RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 ARFRP1Q13795 201 aa12.29□□□□□ -0.44
NUP50-219ENST00000497960 HABP2Q14520 560 aaPredicted RBP12.29□□□□□ -0.44
NUP50-219ENST00000497960 UTF1Q5T230 341 aa12.29□□□□□ -0.44
NUP50-219ENST00000497960 IZUMO1Q8IYV9 350 aa12.29□□□□□ -0.44
NUP50-219ENST00000497960 LEAP2Q969E1 77 aa12.29□□□□□ -0.44
NUP50-219ENST00000497960 TOMM40LQ969M1 308 aa12.29□□□□□ -0.44
NUP50-219ENST00000497960 ARL11Q969Q4 196 aa12.29□□□□□ -0.44
NUP50-219ENST00000497960 S100A16Q96FQ6 103 aaKnown RBP12.29□□□□□ -0.44
NUP50-219ENST00000497960 ADAM30Q9UKF2 790 aa12.29□□□□□ -0.44
NUP50-219ENST00000497960 PSG11Q9UQ72 335 aa12.29□□□□□ -0.44
NUP50-219ENST00000497960 PKD1L1Q8TDX9 2849 aa12.29□□□□□ -0.44
NUP50-219ENST00000497960 TRAV18A0A075B6X5 111 aa12.28□□□□□ -0.44
NUP50-219ENST00000497960 TMEM235A6NFC5 223 aa12.28□□□□□ -0.44
NUP50-219ENST00000497960 APOA1P02647 267 aa12.28□□□□□ -0.44
NUP50-219ENST00000497960 GSTP1P09211 210 aaKnown RBP12.28□□□□□ -0.44
NUP50-219ENST00000497960 GNG10P50151 68 aa12.28□□□□□ -0.44
NUP50-219ENST00000497960 GNG2P59768 71 aa12.28□□□□□ -0.44
NUP50-219ENST00000497960 BLCAPP62952 87 aa12.28□□□□□ -0.44
NUP50-219ENST00000497960 MADCAM1Q13477 382 aa12.28□□□□□ -0.44
NUP50-219ENST00000497960 CDNFQ49AH0 187 aa12.28□□□□□ -0.44
NUP50-219ENST00000497960 TMEM69Q5SWH9 247 aa12.28□□□□□ -0.44
NUP50-219ENST00000497960 FOXB2Q5VYV0 432 aa12.28□□□□□ -0.44
NUP50-219ENST00000497960 GAPTQ8N292 157 aa12.28□□□□□ -0.44
NUP50-219ENST00000497960 PRR18Q8N4B5 295 aa12.28□□□□□ -0.44
NUP50-219ENST00000497960 C11orf44Q8N8P7 122 aa12.28□□□□□ -0.44
NUP50-219ENST00000497960 OR10X1Q8NGY0 326 aa12.28□□□□□ -0.44
NUP50-219ENST00000497960 CFHR4Q92496 578 aa12.28□□□□□ -0.44
NUP50-219ENST00000497960 DGCR14Q96DF8 476 aaKnown RBP12.28□□□□□ -0.44
NUP50-219ENST00000497960 CMTM3Q96MX0 182 aa12.28□□□□□ -0.44
NUP50-219ENST00000497960 RIMS4Q9H426 269 aaPredicted RBP12.28□□□□□ -0.44
NUP50-219ENST00000497960 RAB9BQ9NP90 201 aa12.28□□□□□ -0.44
NUP50-219ENST00000497960 SERTAD4Q9NUC0 356 aa12.28□□□□□ -0.44
NUP50-219ENST00000497960 KCNIP1Q9NZI2 227 aa12.28□□□□□ -0.44
NUP50-219ENST00000497960 KCNK7Q9Y2U2 307 aa12.28□□□□□ -0.44
NUP50-219ENST00000497960 TET2Q6N021 2002 aaPredicted RBP12.28□□□□□ -0.44
NUP50-219ENST00000497960 ORC5O43913 435 aa12.27□□□□□ -0.45
NUP50-219ENST00000497960 FBXO24O75426 580 aa12.27□□□□□ -0.45
NUP50-219ENST00000497960 OR2F2O95006 317 aa12.27□□□□□ -0.45
NUP50-219ENST00000497960 TSPAN15O95858 294 aa12.27□□□□□ -0.45
NUP50-219ENST00000497960 NAPSAO96009 420 aa12.27□□□□□ -0.45
NUP50-219ENST00000497960 FAM106CPP0CH98 169 aa12.27□□□□□ -0.45
NUP50-219ENST00000497960 RCC1P18754 421 aaPredicted RBP12.27□□□□□ -0.45
NUP50-219ENST00000497960 ELK1P19419 428 aa12.27□□□□□ -0.45
NUP50-219ENST00000497960 TALDO1P37837 337 aa12.27□□□□□ -0.45
NUP50-219ENST00000497960 VDAC2P45880 294 aaPredicted RBP12.27□□□□□ -0.45
NUP50-219ENST00000497960 ZNF260Q3ZCT1 412 aa12.27□□□□□ -0.45
NUP50-219ENST00000497960 OR52M1Q8NGK5 317 aa12.27□□□□□ -0.45
NUP50-219ENST00000497960 MCFD2Q8NI22 146 aa12.27□□□□□ -0.45
NUP50-219ENST00000497960 FAM110DQ8TAY7 271 aaPredicted RBP12.27□□□□□ -0.45
NUP50-219ENST00000497960 UBALD1Q8TB05 177 aa12.27□□□□□ -0.45
NUP50-219ENST00000497960 NUDCD2Q8WVJ2 157 aa12.27□□□□□ -0.45
NUP50-219ENST00000497960 RBM14Q96PK6 669 aaKnown RBP12.27□□□□□ -0.45
NUP50-219ENST00000497960 SLC25A33Q9BSK2 321 aa12.27□□□□□ -0.45
NUP50-219ENST00000497960 SLIRPQ9GZT3 109 aaKnown RBP12.27□□□□□ -0.45
NUP50-219ENST00000497960 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.27□□□□□ -0.45
NUP50-219ENST00000497960 C12orf77C9JDV5 145 aa12.26□□□□□ -0.45
NUP50-219ENST00000497960 C15orf65H3BRN8 121 aa12.26□□□□□ -0.45
NUP50-219ENST00000497960 M0QZK8 103 aa12.26□□□□□ -0.45
NUP50-219ENST00000497960 SDCBPO00560 298 aaPredicted RBP12.26□□□□□ -0.45
NUP50-219ENST00000497960 SPINT2O43291 252 aa12.26□□□□□ -0.45
NUP50-219ENST00000497960 XRCC3O43542 346 aa12.26□□□□□ -0.45
NUP50-219ENST00000497960 FCGR3AP08637 254 aa12.26□□□□□ -0.45
NUP50-219ENST00000497960 RAB7AP51149 207 aa12.26□□□□□ -0.45
NUP50-219ENST00000497960 TAS2R20P59543 309 aa12.26□□□□□ -0.45
NUP50-219ENST00000497960 HLA-DRB3P79483 266 aa12.26□□□□□ -0.45
NUP50-219ENST00000497960 PNLIPRP3Q17RR3 467 aa12.26□□□□□ -0.45
NUP50-219ENST00000497960 HACD4Q5VWC8 232 aa12.26□□□□□ -0.45
NUP50-219ENST00000497960 LAX1Q8IWV1 398 aa12.26□□□□□ -0.45
NUP50-219ENST00000497960 TAF9BQ9HBM6 251 aa12.26□□□□□ -0.45
NUP50-219ENST00000497960 MBNL3Q9NUK0 354 aaKnown RBP12.26□□□□□ -0.45
NUP50-219ENST00000497960 EXTL2Q9UBQ6 330 aa12.26□□□□□ -0.45
NUP50-219ENST00000497960 ELF5Q9UKW6 265 aaPredicted RBP12.26□□□□□ -0.45
NUP50-219ENST00000497960 MGAT4AQ9UM21 535 aa12.26□□□□□ -0.45
NUP50-219ENST00000497960 TRBV6-6A0A0A6YYG2 114 aa12.25□□□□□ -0.45
NUP50-219ENST00000497960 HBZP02008 142 aa12.25□□□□□ -0.45
NUP50-219ENST00000497960 PITPNAQ00169 270 aa12.25□□□□□ -0.45
NUP50-219ENST00000497960 TMEM30BQ3MIR4 351 aa12.25□□□□□ -0.45
NUP50-219ENST00000497960 ZNF880Q6PDB4 577 aa12.25□□□□□ -0.45
NUP50-219ENST00000497960 Q6ZS46 218 aa12.25□□□□□ -0.45
NUP50-219ENST00000497960 ZNF554Q86TJ5 538 aa12.25□□□□□ -0.45
NUP50-219ENST00000497960 THNSL2Q86YJ6 484 aa12.25□□□□□ -0.45
NUP50-219ENST00000497960 OR8H3Q8N146 312 aa12.25□□□□□ -0.45
NUP50-219ENST00000497960 MIXL1Q9H2W2 232 aa12.25□□□□□ -0.45
NUP50-219ENST00000497960 AUNIPQ9H7T9 357 aa12.25□□□□□ -0.45
NUP50-219ENST00000497960 GFOD1Q9NXC2 390 aa12.25□□□□□ -0.45
NUP50-219ENST00000497960 IGHV3-43A0A0B4J1X8 118 aa12.24□□□□□ -0.45
NUP50-219ENST00000497960 A0A1W2PPE3 182 aa12.24□□□□□ -0.45
NUP50-219ENST00000497960 CTDSP2O14595 271 aa12.24□□□□□ -0.45
NUP50-219ENST00000497960 IGHV3-43DP0DP04 118 aa12.24□□□□□ -0.45
NUP50-219ENST00000497960 DTYMKP23919 212 aa12.24□□□□□ -0.45
NUP50-219ENST00000497960 IL3RAP26951 378 aa12.24□□□□□ -0.45
NUP50-219ENST00000497960 HES1Q14469 280 aa12.24□□□□□ -0.45
NUP50-219ENST00000497960 HMGN3Q15651 99 aa12.24□□□□□ -0.45
NUP50-219ENST00000497960 TMEM95Q3KNT9 176 aa12.24□□□□□ -0.45
NUP50-219ENST00000497960 ABCA11PQ4W5N1 156 aa12.24□□□□□ -0.45
NUP50-219ENST00000497960 Q6ZPA2 131 aa12.24□□□□□ -0.45
NUP50-219ENST00000497960 DRAM1Q8N682 238 aa12.24□□□□□ -0.45
NUP50-219ENST00000497960 C8orf31Q8N9H6 132 aa12.24□□□□□ -0.45
NUP50-219ENST00000497960 OR56B4Q8NH76 319 aa12.24□□□□□ -0.45
NUP50-219ENST00000497960 OR1L1Q8NH94 360 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms