RNA–Protein interactions for RNA: ENST00000497849.1

VIM-208, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-208ENST00000497849 GHITMQ9H3K2 345 aa12.68□□□□□ -0.38
VIM-208ENST00000497849 TPSG1Q9NRR2 321 aa12.68□□□□□ -0.38
VIM-208ENST00000497849 TAS2R4Q9NYW5 299 aa12.68□□□□□ -0.38
VIM-208ENST00000497849 G3V318 75 aa12.67□□□□□ -0.38
VIM-208ENST00000497849 KDM4BO94953 1096 aa12.67□□□□□ -0.38
VIM-208ENST00000497849 CD1AP06126 327 aa12.67□□□□□ -0.38
VIM-208ENST00000497849 ATF1P18846 271 aa12.67□□□□□ -0.38
VIM-208ENST00000497849 TMBIM6P55061 237 aa12.67□□□□□ -0.38
VIM-208ENST00000497849 ACSM3Q53FZ2 586 aa12.67□□□□□ -0.38
VIM-208ENST00000497849 YIF1BQ5BJH7 314 aa12.67□□□□□ -0.38
VIM-208ENST00000497849 CHST4Q8NCG5 386 aa12.67□□□□□ -0.38
VIM-208ENST00000497849 OR51T1Q8NGJ9 327 aa12.67□□□□□ -0.38
VIM-208ENST00000497849 OR13C9Q8NGT0 318 aa12.67□□□□□ -0.38
VIM-208ENST00000497849 RFT1Q96AA3 541 aa12.67□□□□□ -0.38
VIM-208ENST00000497849 NDUFB11Q9NX14 153 aa12.67□□□□□ -0.38
VIM-208ENST00000497849 RSL24D1Q9UHA3 163 aaKnown RBP12.67□□□□□ -0.38
VIM-208ENST00000497849 KIF25Q9UIL4 384 aa12.67□□□□□ -0.38
VIM-208ENST00000497849 WSB1Q9Y6I7 421 aa12.67□□□□□ -0.38
VIM-208ENST00000497849 MEIKINA0A087WXM9 373 aa12.66□□□□□ -0.38
VIM-208ENST00000497849 LINC01619G3V211 115 aa12.66□□□□□ -0.38
VIM-208ENST00000497849 ZNF701M0R085 212 aaPredicted RBP12.66□□□□□ -0.38
VIM-208ENST00000497849 HSPA12AO43301 675 aa12.66□□□□□ -0.38
VIM-208ENST00000497849 MOSP00540 346 aa12.66□□□□□ -0.38
VIM-208ENST00000497849 OR8U9P0C7N5 309 aa12.66□□□□□ -0.38
VIM-208ENST00000497849 CD1BP29016 333 aa12.66□□□□□ -0.38
VIM-208ENST00000497849 RAB9AP51151 201 aa12.66□□□□□ -0.38
VIM-208ENST00000497849 TIMM50Q3ZCQ8 353 aa12.66□□□□□ -0.38
VIM-208ENST00000497849 Q499Y3 187 aa12.66□□□□□ -0.38
VIM-208ENST00000497849 TMEM91Q6ZNR0 172 aa12.66□□□□□ -0.38
VIM-208ENST00000497849 SLC16A12Q6ZSM3 486 aa12.66□□□□□ -0.38
VIM-208ENST00000497849 CEACAM19Q7Z692 300 aa12.66□□□□□ -0.38
VIM-208ENST00000497849 OR51A2Q8NGJ7 313 aa12.66□□□□□ -0.38
VIM-208ENST00000497849 RAB2BQ8WUD1 216 aa12.66□□□□□ -0.38
VIM-208ENST00000497849 SPACA5Q96QH8 159 aa12.66□□□□□ -0.38
VIM-208ENST00000497849 CHCHD6Q9BRQ6 235 aa12.66□□□□□ -0.38
VIM-208ENST00000497849 NAA50Q9GZZ1 169 aaKnown RBP12.66□□□□□ -0.38
VIM-208ENST00000497849 ZCCHC4Q9H5U6 513 aa12.66□□□□□ -0.38
VIM-208ENST00000497849 RETNQ9HD89 108 aa12.66□□□□□ -0.38
VIM-208ENST00000497849 TRAV8-7A0A075B6U6 113 aa12.65□□□□□ -0.38
VIM-208ENST00000497849 IGHV4OR15-8A0A075B7B6 117 aa12.65□□□□□ -0.38
VIM-208ENST00000497849 A0A087WW49 117 aa12.65□□□□□ -0.38
VIM-208ENST00000497849 TRBV5-7A0A0A0MS05 114 aa12.65□□□□□ -0.38
VIM-208ENST00000497849 FAM90A10PA6NDY2 464 aa12.65□□□□□ -0.38
VIM-208ENST00000497849 DEGS1O15121 323 aa12.65□□□□□ -0.38
VIM-208ENST00000497849 GADD45AP24522 165 aa12.65□□□□□ -0.38
VIM-208ENST00000497849 PSMA1P25786 263 aaKnown RBP12.65□□□□□ -0.38
VIM-208ENST00000497849 SSTR5P35346 364 aa12.65□□□□□ -0.38
VIM-208ENST00000497849 FABP5Q01469 135 aa12.65□□□□□ -0.38
VIM-208ENST00000497849 PARP16Q8N5Y8 322 aa12.65□□□□□ -0.38
VIM-208ENST00000497849 OR8H1Q8NGG4 311 aa12.65□□□□□ -0.38
VIM-208ENST00000497849 MRGPRDQ8TDS7 321 aa12.65□□□□□ -0.38
VIM-208ENST00000497849 PP6455Q8WZ26 134 aa12.65□□□□□ -0.38
VIM-208ENST00000497849 TMEM106AQ96A25 262 aa12.65□□□□□ -0.38
VIM-208ENST00000497849 C10orf35Q96D05 121 aa12.65□□□□□ -0.38
VIM-208ENST00000497849 DERL3Q96Q80 235 aa12.65□□□□□ -0.38
VIM-208ENST00000497849 OR4C12Q96R67 309 aa12.65□□□□□ -0.38
VIM-208ENST00000497849 BCL7BQ9BQE9 202 aa12.65□□□□□ -0.38
VIM-208ENST00000497849 TOLLIPQ9H0E2 274 aa12.65□□□□□ -0.38
VIM-208ENST00000497849 NCOR1P1Q9H4R4 102 aa12.65□□□□□ -0.38
VIM-208ENST00000497849 ZNF107Q9UII5 783 aaPredicted RBP12.65□□□□□ -0.38
VIM-208ENST00000497849 HECTD4Q9Y4D8 3996 aa12.64□□□□□ -0.39
VIM-208ENST00000497849 HSPB6O14558 160 aa12.64□□□□□ -0.39
VIM-208ENST00000497849 AIREO43918 545 aa12.64□□□□□ -0.39
VIM-208ENST00000497849 GABARAPO95166 117 aa12.64□□□□□ -0.39
VIM-208ENST00000497849 IGLV1-51P01701 117 aa12.64□□□□□ -0.39
VIM-208ENST00000497849 SLC2A2P11168 524 aaPredicted RBP12.64□□□□□ -0.39
VIM-208ENST00000497849 ARSBP15848 533 aa12.64□□□□□ -0.39
VIM-208ENST00000497849 CNTFRP26992 372 aa12.64□□□□□ -0.39
VIM-208ENST00000497849 UTS2BQ765I0 119 aa12.64□□□□□ -0.39
VIM-208ENST00000497849 SERPINA12Q8IW75 414 aa12.64□□□□□ -0.39
VIM-208ENST00000497849 MS4A15Q8N5U1 240 aa12.64□□□□□ -0.39
VIM-208ENST00000497849 OR10A7Q8NGE5 316 aa12.64□□□□□ -0.39
VIM-208ENST00000497849 OR5D18Q8NGL1 313 aa12.64□□□□□ -0.39
VIM-208ENST00000497849 OR5D14Q8NGL3 314 aa12.64□□□□□ -0.39
VIM-208ENST00000497849 RTN4IP1Q8WWV3 396 aaPredicted RBP12.64□□□□□ -0.39
VIM-208ENST00000497849 OR51E2Q9H255 320 aa12.64□□□□□ -0.39
VIM-208ENST00000497849 STUB1Q9UNE7 303 aa12.64□□□□□ -0.39
VIM-208ENST00000497849 TRAV39A0A0B4J263 110 aa12.63□□□□□ -0.39
VIM-208ENST00000497849 GABRPO00591 440 aa12.63□□□□□ -0.39
VIM-208ENST00000497849 ATP6V0E1O15342 81 aa12.63□□□□□ -0.39
VIM-208ENST00000497849 CD2P06729 351 aa12.63□□□□□ -0.39
VIM-208ENST00000497849 PRKACBP22694 351 aa12.63□□□□□ -0.39
VIM-208ENST00000497849 PITPNAQ00169 270 aa12.63□□□□□ -0.39
VIM-208ENST00000497849 TRAM1Q15629 374 aa12.63□□□□□ -0.39
VIM-208ENST00000497849 RSBN1Q5VWQ0 802 aaPredicted RBP12.63□□□□□ -0.39
VIM-208ENST00000497849 DDB2Q92466 427 aa12.63□□□□□ -0.39
VIM-208ENST00000497849 FAM110AQ9BQ89 295 aa12.63□□□□□ -0.39
VIM-208ENST00000497849 SSR3Q9UNL2 185 aa12.63□□□□□ -0.39
VIM-208ENST00000497849 TRAV24A0A0B4J272 114 aa12.62□□□□□ -0.39
VIM-208ENST00000497849 LOC100506127A0A0U1RQW1 187 aa12.62□□□□□ -0.39
VIM-208ENST00000497849 H3BMQ9 156 aa12.62□□□□□ -0.39
VIM-208ENST00000497849 GPX5O75715 221 aa12.62□□□□□ -0.39
VIM-208ENST00000497849 SC5DO75845 299 aa12.62□□□□□ -0.39
VIM-208ENST00000497849 MAS1P04201 325 aa12.62□□□□□ -0.39
VIM-208ENST00000497849 OCMP0CE72 109 aaPredicted RBP12.62□□□□□ -0.39
VIM-208ENST00000497849 IGFBP3P17936 291 aaPredicted RBP12.62□□□□□ -0.39
VIM-208ENST00000497849 LSM3P62310 102 aaKnown RBP12.62□□□□□ -0.39
VIM-208ENST00000497849 CTF1Q16619 201 aa12.62□□□□□ -0.39
VIM-208ENST00000497849 ZNF529Q6P280 563 aa12.62□□□□□ -0.39
VIM-208ENST00000497849 LINC00311Q8N616 119 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms