WI0 220 aa4.36□□□□□ -1.71
HTT-202ENST00000502820 LSRQ86X29 649 aaPredicted RBP4.36□□□□□ -1.71
HTT-202ENST00000502820 SGPP2Q8IWX5 399 aa4.36□□□□□ -1.71
HTT-202ENST00000502820 ZNF679Q8IYX0 411 aa4.36□□□□□ -1.71
HTT-202ENST00000502820 ZNF101Q8IZC7 436 aa4.36□□□□□ -1.71
HTT-202ENST00000502820 BCL6BQ8N143 479 aaPredicted RBP4.36□□□□□ -1.71
HTT-202ENST00000502820 PRSS35Q8N3Z0 413 aa4.36□□□□□ -1.71
HTT-202ENST00000502820 SLC22A24Q8N4F4 322 aa4.36□□□□□ -1.71
HTT-202ENST00000502820 LRTM2Q8N967 370 aa4.36□□□□□ -1.71
HTT-202ENST00000502820 CCDC54Q8NEL0 328 aa4.36□□□□□ -1.71
HTT-202ENST00000502820 SLC26A10Q8NG04 563 aa4.36□□□□□ -1.71
HTT-202ENST00000502820 OR52N4Q8NGI2 321 aa4.36□□□□□ -1.71
HTT-202ENST00000502820 OR6K6Q8NGW6 343 aa4.36□□□□□ -1.71
HTT-202ENST00000502820 OR8S1Q8NH09 359 aa4.36□□□□□ -1.71
HTT-202ENST00000502820 OR8U1Q8NH10 309 aa4.36□□□□□ -1.71
HTT-202ENST00000502820 SVIPQ8NHG7 77 aa4.36□□□□□ -1.71
HTT-202ENST00000502820 PFN4Q8NHR9 129 aa4.36□□□□□ -1.71
HTT-202ENST00000502820 MFSD8Q8NHS3 518 aa4.36□□□□□ -1.71
HTT-202ENST00000502820 OTOSQ8NHW6 89 aa4.36□□□□□ -1.71
HTT-202ENST00000502820 CD300LFQ8TDQ1 290 aa4.36□□□□□ -1.71
HTT-202ENST00000502820 FGGYQ96C11 551 aa4.36□□□□□ -1.71
HTT-202ENST00000502820 DDIT4LQ96D03 193 aa4.36□□□□□ -1.71
HTT-202ENST00000502820 MISP3Q96FF7 219 aa4.36□□□□□ -1.71
HTT-202ENST00000502820 SEC22AQ96IW7 307 aa4.36□□□□□ -1.71
HTT-202ENST00000502820 FAM210BQ96KR6 192 aa4.36□□□□□ -1.71
HTT-202ENST00000502820 OR8B4Q96RC9 309 aa4.36□□□□□ -1.71
HTT-202ENST00000502820 INTS14Q96SY0 518 aa4.36□□□□□ -1.71
HTT-202ENST00000502820 HIST1H2BLQ99880 126 aa4.36□□□□□ -1.71
HTT-202ENST00000502820 SYT3Q9BQG1 590 aa4.36□□□□□ -1.71
HTT-202ENST00000502820 PCGF1Q9BSM1 259 aa4.36□□□□□ -1.71
HTT-202ENST00000502820 SCRT1Q9BWW7 348 aa4.36□□□□□ -1.71
HTT-202ENST00000502820 CHST6Q9GZX3 395 aa4.36□□□□□ -1.71
HTT-202ENST00000502820 SLC25A31Q9H0C2 315 aa4.36□□□□□ -1.71
HTT-202ENST00000502820 METTL8Q9H825 291 aaKnown RBP4.36□□□□□ -1.71
HTT-202ENST00000502820 CDH20Q9HBT6 801 aa4.36□□□□□ -1.71
HTT-202ENST00000502820 FRRS1LQ9P0K9 344 aa4.36□□□□□ -1.71
HTT-202ENST00000502820 FBXL17Q9UF56 701 aa4.36□□□□□ -1.71
HTT-202ENST00000502820 MRM2Q9UI43 246 aaKnown RBP4.36□□□□□ -1.71
HTT-202ENST00000502820 PRKDCP78527 4128 aaKnown RBP4.36□□□□□ -1.71
HTT-202ENST00000502820 MED12LQ86YW9 2145 aa4.36□□□□□ -1.71
HTT-202ENST00000502820 ALPK2Q86TB3 2170 aa4.36□□□□□ -1.71
HTT-202ENST00000502820 TRAV8-7A0A075B6U6 113 aa4.35□□□□□ -1.71
HTT-202ENST00000502820 TRAV27A0A087WT01 109 aa4.35□□□□□ -1.71
HTT-202ENST00000502820 TMED7-TICAM2A0A0A6YYA0 188 aa4.35□□□□□ -1.71
HTT-202ENST00000502820 C13orf42A0A1B0GVH6 325 aa4.35□□□□□ -1.71
HTT-202ENST00000502820 A0A1B0GWA3 101 aa4.35□□□□□ -1.71
HTT-202ENST00000502820 A0A1W2PPE2 198 aa4.35□□□□□ -1.71
HTT-202ENST00000502820 A0A1W2PPK0 400 aa4.35□□□□□ -1.71
HTT-202ENST00000502820 RBFOX3A6NFN3 312 aa4.35□□□□□ -1.71
HTT-202ENST00000502820 NPIPB13A6NJU9 1138 aa4.35□□□□□ -1.71
HTT-202ENST00000502820 SERPINE3A8MV23 424 aa4.35□□□□□ -1.71
HTT-202ENST00000502820 VSTM5A8MXK1 200 aa4.35□□□□□ -1.71
HTT-202ENST00000502820 B9A039 149 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms