RNA–Protein interactions for RNA: ENST00000496910.1

EXOSC3-208, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 217 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-208ENST00000496910 SLC25A15Q9Y619 301 aa2.73□□□□□ -1.97
EXOSC3-208ENST00000496910 ZNF106Q9H2Y7 1883 aaKnown RBP2.73□□□□□ -1.97
EXOSC3-208ENST00000496910 ASTN1O14525 1302 aa2.72□□□□□ -1.97
EXOSC3-208ENST00000496910 FLG2Q5D862 2391 aaPredicted RBP2.72□□□□□ -1.97
EXOSC3-208ENST00000496910 SMIM26A0A096LP01 95 aa2.72□□□□□ -1.97
EXOSC3-208ENST00000496910 IGHV7-81A0A0B4J1V7 117 aa2.72□□□□□ -1.97
EXOSC3-208ENST00000496910 IGKV1-8A0A0C4DH67 115 aa2.72□□□□□ -1.97
EXOSC3-208ENST00000496910 A0A0J9YXV3 536 aa2.72□□□□□ -1.97
EXOSC3-208ENST00000496910 ZNF878C9JN71 531 aa2.72□□□□□ -1.97
EXOSC3-208ENST00000496910 C8orf87E5RJ46 101 aa2.72□□□□□ -1.97
EXOSC3-208ENST00000496910 C15orf65H3BRN8 121 aa2.72□□□□□ -1.97
EXOSC3-208ENST00000496910 STX10O60499 249 aa2.72□□□□□ -1.97
EXOSC3-208ENST00000496910 ZNF253O75346 499 aa2.72□□□□□ -1.97
EXOSC3-208ENST00000496910 HAND1O96004 215 aa2.72□□□□□ -1.97
EXOSC3-208ENST00000496910 REG1AP05451 166 aa2.72□□□□□ -1.97
EXOSC3-208ENST00000496910 GABRA1P14867 456 aa2.72□□□□□ -1.97
EXOSC3-208ENST00000496910 TAC1P20366 129 aa2.72□□□□□ -1.97
EXOSC3-208ENST00000496910 CXCR1P25024 350 aa2.72□□□□□ -1.97
EXOSC3-208ENST00000496910 CCR7P32248 378 aa2.72□□□□□ -1.97
EXOSC3-208ENST00000496910 DRD3P35462 400 aa2.72□□□□□ -1.97
EXOSC3-208ENST00000496910 CTRLP40313 264 aa2.72□□□□□ -1.97
EXOSC3-208ENST00000496910 LGALS7P47929 136 aa2.72□□□□□ -1.97
EXOSC3-208ENST00000496910 TAS2R43P59537 309 aa2.72□□□□□ -1.97
EXOSC3-208ENST00000496910 FKBP1AP62942 108 aaKnown RBP2.72□□□□□ -1.97
EXOSC3-208ENST00000496910 RGNQ15493 299 aa2.72□□□□□ -1.97
EXOSC3-208ENST00000496910 PRR4Q16378 134 aa2.72□□□□□ -1.97
EXOSC3-208ENST00000496910 CLEC12BQ2HXU8 276 aa2.72□□□□□ -1.97
EXOSC3-208ENST00000496910 MRGPRG-AS1Q2M3A8 158 aa2.72□□□□□ -1.97
EXOSC3-208ENST00000496910 CLEC12AQ5QGZ9 265 aa2.72□□□□□ -1.97
EXOSC3-208ENST00000496910 TMEM236Q5W0B7 351 aa2.72□□□□□ -1.97
EXOSC3-208ENST00000496910 TMEM215Q68D42 235 aa2.72□□□□□ -1.97
EXOSC3-208ENST00000496910 LAMTOR1Q6IAA8 161 aa2.72□□□□□ -1.97
EXOSC3-208ENST00000496910 IGFL2Q6UWQ7 119 aa2.72□□□□□ -1.97
EXOSC3-208ENST00000496910 Q6ZS52 159 aa2.72□□□□□ -1.97
EXOSC3-208ENST00000496910 RASSF6Q6ZTQ3 369 aa2.72□□□□□ -1.97
EXOSC3-208ENST00000496910 TMEM61Q8N0U2 210 aa2.72□□□□□ -1.97
EXOSC3-208ENST00000496910 ARIH2OSQ8N7S6 290 aa2.72□□□□□ -1.97
EXOSC3-208ENST00000496910 Q8NBF4 154 aa2.72□□□□□ -1.97
EXOSC3-208ENST00000496910 TMEM161BQ8NDZ6 487 aa2.72□□□□□ -1.97
EXOSC3-208ENST00000496910 SPPL2BQ8TCT7 592 aa2.72□□□□□ -1.97
EXOSC3-208ENST00000496910 Q8WTZ3 238 aa2.72□□□□□ -1.97
EXOSC3-208ENST00000496910 FAM151AQ8WW52 585 aa2.72□□□□□ -1.97
EXOSC3-208ENST00000496910 ITLN1Q8WWA0 313 aa2.72□□□□□ -1.97
EXOSC3-208ENST00000496910 RASSF5Q8WWW0 418 aa2.72□□□□□ -1.97
EXOSC3-208ENST00000496910 RPUSD4Q96CM3 377 aaKnown RBP2.72□□□□□ -1.97
EXOSC3-208ENST00000496910 SMIM12Q96EX1 92 aa2.72□□□□□ -1.97
EXOSC3-208ENST00000496910 RILPQ96NA2 401 aa2.72□□□□□ -1.97
EXOSC3-208ENST00000496910 OR2V2Q96R30 315 aa2.72□□□□□ -1.97
EXOSC3-208ENST00000496910 METTL26Q96S19 204 aa2.72□□□□□ -1.97
EXOSC3-208ENST00000496910 PITX2Q99697 317 aa2.72□□□□□ -1.97
EXOSC3-208ENST00000496910 MED18Q9BUE0 208 aa2.72□□□□□ -1.97
EXOSC3-208ENST00000496910 EMC6Q9BV81 110 aa2.72□□□□□ -1.97
EXOSC3-208ENST00000496910 DDA1Q9BW61 102 aa2.72□□□□□ -1.97
EXOSC3-208ENST00000496910 JPT2Q9H910 190 aa2.72□□□□□ -1.97
EXOSC3-208ENST00000496910 GNB4Q9HAV0 340 aa2.72□□□□□ -1.97
EXOSC3-208ENST00000496910 EDA2RQ9HAV5 297 aa2.72□□□□□ -1.97
EXOSC3-208ENST00000496910 CCL28Q9NRJ3 127 aa2.72□□□□□ -1.97
EXOSC3-208ENST00000496910 AIG1Q9NVV5 245 aa2.72□□□□□ -1.97
EXOSC3-208ENST00000496910 DPM3Q9P2X0 92 aa2.72□□□□□ -1.97
EXOSC3-208ENST00000496910 C14orf166Q9Y224 244 aaKnown RBP2.72□□□□□ -1.97
EXOSC3-208ENST00000496910 SIGLEC7Q9Y286 467 aa2.72□□□□□ -1.97
EXOSC3-208ENST00000496910 NDUFAF1Q9Y375 327 aa2.72□□□□□ -1.97
EXOSC3-208ENST00000496910 F11RQ9Y624 299 aaKnown RBP2.72□□□□□ -1.97
EXOSC3-208ENST00000496910 A0A087WUJ7 227 aa2.71□□□□□ -1.98
EXOSC3-208ENST00000496910 TRAV8-6A0A0B4J262 113 aa2.71□□□□□ -1.98
EXOSC3-208ENST00000496910 A0A1B0GV72 72 aa2.71□□□□□ -1.98
EXOSC3-208ENST00000496910 CHP2O43745 196 aa2.71□□□□□ -1.98
EXOSC3-208ENST00000496910 NDUFS5O43920 106 aa2.71□□□□□ -1.98
EXOSC3-208ENST00000496910 REM1O75628 298 aa2.71□□□□□ -1.98
EXOSC3-208ENST00000496910 DHRS3O75911 302 aa2.71□□□□□ -1.98
EXOSC3-208ENST00000496910 DUSP14O95147 198 aaKnown RBP2.71□□□□□ -1.98
EXOSC3-208ENST00000496910 SNAPINO95295 136 aa2.71□□□□□ -1.98
EXOSC3-208ENST00000496910 EPPINO95925 133 aa2.71□□□□□ -1.98
EXOSC3-208ENST00000496910 MOSP00540 346 aa2.71□□□□□ -1.98
EXOSC3-208ENST00000496910 TRBV12-3P01733 135 aa2.71□□□□□ -1.98
EXOSC3-208ENST00000496910 GUSBP08236 651 aa2.71□□□□□ -1.98
EXOSC3-208ENST00000496910 MRPL3P09001 348 aaKnown RBP2.71□□□□□ -1.98
EXOSC3-208ENST00000496910 NBEAP1P0C6P0 100 aa2.71□□□□□ -1.98
EXOSC3-208ENST00000496910 IGHV3-43DP0DP04 118 aa2.71□□□□□ -1.98
EXOSC3-208ENST00000496910 ESDP10768 282 aa2.71□□□□□ -1.98
EXOSC3-208ENST00000496910 CD36P16671 472 aa2.71□□□□□ -1.98
EXOSC3-208ENST00000496910 ZNF708P17019 499 aa2.71□□□□□ -1.98
EXOSC3-208ENST00000496910 CXCL3P19876 107 aa2.71□□□□□ -1.98
EXOSC3-208ENST00000496910 RAB3BP20337 219 aa2.71□□□□□ -1.98
EXOSC3-208ENST00000496910 ACOT2P49753 483 aa2.71□□□□□ -1.98
EXOSC3-208ENST00000496910 TAS2R46P59540 309 aa2.71□□□□□ -1.98
EXOSC3-208ENST00000496910 TAS2R19P59542 299 aa2.71□□□□□ -1.98
EXOSC3-208ENST00000496910 HBG1P69891 147 aa2.71□□□□□ -1.98
EXOSC3-208ENST00000496910 HBG2P69892 147 aa2.71□□□□□ -1.98
EXOSC3-208ENST00000496910 HIST3H3Q16695 136 aa2.71□□□□□ -1.98
EXOSC3-208ENST00000496910 TMEM255AQ5JRV8 349 aa2.71□□□□□ -1.98
EXOSC3-208ENST00000496910 LCE1FQ5T754 118 aa2.71□□□□□ -1.98
EXOSC3-208ENST00000496910 FBXW9Q5XUX1 488 aa2.71□□□□□ -1.98
EXOSC3-208ENST00000496910 OR10K2Q6IF99 312 aa2.71□□□□□ -1.98
EXOSC3-208ENST00000496910 ZNF544Q6NX49 715 aa2.71□□□□□ -1.98
EXOSC3-208ENST00000496910 C3orf33Q6P1S2 294 aa2.71□□□□□ -1.98
EXOSC3-208ENST00000496910 DNAJC24Q6P3W2 148 aa2.71□□□□□ -1.98
EXOSC3-208ENST00000496910 TNFAIP8L2Q6P589 184 aaPredicted RBP2.71□□□□□ -1.98
EXOSC3-208ENST00000496910 GLT6D1Q7Z4J2 308 aa2.71□□□□□ -1.98
EXOSC3-208ENST00000496910 TMEM144Q7Z5S9 345 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms