RNA–Protein interactions for RNA: ENST00000497993.5

TMEM39A-212, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 590 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-212ENST00000497993 GMDSO60547 372 aa4.73□□□□□ -1.65
TMEM39A-212ENST00000497993 SRSF10O75494 262 aaKnown RBP4.73□□□□□ -1.65
TMEM39A-212ENST00000497993 CST4P01036 141 aa4.73□□□□□ -1.65
TMEM39A-212ENST00000497993 ALPLP05186 524 aa4.73□□□□□ -1.65
TMEM39A-212ENST00000497993 MSMBP08118 114 aa4.73□□□□□ -1.65
TMEM39A-212ENST00000497993 ZNF823P16415 610 aa4.73□□□□□ -1.65
TMEM39A-212ENST00000497993 ALOX5APP20292 161 aa4.73□□□□□ -1.65
TMEM39A-212ENST00000497993 PRKACGP22612 351 aa4.73□□□□□ -1.65
TMEM39A-212ENST00000497993 CFL1P23528 166 aaKnown RBP4.73□□□□□ -1.65
TMEM39A-212ENST00000497993 FASP25445 335 aa4.73□□□□□ -1.65
TMEM39A-212ENST00000497993 PSMB6P28072 239 aa4.73□□□□□ -1.65
TMEM39A-212ENST00000497993 PYCR1P32322 319 aa4.73□□□□□ -1.65
TMEM39A-212ENST00000497993 ERFP50548 548 aa4.73□□□□□ -1.65
TMEM39A-212ENST00000497993 CRISP1P54107 249 aa4.73□□□□□ -1.65
TMEM39A-212ENST00000497993 TNFAIP6P98066 277 aaPredicted RBP4.73□□□□□ -1.65
TMEM39A-212ENST00000497993 PAX2Q02962 417 aa4.73□□□□□ -1.65
TMEM39A-212ENST00000497993 SNCBQ16143 134 aa4.73□□□□□ -1.65
TMEM39A-212ENST00000497993 ODF3L2Q3SX64 289 aa4.73□□□□□ -1.65
TMEM39A-212ENST00000497993 KLHL12Q53G59 568 aa4.73□□□□□ -1.65
TMEM39A-212ENST00000497993 PAN3Q58A45 887 aaKnown RBP4.73□□□□□ -1.65
TMEM39A-212ENST00000497993 SPRNQ5BIV9 151 aa4.73□□□□□ -1.65
TMEM39A-212ENST00000497993 ZNF684Q5T5D7 378 aa4.73□□□□□ -1.65
TMEM39A-212ENST00000497993 NXNL2Q5VZ03 156 aa4.73□□□□□ -1.65
TMEM39A-212ENST00000497993 ZFP1Q6P2D0 407 aa4.73□□□□□ -1.65
TMEM39A-212ENST00000497993 TMPRSS11AQ6ZMR5 421 aa4.73□□□□□ -1.65
TMEM39A-212ENST00000497993 LRRC28Q86X40 367 aaPredicted RBP4.73□□□□□ -1.65
TMEM39A-212ENST00000497993 LINC01561Q8N1V8 128 aa4.73□□□□□ -1.65
TMEM39A-212ENST00000497993 MTURNQ8N3F0 131 aa4.73□□□□□ -1.65
TMEM39A-212ENST00000497993 OR52H1Q8NGJ2 320 aa4.73□□□□□ -1.65
TMEM39A-212ENST00000497993 OR9Q1Q8NGQ5 310 aa4.73□□□□□ -1.65
TMEM39A-212ENST00000497993 OR51F2Q8NH61 342 aa4.73□□□□□ -1.65
TMEM39A-212ENST00000497993 SLAMF6Q96DU3 332 aa4.73□□□□□ -1.65
TMEM39A-212ENST00000497993 PITX2Q99697 317 aa4.73□□□□□ -1.65
TMEM39A-212ENST00000497993 ATP5SQ99766 215 aa4.73□□□□□ -1.65
TMEM39A-212ENST00000497993 SAV1Q9H4B6 383 aaPredicted RBP4.73□□□□□ -1.65
TMEM39A-212ENST00000497993 SP140LQ9H930 580 aa4.73□□□□□ -1.65
TMEM39A-212ENST00000497993 ZNF556Q9HAH1 456 aa4.73□□□□□ -1.65
TMEM39A-212ENST00000497993 VCX3AQ9NNX9 186 aa4.73□□□□□ -1.65
TMEM39A-212ENST00000497993 ABCB9Q9NP78 766 aa4.73□□□□□ -1.65
TMEM39A-212ENST00000497993 TMEM106BQ9NUM4 274 aa4.73□□□□□ -1.65
TMEM39A-212ENST00000497993 KIF25Q9UIL4 384 aa4.73□□□□□ -1.65
TMEM39A-212ENST00000497993 FBN3Q75N90 2809 aa4.73□□□□□ -1.65
TMEM39A-212ENST00000497993 C5orf63A6NC05 138 aa4.72□□□□□ -1.65
TMEM39A-212ENST00000497993 DHRS7CA6NNS2 312 aa4.72□□□□□ -1.65
TMEM39A-212ENST00000497993 CD300LBA8K4G0 201 aa4.72□□□□□ -1.65
TMEM39A-212ENST00000497993 LYNX1G3V0Z9 82 aa4.72□□□□□ -1.65
TMEM39A-212ENST00000497993 ZNF593O00488 134 aaPredicted RBP4.72□□□□□ -1.65
TMEM39A-212ENST00000497993 TOR1AO14656 332 aa4.72□□□□□ -1.65
TMEM39A-212ENST00000497993 FADS2O95864 444 aaKnown RBP4.72□□□□□ -1.65
TMEM39A-212ENST00000497993 IGHV4-59P01825 116 aa4.72□□□□□ -1.65
TMEM39A-212ENST00000497993 OCMP0CE72 109 aaPredicted RBP4.72□□□□□ -1.65
TMEM39A-212ENST00000497993 IGHV4-38-2P0DP08 117 aa4.72□□□□□ -1.65
TMEM39A-212ENST00000497993 LYNX1P0DP58 116 aa4.72□□□□□ -1.65
TMEM39A-212ENST00000497993 VHLP40337 213 aa4.72□□□□□ -1.65
TMEM39A-212ENST00000497993 MDH2P40926 338 aaKnown RBP4.72□□□□□ -1.65
TMEM39A-212ENST00000497993 SRP9P49458 86 aaKnown RBP4.72□□□□□ -1.65
TMEM39A-212ENST00000497993 FAM3AP98173 230 aa4.72□□□□□ -1.65
TMEM39A-212ENST00000497993 ZNF92Q03936 586 aa4.72□□□□□ -1.65
TMEM39A-212ENST00000497993 ARL16Q0P5N6 197 aa4.72□□□□□ -1.65
TMEM39A-212ENST00000497993 GINS1Q14691 196 aa4.72□□□□□ -1.65
TMEM39A-212ENST00000497993 GNMTQ14749 295 aa4.72□□□□□ -1.65
TMEM39A-212ENST00000497993 PTGES3Q15185 160 aaKnown RBP4.72□□□□□ -1.65
TMEM39A-212ENST00000497993 ZNF404Q494X3 552 aa4.72□□□□□ -1.65
TMEM39A-212ENST00000497993 FAM120AOSQ5T036 256 aa4.72□□□□□ -1.65
TMEM39A-212ENST00000497993 C1orf146Q5VVC0 180 aa4.72□□□□□ -1.65
TMEM39A-212ENST00000497993 OTPQ5XKR4 325 aa4.72□□□□□ -1.65
TMEM39A-212ENST00000497993 SLC25A48Q6ZT89 311 aaKnown RBP4.72□□□□□ -1.65
TMEM39A-212ENST00000497993 USP43Q70EL4 1123 aa4.72□□□□□ -1.65
TMEM39A-212ENST00000497993 BPIFB2Q8N4F0 458 aa4.72□□□□□ -1.65
TMEM39A-212ENST00000497993 SPICQ8N5J4 248 aa4.72□□□□□ -1.65
TMEM39A-212ENST00000497993 IQCF1Q8N6M8 205 aa4.72□□□□□ -1.65
TMEM39A-212ENST00000497993 TPRX1Q8N7U7 411 aa4.72□□□□□ -1.65
TMEM39A-212ENST00000497993 SPATA3Q8NHX4 192 aa4.72□□□□□ -1.65
TMEM39A-212ENST00000497993 ITLN1Q8WWA0 313 aa4.72□□□□□ -1.65
TMEM39A-212ENST00000497993 C2orf48Q96LS8 159 aa4.72□□□□□ -1.65
TMEM39A-212ENST00000497993 OR2V2Q96R30 315 aa4.72□□□□□ -1.65
TMEM39A-212ENST00000497993 AMELYQ99218 206 aa4.72□□□□□ -1.65
TMEM39A-212ENST00000497993 OR51B6Q9H340 312 aa4.72□□□□□ -1.65
TMEM39A-212ENST00000497993 OR51M1Q9H341 326 aa4.72□□□□□ -1.65
TMEM39A-212ENST00000497993 MOB1AQ9H8S9 216 aa4.72□□□□□ -1.65
TMEM39A-212ENST00000497993 PLEKHA3Q9HB20 300 aa4.72□□□□□ -1.65
TMEM39A-212ENST00000497993 PATZ1Q9HBE1 687 aaKnown RBP4.72□□□□□ -1.65
TMEM39A-212ENST00000497993 KAAG1Q9UBP8 84 aa4.72□□□□□ -1.65
TMEM39A-212ENST00000497993 KLK11Q9UBX7 282 aa4.72□□□□□ -1.65
TMEM39A-212ENST00000497993 TCF19Q9Y242 345 aa4.72□□□□□ -1.65
TMEM39A-212ENST00000497993 PCDHGB1Q9Y5G3 927 aa4.72□□□□□ -1.65
TMEM39A-212ENST00000497993 PUS1Q9Y606 427 aaKnown RBP eCLIP4.72□□□□□ -1.65
TMEM39A-212ENST00000497993 CACNG2Q9Y698 323 aa4.72□□□□□ -1.65
TMEM39A-212ENST00000497993 TMEM14AQ9Y6G1 99 aa4.72□□□□□ -1.65
TMEM39A-212ENST00000497993 TVP23AA6NH52 213 aa4.71□□□□□ -1.66
TMEM39A-212ENST00000497993 FAM183AA6NL82 134 aa4.71□□□□□ -1.66
TMEM39A-212ENST00000497993 F5H5K5 113 aa4.71□□□□□ -1.66
TMEM39A-212ENST00000497993 G3V2T6 193 aa4.71□□□□□ -1.66
TMEM39A-212ENST00000497993 RNASEK-C17orf49H0YIS7 233 aa4.71□□□□□ -1.66
TMEM39A-212ENST00000497993 H3BMQ9 156 aa4.71□□□□□ -1.66
TMEM39A-212ENST00000497993 H3BN98 237 aa4.71□□□□□ -1.66
TMEM39A-212ENST00000497993 J3QRE1 110 aa4.71□□□□□ -1.66
TMEM39A-212ENST00000497993 GNGT2O14610 69 aa4.71□□□□□ -1.66
TMEM39A-212ENST00000497993 PHYHO14832 338 aa4.71□□□□□ -1.66
TMEM39A-212ENST00000497993 SULT1B1O43704 296 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms