RNA–Protein interactions for RNA: ENST00000498431.5

MUC1-220, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC1, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-220ENST00000498431 MYL12BO14950 172 aa12.4□□□□□ -0.42
MUC1-220ENST00000498431 SERPINA2P20848 420 aa12.4□□□□□ -0.42
MUC1-220ENST00000498431 BLVRBP30043 206 aaPredicted RBP12.4□□□□□ -0.42
MUC1-220ENST00000498431 GTF2A1P52655 376 aaPredicted RBP12.4□□□□□ -0.42
MUC1-220ENST00000498431 ACTBP60709 375 aa12.4□□□□□ -0.42
MUC1-220ENST00000498431 MRPL28Q13084 256 aaKnown RBP12.4□□□□□ -0.42
MUC1-220ENST00000498431 SRSF7Q16629 238 aaKnown RBP eCLIP12.4□□□□□ -0.42
MUC1-220ENST00000498431 KCTD21Q4G0X4 260 aa12.4□□□□□ -0.42
MUC1-220ENST00000498431 PRR18Q8N4B5 295 aa12.4□□□□□ -0.42
MUC1-220ENST00000498431 ARPC1AQ92747 370 aa12.4□□□□□ -0.42
MUC1-220ENST00000498431 ORAI1Q96D31 301 aa12.4□□□□□ -0.42
MUC1-220ENST00000498431 METTL9Q9H1A3 318 aa12.4□□□□□ -0.42
MUC1-220ENST00000498431 EDA2RQ9HAV5 297 aa12.4□□□□□ -0.42
MUC1-220ENST00000498431 GNG12Q9UBI6 72 aa12.4□□□□□ -0.42
MUC1-220ENST00000498431 IGHV4OR15-8A0A075B7B6 117 aa12.39□□□□□ -0.43
MUC1-220ENST00000498431 A0A087WW49 117 aa12.39□□□□□ -0.43
MUC1-220ENST00000498431 TRAV41A0A0B4J266 112 aa12.39□□□□□ -0.43
MUC1-220ENST00000498431 LANCL1O43813 399 aa12.39□□□□□ -0.43
MUC1-220ENST00000498431 SOX15O60248 233 aa12.39□□□□□ -0.43
MUC1-220ENST00000498431 HLA-DRB1P01911 266 aa12.39□□□□□ -0.43
MUC1-220ENST00000498431 CSTBP04080 98 aaKnown RBP12.39□□□□□ -0.43
MUC1-220ENST00000498431 GBX2P52951 348 aaPredicted RBP12.39□□□□□ -0.43
MUC1-220ENST00000498431 NDPQ00604 133 aa12.39□□□□□ -0.43
MUC1-220ENST00000498431 SYT6Q5T7P8 510 aaPredicted RBP12.39□□□□□ -0.43
MUC1-220ENST00000498431 OR2G6Q5TZ20 316 aa12.39□□□□□ -0.43
MUC1-220ENST00000498431 XAF1Q6GPH4 301 aa12.39□□□□□ -0.43
MUC1-220ENST00000498431 ACSM6Q6P461 480 aa12.39□□□□□ -0.43
MUC1-220ENST00000498431 C5orf24Q7Z6I8 188 aa12.39□□□□□ -0.43
MUC1-220ENST00000498431 HAPLN4Q86UW8 402 aa12.39□□□□□ -0.43
MUC1-220ENST00000498431 NANOGP1Q8N7R0 232 aa12.39□□□□□ -0.43
MUC1-220ENST00000498431 MINDY2Q8NBR6 621 aa12.39□□□□□ -0.43
MUC1-220ENST00000498431 OR4K15Q8NH41 348 aa12.39□□□□□ -0.43
MUC1-220ENST00000498431 TOLLIPQ9H0E2 274 aa12.39□□□□□ -0.43
MUC1-220ENST00000498431 TPSG1Q9NRR2 321 aa12.39□□□□□ -0.43
MUC1-220ENST00000498431 FBXO7Q9Y3I1 522 aa12.39□□□□□ -0.43
MUC1-220ENST00000498431 LINC01619G3V211 115 aa12.38□□□□□ -0.43
MUC1-220ENST00000498431 TNFAIP8O95379 198 aa12.38□□□□□ -0.43
MUC1-220ENST00000498431 HBZP02008 142 aa12.38□□□□□ -0.43
MUC1-220ENST00000498431 RPSAP08865 295 aaKnown RBP12.38□□□□□ -0.43
MUC1-220ENST00000498431 WNT4P56705 351 aa12.38□□□□□ -0.43
MUC1-220ENST00000498431 IRF3Q14653 427 aa12.38□□□□□ -0.43
MUC1-220ENST00000498431 GNMTQ14749 295 aa12.38□□□□□ -0.43
MUC1-220ENST00000498431 MPV17LQ2QL34 196 aa12.38□□□□□ -0.43
MUC1-220ENST00000498431 SLC22A6Q4U2R8 563 aa12.38□□□□□ -0.43
MUC1-220ENST00000498431 C19orf54Q5BKX5 351 aa12.38□□□□□ -0.43
MUC1-220ENST00000498431 DDI2Q5TDH0 399 aa12.38□□□□□ -0.43
MUC1-220ENST00000498431 LINC00596Q86U02 117 aa12.38□□□□□ -0.43
MUC1-220ENST00000498431 OR6Q1Q8NGQ2 317 aa12.38□□□□□ -0.43
MUC1-220ENST00000498431 MND1Q9BWT6 205 aa12.38□□□□□ -0.43
MUC1-220ENST00000498431 MRPL20Q9BYC9 149 aaKnown RBP12.38□□□□□ -0.43
MUC1-220ENST00000498431 BABAM2Q9NXR7 383 aa12.38□□□□□ -0.43
MUC1-220ENST00000498431 NBR2O15453 112 aa12.37□□□□□ -0.43
MUC1-220ENST00000498431 SPINT2O43291 252 aa12.37□□□□□ -0.43
MUC1-220ENST00000498431 IGHV4-30-4P0DP06 118 aa12.37□□□□□ -0.43
MUC1-220ENST00000498431 RCC1P18754 421 aaPredicted RBP12.37□□□□□ -0.43
MUC1-220ENST00000498431 ZNF93P35789 620 aaPredicted RBP12.37□□□□□ -0.43
MUC1-220ENST00000498431 ECSCRQ19T08 205 aa12.37□□□□□ -0.43
MUC1-220ENST00000498431 C5orf64Q2M2E5 130 aa12.37□□□□□ -0.43
MUC1-220ENST00000498431 ODF3L1Q8IXM7 274 aa12.37□□□□□ -0.43
MUC1-220ENST00000498431 Q8N1Y9 231 aa12.37□□□□□ -0.43
MUC1-220ENST00000498431 SVOPQ8N4V2 548 aa12.37□□□□□ -0.43
MUC1-220ENST00000498431 ZNF485Q8NCK3 441 aa12.37□□□□□ -0.43
MUC1-220ENST00000498431 TMEM106AQ96A25 262 aa12.37□□□□□ -0.43
MUC1-220ENST00000498431 ISOC1Q96CN7 298 aa12.37□□□□□ -0.43
MUC1-220ENST00000498431 RCC2Q9P258 522 aaKnown RBP12.37□□□□□ -0.43
MUC1-220ENST00000498431 TRAPPC2LQ9UL33 140 aa12.37□□□□□ -0.43
MUC1-220ENST00000498431 A0A1W2PN81 502 aa12.36□□□□□ -0.43
MUC1-220ENST00000498431 LDLRAD4O15165 306 aa12.36□□□□□ -0.43
MUC1-220ENST00000498431 CHRNA7P36544 502 aa12.36□□□□□ -0.43
MUC1-220ENST00000498431 TAS2R43P59537 309 aa12.36□□□□□ -0.43
MUC1-220ENST00000498431 SPHARQ15513 63 aa12.36□□□□□ -0.43
MUC1-220ENST00000498431 TBCEQ15813 527 aaPredicted RBP12.36□□□□□ -0.43
MUC1-220ENST00000498431 CCDC58Q4VC31 144 aa12.36□□□□□ -0.43
MUC1-220ENST00000498431 ZNF773Q6PK81 442 aa12.36□□□□□ -0.43
MUC1-220ENST00000498431 GPR148Q8TDV2 347 aa12.36□□□□□ -0.43
MUC1-220ENST00000498431 NABP2Q9BQ15 211 aa12.36□□□□□ -0.43
MUC1-220ENST00000498431 ZNF251Q9BRH9 671 aa12.36□□□□□ -0.43
MUC1-220ENST00000498431 TMEM138Q9NPI0 162 aa12.36□□□□□ -0.43
MUC1-220ENST00000498431 ETAA1Q9NY74 926 aa12.36□□□□□ -0.43
MUC1-220ENST00000498431 LGALS1P09382 135 aaKnown RBP12.35□□□□□ -0.43
MUC1-220ENST00000498431 GTF2F2P13984 249 aa12.35□□□□□ -0.43
MUC1-220ENST00000498431 BDKRB2P30411 391 aa12.35□□□□□ -0.43
MUC1-220ENST00000498431 PPP1CCP36873 323 aaKnown RBP12.35□□□□□ -0.43
MUC1-220ENST00000498431 MAP2K4P45985 399 aa12.35□□□□□ -0.43
MUC1-220ENST00000498431 MORN2Q502X0 79 aa12.35□□□□□ -0.43
MUC1-220ENST00000498431 C6orf183Q5T699 404 aa12.35□□□□□ -0.43
MUC1-220ENST00000498431 STEAP3Q658P3 488 aa12.35□□□□□ -0.43
MUC1-220ENST00000498431 LIN54Q6MZP7 749 aa12.35□□□□□ -0.43
MUC1-220ENST00000498431 RPL22L1Q6P5R6 122 aaKnown RBP12.35□□□□□ -0.43
MUC1-220ENST00000498431 SPARTQ8N0X7 666 aa12.35□□□□□ -0.43
MUC1-220ENST00000498431 GAPTQ8N292 157 aa12.35□□□□□ -0.43
MUC1-220ENST00000498431 OR52L2PQ8NGH6 319 aa12.35□□□□□ -0.43
MUC1-220ENST00000498431 OR13C5Q8NGS8 318 aa12.35□□□□□ -0.43
MUC1-220ENST00000498431 S100A13Q99584 98 aa12.35□□□□□ -0.43
MUC1-220ENST00000498431 GHITMQ9H3K2 345 aa12.35□□□□□ -0.43
MUC1-220ENST00000498431 OR2S2Q9NQN1 319 aa12.35□□□□□ -0.43
MUC1-220ENST00000498431 C19orf73Q9NVV2 129 aa12.35□□□□□ -0.43
MUC1-220ENST00000498431 LSM2Q9Y333 95 aaKnown RBP12.35□□□□□ -0.43
MUC1-220ENST00000498431 A3GALT2U3KPV4 340 aa12.35□□□□□ -0.43
MUC1-220ENST00000498431 ALMS1Q8TCU4 4167 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms