RNA–Protein interactions for RNA: ENST00000498213.1

USP54-217, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 815 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-217ENST00000498213 SNAPC1Q16533 368 aa3.01□□□□□ -1.93
USP54-217ENST00000498213 MOGAT2Q3SYC2 334 aa3.01□□□□□ -1.93
USP54-217ENST00000498213 ZFP1Q6P2D0 407 aa3.01□□□□□ -1.93
USP54-217ENST00000498213 HAGHLQ6PII5 290 aaPredicted RBP3.01□□□□□ -1.93
USP54-217ENST00000498213 IZUMO2Q6UXV1 221 aa3.01□□□□□ -1.93
USP54-217ENST00000498213 UTS2BQ765I0 119 aa3.01□□□□□ -1.93
USP54-217ENST00000498213 ZNF554Q86TJ5 538 aa3.01□□□□□ -1.93
USP54-217ENST00000498213 NAA40Q86UY6 237 aa3.01□□□□□ -1.93
USP54-217ENST00000498213 LYPD6Q86Y78 171 aa3.01□□□□□ -1.93
USP54-217ENST00000498213 TGIF2LXQ8IUE1 241 aa3.01□□□□□ -1.93
USP54-217ENST00000498213 ERI1Q8IV48 349 aaKnown RBP3.01□□□□□ -1.93
USP54-217ENST00000498213 ZNF695Q8IW36 515 aa3.01□□□□□ -1.93
USP54-217ENST00000498213 ELMOD2Q8IZ81 293 aa3.01□□□□□ -1.93
USP54-217ENST00000498213 PNKDQ8N490 385 aa3.01□□□□□ -1.93
USP54-217ENST00000498213 DRAM1Q8N682 238 aa3.01□□□□□ -1.93
USP54-217ENST00000498213 OR4D6Q8NGJ1 314 aa3.01□□□□□ -1.93
USP54-217ENST00000498213 OR52M1Q8NGK5 317 aa3.01□□□□□ -1.93
USP54-217ENST00000498213 OR4P4Q8NGL7 312 aa3.01□□□□□ -1.93
USP54-217ENST00000498213 OR6K6Q8NGW6 343 aa3.01□□□□□ -1.93
USP54-217ENST00000498213 OR6N2Q8NGY6 317 aa3.01□□□□□ -1.93
USP54-217ENST00000498213 OR9G1Q8NH87 305 aa3.01□□□□□ -1.93
USP54-217ENST00000498213 PIGCQ92535 297 aa3.01□□□□□ -1.93
USP54-217ENST00000498213 RPL3LQ92901 407 aaKnown RBP3.01□□□□□ -1.93
USP54-217ENST00000498213 MYDGFQ969H8 173 aa3.01□□□□□ -1.93
USP54-217ENST00000498213 MRPL48Q96GC5 212 aaKnown RBP3.01□□□□□ -1.93
USP54-217ENST00000498213 CEP19Q96LK0 163 aa3.01□□□□□ -1.93
USP54-217ENST00000498213 OR8B4Q96RC9 309 aa3.01□□□□□ -1.93
USP54-217ENST00000498213 TSSK6Q9BXA6 273 aa3.01□□□□□ -1.93
USP54-217ENST00000498213 CHST5Q9GZS9 411 aa3.01□□□□□ -1.93
USP54-217ENST00000498213 WDR13Q9H1Z4 485 aa3.01□□□□□ -1.93
USP54-217ENST00000498213 GHITMQ9H3K2 345 aa3.01□□□□□ -1.93
USP54-217ENST00000498213 C19orf12Q9NSK7 152 aa3.01□□□□□ -1.93
USP54-217ENST00000498213 FAM206AQ9NX38 181 aa3.01□□□□□ -1.93
USP54-217ENST00000498213 LAMP5Q9UJQ1 280 aa3.01□□□□□ -1.93
USP54-217ENST00000498213 V9GYS6 101 aa3.01□□□□□ -1.93
USP54-217ENST00000498213 APOBP04114 4563 aaKnown RBP3.01□□□□□ -1.93
USP54-217ENST00000498213 FLG2Q5D862 2391 aaPredicted RBP3.01□□□□□ -1.93
USP54-217ENST00000498213 IGHV3OR15-7A0A075B7D8 119 aa3□□□□□ -1.93
USP54-217ENST00000498213 IGHV3-64DA0A0J9YX35 117 aa3□□□□□ -1.93
USP54-217ENST00000498213 A0A1W2PRD5 423 aa3□□□□□ -1.93
USP54-217ENST00000498213 A0A1W2PRF3 423 aa3□□□□□ -1.93
USP54-217ENST00000498213 A0A1W2PRM7 423 aa3□□□□□ -1.93
USP54-217ENST00000498213 SNTNA6NMZ2 147 aa3□□□□□ -1.93
USP54-217ENST00000498213 LY6LH3BQJ8 138 aa3□□□□□ -1.93
USP54-217ENST00000498213 BUB1B-PAK6H3BSN5 160 aa3□□□□□ -1.93
USP54-217ENST00000498213 TOR1AO14656 332 aa3□□□□□ -1.93
USP54-217ENST00000498213 EI24O14681 340 aa3□□□□□ -1.93
USP54-217ENST00000498213 SH2D1BO14796 132 aa3□□□□□ -1.93
USP54-217ENST00000498213 MITFO75030 526 aaPredicted RBP3□□□□□ -1.93
USP54-217ENST00000498213 CA11O75493 328 aa3□□□□□ -1.93
USP54-217ENST00000498213 ISG15P05161 165 aa3□□□□□ -1.93
USP54-217ENST00000498213 TFAP2AP05549 437 aa3□□□□□ -1.93
USP54-217ENST00000498213 OR8U8P0C7N1 319 aa3□□□□□ -1.93
USP54-217ENST00000498213 UBCP0CG48 685 aaKnown RBP3□□□□□ -1.93
USP54-217ENST00000498213 INAFM2P0DMQ5 153 aa3□□□□□ -1.93
USP54-217ENST00000498213 PRB4P10163 310 aaPredicted RBP3□□□□□ -1.93
USP54-217ENST00000498213 SLC2A1P11166 492 aa3□□□□□ -1.93
USP54-217ENST00000498213 GZMHP20718 246 aa3□□□□□ -1.93
USP54-217ENST00000498213 ACKR3P25106 362 aa3□□□□□ -1.93
USP54-217ENST00000498213 PTGFRP43088 359 aa3□□□□□ -1.93
USP54-217ENST00000498213 OR3A4PP47883 348 aa3□□□□□ -1.93
USP54-217ENST00000498213 RBP2P50120 134 aa3□□□□□ -1.93
USP54-217ENST00000498213 CD81P60033 236 aa3□□□□□ -1.93
USP54-217ENST00000498213 KRTAP10-12P60413 245 aa3□□□□□ -1.93
USP54-217ENST00000498213 CDK5Q00535 292 aa3□□□□□ -1.93
USP54-217ENST00000498213 PRB3Q04118 309 aaPredicted RBP3□□□□□ -1.93
USP54-217ENST00000498213 ZNF816Q0VGE8 651 aaPredicted RBP3□□□□□ -1.93
USP54-217ENST00000498213 HLA-DRB5Q30154 266 aa3□□□□□ -1.93
USP54-217ENST00000498213 FAM27D1Q5T7N8 215 aa3□□□□□ -1.93
USP54-217ENST00000498213 NXNL2Q5VZ03 156 aa3□□□□□ -1.93
USP54-217ENST00000498213 PLCXD3Q63HM9 321 aa3□□□□□ -1.93
USP54-217ENST00000498213 OR2T5Q6IEZ7 315 aa3□□□□□ -1.93
USP54-217ENST00000498213 PYHIN1Q6K0P9 492 aa3□□□□□ -1.93
USP54-217ENST00000498213 OR2W3Q7Z3T1 314 aa3□□□□□ -1.93
USP54-217ENST00000498213 LINC00596Q86U02 117 aa3□□□□□ -1.93
USP54-217ENST00000498213 GID4Q8IVV7 300 aa3□□□□□ -1.93
USP54-217ENST00000498213 ABHD12Q8N2K0 398 aa3□□□□□ -1.93
USP54-217ENST00000498213 CBR4Q8N4T8 237 aa3□□□□□ -1.93
USP54-217ENST00000498213 LINC00311Q8N616 119 aa3□□□□□ -1.93
USP54-217ENST00000498213 CD177Q8N6Q3 437 aa3□□□□□ -1.93
USP54-217ENST00000498213 ZNF676Q8N7Q3 588 aa3□□□□□ -1.93
USP54-217ENST00000498213 TMEM116Q8NCL8 245 aa3□□□□□ -1.93
USP54-217ENST00000498213 C19orf18Q8NEA5 215 aa3□□□□□ -1.93
USP54-217ENST00000498213 OR8B12Q8NGG6 310 aa3□□□□□ -1.93
USP54-217ENST00000498213 OR2T29Q8NH02 315 aa3□□□□□ -1.93
USP54-217ENST00000498213 OR4Q3Q8NH05 313 aa3□□□□□ -1.93
USP54-217ENST00000498213 OR52J3Q8NH60 311 aa3□□□□□ -1.93
USP54-217ENST00000498213 NDNFQ8TB73 568 aa3□□□□□ -1.93
USP54-217ENST00000498213 MRGPRDQ8TDS7 321 aa3□□□□□ -1.93
USP54-217ENST00000498213 C4orf3Q8WVX3 66 aa3□□□□□ -1.93
USP54-217ENST00000498213 RPEQ96AT9 228 aa3□□□□□ -1.93
USP54-217ENST00000498213 CENPNQ96H22 339 aaPredicted RBP3□□□□□ -1.93
USP54-217ENST00000498213 UBE2E2Q96LR5 201 aa3□□□□□ -1.93
USP54-217ENST00000498213 C18orf15Q96N68 181 aa3□□□□□ -1.93
USP54-217ENST00000498213 MBOAT4Q96T53 435 aa3□□□□□ -1.93
USP54-217ENST00000498213 CIB1Q99828 191 aa3□□□□□ -1.93
USP54-217ENST00000498213 TM2D3Q9BRN9 247 aa3□□□□□ -1.93
USP54-217ENST00000498213 ST6GALNAC5Q9BVH7 336 aa3□□□□□ -1.93
USP54-217ENST00000498213 PBOV1Q9GZY1 135 aa3□□□□□ -1.93
USP54-217ENST00000498213 COMMD4Q9H0A8 199 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms