RNA–Protein interactions for RNA: ENST00000497311.5

SMC4-226, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-226ENST00000497311 JPT1Q9UK76 154 aa13.42□□□□□ -0.26
SMC4-226ENST00000497311 YPEL1O60688 119 aa13.41□□□□□ -0.26
SMC4-226ENST00000497311 PSMB8P28062 276 aa13.41□□□□□ -0.26
SMC4-226ENST00000497311 PPP1CCP36873 323 aaKnown RBP13.41□□□□□ -0.26
SMC4-226ENST00000497311 HTD2P86397 168 aa13.41□□□□□ -0.26
SMC4-226ENST00000497311 GNMTQ14749 295 aa13.41□□□□□ -0.26
SMC4-226ENST00000497311 NKAPLQ5M9Q1 402 aa13.41□□□□□ -0.26
SMC4-226ENST00000497311 C9orf66Q5T8R8 295 aa13.41□□□□□ -0.26
SMC4-226ENST00000497311 C4orf3Q8WVX3 66 aa13.41□□□□□ -0.26
SMC4-226ENST00000497311 GALMQ96C23 342 aa13.41□□□□□ -0.26
SMC4-226ENST00000497311 CYYR1Q96J86 154 aa13.41□□□□□ -0.26
SMC4-226ENST00000497311 NEDD4LQ96PU5 975 aa13.41□□□□□ -0.26
SMC4-226ENST00000497311 YPEL2Q96QA6 119 aa13.41□□□□□ -0.26
SMC4-226ENST00000497311 TPRKBQ9Y3C4 175 aa13.41□□□□□ -0.26
SMC4-226ENST00000497311 LRRC42Q9Y546 428 aa13.41□□□□□ -0.26
SMC4-226ENST00000497311 RGS11O94810 467 aa13.4□□□□□ -0.26
SMC4-226ENST00000497311 UBBP0CG47 229 aa13.4□□□□□ -0.26
SMC4-226ENST00000497311 LUMP51884 338 aaPredicted RBP13.4□□□□□ -0.26
SMC4-226ENST00000497311 ACTBP60709 375 aa13.4□□□□□ -0.26
SMC4-226ENST00000497311 C5orf24Q7Z6I8 188 aa13.4□□□□□ -0.26
SMC4-226ENST00000497311 ODF3L1Q8IXM7 274 aa13.4□□□□□ -0.26
SMC4-226ENST00000497311 ZNF251Q9BRH9 671 aa13.4□□□□□ -0.26
SMC4-226ENST00000497311 MND1Q9BWT6 205 aa13.4□□□□□ -0.26
SMC4-226ENST00000497311 MRPL20Q9BYC9 149 aaKnown RBP13.4□□□□□ -0.26
SMC4-226ENST00000497311 ACSM3Q53FZ2 586 aa13.39□□□□□ -0.27
SMC4-226ENST00000497311 LY6G6FQ5SQ64 297 aa13.39□□□□□ -0.27
SMC4-226ENST00000497311 GLT8D1Q68CQ7 371 aa13.39□□□□□ -0.27
SMC4-226ENST00000497311 TMEM65Q6PI78 240 aa13.39□□□□□ -0.27
SMC4-226ENST00000497311 MS4A15Q8N5U1 240 aa13.39□□□□□ -0.27
SMC4-226ENST00000497311 OR11H1Q8NG94 326 aa13.39□□□□□ -0.27
SMC4-226ENST00000497311 NABP2Q9BQ15 211 aa13.39□□□□□ -0.27
SMC4-226ENST00000497311 DUSP21Q9H596 190 aa13.39□□□□□ -0.27
SMC4-226ENST00000497311 WSB1Q9Y6I7 421 aa13.39□□□□□ -0.27
SMC4-226ENST00000497311 SEC14L6B5MCN3 397 aa13.38□□□□□ -0.27
SMC4-226ENST00000497311 NBR2O15453 112 aa13.38□□□□□ -0.27
SMC4-226ENST00000497311 HLA-DRB1P01911 266 aa13.38□□□□□ -0.27
SMC4-226ENST00000497311 CNTFRP26992 372 aa13.38□□□□□ -0.27
SMC4-226ENST00000497311 CHATP28329 748 aa13.38□□□□□ -0.27
SMC4-226ENST00000497311 PPIFP30405 207 aaKnown RBP13.38□□□□□ -0.27
SMC4-226ENST00000497311 INSL4Q14641 139 aa13.38□□□□□ -0.27
SMC4-226ENST00000497311 IRF3Q14653 427 aa13.38□□□□□ -0.27
SMC4-226ENST00000497311 OR10K2Q6IF99 312 aa13.38□□□□□ -0.27
SMC4-226ENST00000497311 ZNF833PQ6ZTB9 187 aa13.38□□□□□ -0.27
SMC4-226ENST00000497311 OR2AK2Q8NG84 335 aa13.38□□□□□ -0.27
SMC4-226ENST00000497311 RITA1Q96K30 269 aa13.38□□□□□ -0.27
SMC4-226ENST00000497311 WWC2-AS2Q96NR7 200 aa13.38□□□□□ -0.27
SMC4-226ENST00000497311 SULT4A1Q9BR01 284 aa13.38□□□□□ -0.27
SMC4-226ENST00000497311 FAAP24Q9BTP7 215 aa13.38□□□□□ -0.27
SMC4-226ENST00000497311 OR51J1Q9H342 316 aa13.38□□□□□ -0.27
SMC4-226ENST00000497311 ABRACLQ9P1F3 81 aa13.38□□□□□ -0.27
SMC4-226ENST00000497311 RAB26Q9ULW5 256 aa13.38□□□□□ -0.27
SMC4-226ENST00000497311 LSM2Q9Y333 95 aaKnown RBP13.38□□□□□ -0.27
SMC4-226ENST00000497311 KMT2CQ8NEZ4 4911 aaKnown RBP13.38□□□□□ -0.27
SMC4-226ENST00000497311 SAA2-SAA4A0A096LPE2 208 aa13.37□□□□□ -0.27
SMC4-226ENST00000497311 ATP6V0E1O15342 81 aa13.37□□□□□ -0.27
SMC4-226ENST00000497311 SAA2P0DJI9 122 aaPredicted RBP13.37□□□□□ -0.27
SMC4-226ENST00000497311 VSIG8P0DPA2 414 aa13.37□□□□□ -0.27
SMC4-226ENST00000497311 CRHBPP24387 322 aa13.37□□□□□ -0.27
SMC4-226ENST00000497311 ECI1P42126 302 aa13.37□□□□□ -0.27
SMC4-226ENST00000497311 OR3A3P47888 321 aa13.37□□□□□ -0.27
SMC4-226ENST00000497311 RPS27AP62979 156 aaKnown RBP13.37□□□□□ -0.27
SMC4-226ENST00000497311 FHL3Q13643 280 aa13.37□□□□□ -0.27
SMC4-226ENST00000497311 SPHARQ15513 63 aa13.37□□□□□ -0.27
SMC4-226ENST00000497311 HMGN3Q15651 99 aa13.37□□□□□ -0.27
SMC4-226ENST00000497311 C5orf64Q2M2E5 130 aa13.37□□□□□ -0.27
SMC4-226ENST00000497311 RBM48Q5RL73 367 aaKnown RBP13.37□□□□□ -0.27
SMC4-226ENST00000497311 C1orf100Q5SVJ3 147 aa13.37□□□□□ -0.27
SMC4-226ENST00000497311 FAM27D1Q5T7N8 215 aa13.37□□□□□ -0.27
SMC4-226ENST00000497311 C6orf201Q7Z4U5 140 aa13.37□□□□□ -0.27
SMC4-226ENST00000497311 KCNG3Q8TAE7 436 aa13.37□□□□□ -0.27
SMC4-226ENST00000497311 MYOZ3Q8TDC0 251 aa13.37□□□□□ -0.27
SMC4-226ENST00000497311 IL1F10Q8WWZ1 152 aa13.37□□□□□ -0.27
SMC4-226ENST00000497311 UBE2E2Q96LR5 201 aa13.37□□□□□ -0.27
SMC4-226ENST00000497311 CNBD2Q96M20 576 aa13.37□□□□□ -0.27
SMC4-226ENST00000497311 TMED9Q9BVK6 235 aa13.37□□□□□ -0.27
SMC4-226ENST00000497311 TMEM59Q9BXS4 323 aa13.37□□□□□ -0.27
SMC4-226ENST00000497311 KLK15Q9H2R5 256 aa13.37□□□□□ -0.27
SMC4-226ENST00000497311 PARP11Q9NR21 331 aa13.37□□□□□ -0.27
SMC4-226ENST00000497311 KIAA1456Q9P272 454 aa13.37□□□□□ -0.27
SMC4-226ENST00000497311 STEAP1Q9UHE8 339 aa13.37□□□□□ -0.27
SMC4-226ENST00000497311 NBEAL2Q6ZNJ1 2754 aa13.36□□□□□ -0.27
SMC4-226ENST00000497311 IGHV7-81A0A0B4J1V7 117 aa13.36□□□□□ -0.27
SMC4-226ENST00000497311 G3V318 75 aa13.36□□□□□ -0.27
SMC4-226ENST00000497311 RGS10O43665 173 aa13.36□□□□□ -0.27
SMC4-226ENST00000497311 NHLRC4P0CG21 123 aaPredicted RBP13.36□□□□□ -0.27
SMC4-226ENST00000497311 ZNF260Q3ZCT1 412 aa13.36□□□□□ -0.27
SMC4-226ENST00000497311 LIN54Q6MZP7 749 aa13.36□□□□□ -0.27
SMC4-226ENST00000497311 LRRTM1Q86UE6 522 aa13.36□□□□□ -0.27
SMC4-226ENST00000497311 ZNF491Q8N8L2 437 aa13.36□□□□□ -0.27
SMC4-226ENST00000497311 NPBQ8NG41 125 aa13.36□□□□□ -0.27
SMC4-226ENST00000497311 PHYHIPQ92561 330 aa13.36□□□□□ -0.27
SMC4-226ENST00000497311 PRR25Q96S07 402 aa13.36□□□□□ -0.27
SMC4-226ENST00000497311 CHMP1AQ9HD42 196 aaPredicted RBP13.36□□□□□ -0.27
SMC4-226ENST00000497311 PIPOXQ9P0Z9 390 aa13.36□□□□□ -0.27
SMC4-226ENST00000497311 SCOCQ9UIL1 159 aa13.36□□□□□ -0.27
SMC4-226ENST00000497311 VSIG4Q9Y279 399 aa13.36□□□□□ -0.27
SMC4-226ENST00000497311 LSM4Q9Y4Z0 139 aaKnown RBP13.36□□□□□ -0.27
SMC4-226ENST00000497311 TENM3Q9P273 2699 aa13.35□□□□□ -0.27
SMC4-226ENST00000497311 TRAV41A0A0B4J266 112 aa13.35□□□□□ -0.27
SMC4-226ENST00000497311 IGLV1-40P01703 118 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms