RNA–Protein interactions for RNA: ENST00000502781.5

LSM6-202, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-202ENST00000502781 CCDC144NLQ6NUI1 221 aa20.21■□□□□ 0.83
LSM6-202ENST00000502781 MZT2AQ6P582 158 aa20.21■□□□□ 0.83
LSM6-202ENST00000502781 IZUMO1Q8IYV9 350 aa20.21■□□□□ 0.83
LSM6-202ENST00000502781 MAFIPQ8WZ33 124 aa20.21■□□□□ 0.83
LSM6-202ENST00000502781 RPEQ96AT9 228 aa20.21■□□□□ 0.83
LSM6-202ENST00000502781 IGKV1D-8A0A087WSZ0 117 aa20.21■□□□□ 0.83
LSM6-202ENST00000502781 ITGB1BP1O14713 200 aa20.21■□□□□ 0.83
LSM6-202ENST00000502781 NOL3O60936 208 aaKnown RBP20.21■□□□□ 0.83
LSM6-202ENST00000502781 ZNF816Q0VGE8 651 aaPredicted RBP20.21■□□□□ 0.83
LSM6-202ENST00000502781 TOMM40LQ969M1 308 aa20.21■□□□□ 0.83
LSM6-202ENST00000502781 ABHD14AQ9BUJ0 271 aa20.21■□□□□ 0.83
LSM6-202ENST00000502781 TOLLIPQ9H0E2 274 aa20.21■□□□□ 0.83
LSM6-202ENST00000502781 CCDC59Q9P031 241 aaKnown RBP20.21■□□□□ 0.83
LSM6-202ENST00000502781 OR1A1Q9P1Q5 309 aa20.21■□□□□ 0.83
LSM6-202ENST00000502781 SLC23A1Q9UHI7 598 aa20.21■□□□□ 0.83
LSM6-202ENST00000502781 TCF19Q9Y242 345 aa20.21■□□□□ 0.83
LSM6-202ENST00000502781 A0A1W2PPI3 338 aa20.2■□□□□ 0.82
LSM6-202ENST00000502781 GSTT2P0CG29 244 aa20.2■□□□□ 0.82
LSM6-202ENST00000502781 GSTT2BP0CG30 244 aa20.2■□□□□ 0.82
LSM6-202ENST00000502781 ZBTB25P24278 435 aa20.2■□□□□ 0.82
LSM6-202ENST00000502781 SOX6P35712 828 aa20.2■□□□□ 0.82
LSM6-202ENST00000502781 RAB7AP51149 207 aa20.2■□□□□ 0.82
LSM6-202ENST00000502781 ABCB10Q9NRK6 738 aa20.2■□□□□ 0.82
LSM6-202ENST00000502781 HPGDSO60760 199 aa20.19■□□□□ 0.82
LSM6-202ENST00000502781 HKR1P10072 659 aa20.19■□□□□ 0.82
LSM6-202ENST00000502781 ELK1P19419 428 aa20.19■□□□□ 0.82
LSM6-202ENST00000502781 IL3RAP26951 378 aa20.19■□□□□ 0.82
LSM6-202ENST00000502781 IGSF11Q5DX21 431 aa20.19■□□□□ 0.82
LSM6-202ENST00000502781 TMEM69Q5SWH9 247 aa20.19■□□□□ 0.82
LSM6-202ENST00000502781 CCBE1Q6UXH8 406 aaPredicted RBP20.19■□□□□ 0.82
LSM6-202ENST00000502781 LIAT1Q6ZQX7 453 aa20.19■□□□□ 0.82
LSM6-202ENST00000502781 ODF3L1Q8IXM7 274 aa20.19■□□□□ 0.82
LSM6-202ENST00000502781 OR8H3Q8N146 312 aa20.19■□□□□ 0.82
LSM6-202ENST00000502781 AGMATQ9BSE5 352 aa20.19■□□□□ 0.82
LSM6-202ENST00000502781 PARP12Q9H0J9 701 aaKnown RBP20.19■□□□□ 0.82
LSM6-202ENST00000502781 TRBV6-7A0A0A0MS04 114 aa20.18■□□□□ 0.82
LSM6-202ENST00000502781 TMEM89A2RUT3 159 aa20.18■□□□□ 0.82
LSM6-202ENST00000502781 A6NDX4 124 aa20.18■□□□□ 0.82
LSM6-202ENST00000502781 HSD17B6O14756 317 aa20.18■□□□□ 0.82
LSM6-202ENST00000502781 PTHLHP12272 177 aa20.18■□□□□ 0.82
LSM6-202ENST00000502781 BRS3P32247 399 aa20.18■□□□□ 0.82
LSM6-202ENST00000502781 CEACAM6P40199 344 aa20.18■□□□□ 0.82
LSM6-202ENST00000502781 MNDAP41218 407 aa20.18■□□□□ 0.82
LSM6-202ENST00000502781 ARHGDIBP52566 201 aa20.18■□□□□ 0.82
LSM6-202ENST00000502781 TAS2R20P59543 309 aa20.18■□□□□ 0.82
LSM6-202ENST00000502781 HABP2Q14520 560 aaPredicted RBP20.18■□□□□ 0.82
LSM6-202ENST00000502781 LY6EQ16553 131 aa20.18■□□□□ 0.82
LSM6-202ENST00000502781 OR2AK2Q8NG84 335 aa20.18■□□□□ 0.82
LSM6-202ENST00000502781 ST6GALNAC5Q9BVH7 336 aa20.18■□□□□ 0.82
LSM6-202ENST00000502781 IFI27L2Q9H2X8 130 aa20.18■□□□□ 0.82
LSM6-202ENST00000502781 FAM90A9PA6NNJ1 464 aa20.17■□□□□ 0.82
LSM6-202ENST00000502781 ZNF701M0R085 212 aaPredicted RBP20.17■□□□□ 0.82
LSM6-202ENST00000502781 GAPDHP04406 335 aaKnown RBP20.17■□□□□ 0.82
LSM6-202ENST00000502781 DTX3Q8N9I9 347 aa20.17■□□□□ 0.82
LSM6-202ENST00000502781 CFHR4Q92496 578 aa20.17■□□□□ 0.82
LSM6-202ENST00000502781 TIMM23O14925 209 aa20.16■□□□□ 0.82
LSM6-202ENST00000502781 HSPA12AO43301 675 aa20.16■□□□□ 0.82
LSM6-202ENST00000502781 HLA-DQB1P01920 261 aa20.16■□□□□ 0.82
LSM6-202ENST00000502781 ACTG1P63261 375 aa20.16■□□□□ 0.82
LSM6-202ENST00000502781 RELBQ01201 579 aa20.16■□□□□ 0.82
LSM6-202ENST00000502781 RTN4IP1Q8WWV3 396 aaPredicted RBP20.16■□□□□ 0.82
LSM6-202ENST00000502781 C1RLQ9NZP8 487 aa20.16■□□□□ 0.82
LSM6-202ENST00000502781 PITPNC1Q9UKF7 332 aa20.16■□□□□ 0.82
LSM6-202ENST00000502781 IGHV1-3A0A0C4DH29 117 aa20.15■□□□□ 0.82
LSM6-202ENST00000502781 CHST1O43916 411 aa20.15■□□□□ 0.82
LSM6-202ENST00000502781 COMPP49747 757 aaPredicted RBP20.15■□□□□ 0.82
LSM6-202ENST00000502781 THNSL2Q86YJ6 484 aa20.15■□□□□ 0.82
LSM6-202ENST00000502781 LYG1Q8N1E2 194 aa20.15■□□□□ 0.82
LSM6-202ENST00000502781 EDARADDQ8WWZ3 215 aa20.15■□□□□ 0.82
LSM6-202ENST00000502781 TAF15Q92804 592 aaKnown RBP eCLIP20.15■□□□□ 0.82
LSM6-202ENST00000502781 SLIRPQ9GZT3 109 aaKnown RBP20.15■□□□□ 0.82
LSM6-202ENST00000502781 C11orf54Q9H0W9 315 aaPredicted RBP20.15■□□□□ 0.82
LSM6-202ENST00000502781 MIXL1Q9H2W2 232 aa20.15■□□□□ 0.82
LSM6-202ENST00000502781 RDH8Q9NYR8 311 aa20.15■□□□□ 0.82
LSM6-202ENST00000502781 RSL24D1Q9UHA3 163 aaKnown RBP20.15■□□□□ 0.82
LSM6-202ENST00000502781 ST8SIA5O15466 376 aa20.14■□□□□ 0.81
LSM6-202ENST00000502781 LANCL1O43813 399 aa20.14■□□□□ 0.81
LSM6-202ENST00000502781 NDUFA7O95182 113 aa20.14■□□□□ 0.81
LSM6-202ENST00000502781 REG1BP48304 166 aa20.14■□□□□ 0.81
LSM6-202ENST00000502781 HOGA1Q86XE5 327 aa20.14■□□□□ 0.81
LSM6-202ENST00000502781 DRAM1Q8N682 238 aa20.14■□□□□ 0.81
LSM6-202ENST00000502781 GCDHQ92947 438 aaPredicted RBP20.14■□□□□ 0.81
LSM6-202ENST00000502781 GHITMQ9H3K2 345 aa20.14■□□□□ 0.81
LSM6-202ENST00000502781 RAB18Q9NP72 206 aa20.14■□□□□ 0.81
LSM6-202ENST00000502781 SMIM31A0A1B0GVY4 71 aa20.13■□□□□ 0.81
LSM6-202ENST00000502781 CTDSP2O14595 271 aa20.13■□□□□ 0.81
LSM6-202ENST00000502781 BET1O15155 118 aa20.13■□□□□ 0.81
LSM6-202ENST00000502781 TXNL1O43396 289 aa20.13■□□□□ 0.81
LSM6-202ENST00000502781 CRYBA1P05813 215 aa20.13■□□□□ 0.81
LSM6-202ENST00000502781 CTXN2P0C2S0 81 aa20.13■□□□□ 0.81
LSM6-202ENST00000502781 CD24P25063 80 aa20.13■□□□□ 0.81
LSM6-202ENST00000502781 CBX5P45973 191 aa20.13■□□□□ 0.81
LSM6-202ENST00000502781 FBLN7Q53RD9 439 aa20.13■□□□□ 0.81
LSM6-202ENST00000502781 CNIH2Q6PI25 160 aa20.13■□□□□ 0.81
LSM6-202ENST00000502781 ZNF833PQ6ZTB9 187 aa20.13■□□□□ 0.81
LSM6-202ENST00000502781 TGIF2LXQ8IUE1 241 aa20.13■□□□□ 0.81
LSM6-202ENST00000502781 GVQW1Q8N7I0 195 aa20.13■□□□□ 0.81
LSM6-202ENST00000502781 OR56B4Q8NH76 319 aa20.13■□□□□ 0.81
LSM6-202ENST00000502781 OR10J5Q8NHC4 309 aa20.13■□□□□ 0.81
LSM6-202ENST00000502781 ZNF251Q9BRH9 671 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms