RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 CPNE2Q96FN4 548 aaPredicted RBP1.14□□□□□ -2.23
XRN1-214ENST00000498077 RBM15Q96T37 977 aaKnown RBP eCLIP1.14□□□□□ -2.23
XRN1-214ENST00000498077 RETNLBQ9BQ08 111 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 TTTY13Q9BZ97 58 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 ARV1Q9H2C2 271 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 OR51B6Q9H340 312 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 OR51I1Q9H343 314 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 PLEKHF2Q9H8W4 249 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 SLC35A3Q9Y2D2 325 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 CLIC4Q9Y696 253 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 ATAD5Q96QE3 1844 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 CCDC195A0A1B0GUA6 201 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 ZNF737O75373 536 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 ATP1B1P05026 303 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 RRASP10301 218 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 ATP1B2P14415 290 aaPredicted RBP1.14□□□□□ -2.23
XRN1-214ENST00000498077 FOLR1P15328 257 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 EFNA1P20827 205 aaPredicted RBP1.14□□□□□ -2.23
XRN1-214ENST00000498077 HOXC9P31274 260 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 SPP2Q13103 211 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 SPCS2Q15005 226 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 DEFB116Q30KQ4 102 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 HSP90AB2PQ58FF8 381 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 WDR38Q5JTN6 314 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 C1orf194Q5T5A4 169 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 FBXW12Q6X9E4 464 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 TRMT10CQ7L0Y3 403 aaKnown RBP1.14□□□□□ -2.23
XRN1-214ENST00000498077 FAM131BQ86XD5 332 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 SCML4Q8N228 414 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 SLC30A7Q8NEW0 376 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 C16orf78Q8WTQ4 265 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 CCDC107Q8WV48 283 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 GTSF1Q8WW33 167 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 CAPSLQ8WWF8 208 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 ASB13Q8WXK3 278 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 OSTF1Q92882 214 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 SMIM8Q96KF7 97 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 AQP10Q96PS8 301 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 CRB3Q9BUF7 120 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 C1orf50Q9BV19 199 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 ARL6Q9H0F7 186 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 REEP4Q9H6H4 257 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 DCTPP1Q9H773 170 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 DDX31Q9H8H2 851 aaKnown RBP1.14□□□□□ -2.23
XRN1-214ENST00000498077 MLXIPLQ9NP71 852 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 CHMP5Q9NZZ3 219 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 DOK5Q9P104 306 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 CRLS1Q9UJA2 301 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 LSM7Q9UK45 103 aaKnown RBP1.14□□□□□ -2.23
XRN1-214ENST00000498077 HHLA2Q9UM44 414 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 USP16Q9Y5T5 823 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 MDC1Q14676 2089 aaKnown RBP1.14□□□□□ -2.23
XRN1-214ENST00000498077 EDDM13A0A1B0GTR0 161 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 ZNF879B4DU55 563 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 RNASEH1O60930 286 aaKnown RBP1.14□□□□□ -2.23
XRN1-214ENST00000498077 NOL3O60936 208 aaKnown RBP1.14□□□□□ -2.23
XRN1-214ENST00000498077 PPP1R3DO95685 299 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 CD5P06127 495 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 CSH1P0DML2 217 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 CSH2P0DML3 217 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 IL10P22301 178 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 FDFT1P37268 417 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 WNT5AP41221 380 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 GUCA1AP43080 201 aaPredicted RBP1.14□□□□□ -2.23
XRN1-214ENST00000498077 SUB1P53999 127 aaKnown RBP eCLIP1.14□□□□□ -2.23
XRN1-214ENST00000498077 GFERP55789 205 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 DCDP81605 110 aaKnown RBP1.14□□□□□ -2.23
XRN1-214ENST00000498077 FASTKQ14296 549 aaKnown RBP1.14□□□□□ -2.23
XRN1-214ENST00000498077 C10orf128Q5T292 105 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 SPATA31B1PQ5VZV4 182 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 PDPK2PQ6A1A2 396 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 MED27Q6P2C8 311 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 SSX7Q7RTT5 188 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 KLHDC8BQ8IXV7 354 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 ZNF595Q8IYB9 648 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 ZNF679Q8IYX0 411 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 CHST4Q8NCG5 386 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 SLC25A36Q96CQ1 311 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 RASD2Q96D21 266 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 CMTM5Q96DZ9 223 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 RIT2Q99578 217 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 RBM4BQ9BQ04 359 aaKnown RBP1.14□□□□□ -2.23
XRN1-214ENST00000498077 BPIFA3Q9BQP9 254 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 MEPEQ9NQ76 525 aaPredicted RBP1.14□□□□□ -2.23
XRN1-214ENST00000498077 SIRT3Q9NTG7 399 aaPredicted RBP1.14□□□□□ -2.23
XRN1-214ENST00000498077 APOBEC3BQ9UH17 382 aaKnown RBP1.14□□□□□ -2.23
XRN1-214ENST00000498077 MLXQ9UH92 298 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 ERG28Q9UKR5 140 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 ZNF490Q9ULM2 529 aaPredicted RBP1.14□□□□□ -2.23
XRN1-214ENST00000498077 PRKAB1Q9Y478 270 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 RELNP78509 3460 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 TRGV4A0A0C4DH28 118 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 IGHV1-18A0A0C4DH31 117 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 A0A0J9YX75 114 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP1.14□□□□□ -2.23
XRN1-214ENST00000498077 C12orf71A8MTZ7 269 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 ZNF587BE7ETH6 402 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 ADAMDEC1O15204 470 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 TMPRSS11DO60235 418 aa1.14□□□□□ -2.23
XRN1-214ENST00000498077 SMIM24O75264 130 aa1.14□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms