RNA–Protein interactions for RNA: ENST00000496622.1

SSBP1-213, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 2,620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-213ENST00000496622 STEAP1Q9UHE8 339 aa5.27□□□□□ -1.57
SSBP1-213ENST00000496622 RCE1Q9Y256 329 aa5.27□□□□□ -1.57
SSBP1-213ENST00000496622 LRBAP50851 2863 aa5.27□□□□□ -1.57
SSBP1-213ENST00000496622 TRAV18A0A075B6X5 111 aa5.27□□□□□ -1.57
SSBP1-213ENST00000496622 TRGV5A0A0B4J1U4 118 aa5.27□□□□□ -1.57
SSBP1-213ENST00000496622 IGHV3-64DA0A0J9YX35 117 aa5.27□□□□□ -1.57
SSBP1-213ENST00000496622 TMEM272A0A1B0GTI8 110 aa5.27□□□□□ -1.57
SSBP1-213ENST00000496622 A0A1B0GVI7 797 aa5.27□□□□□ -1.57
SSBP1-213ENST00000496622 M0R135 149 aa5.27□□□□□ -1.57
SSBP1-213ENST00000496622 OR2F2O95006 317 aa5.27□□□□□ -1.57
SSBP1-213ENST00000496622 TOMM40O96008 361 aa5.27□□□□□ -1.57
SSBP1-213ENST00000496622 MT-CO2P00403 227 aa5.27□□□□□ -1.57
SSBP1-213ENST00000496622 CHRM2P08172 466 aa5.27□□□□□ -1.57
SSBP1-213ENST00000496622 SOD3P08294 240 aa5.27□□□□□ -1.57
SSBP1-213ENST00000496622 HTR2CP28335 458 aa5.27□□□□□ -1.57
SSBP1-213ENST00000496622 DUSP1P28562 367 aa5.27□□□□□ -1.57
SSBP1-213ENST00000496622 BTCP35070 178 aa5.27□□□□□ -1.57
SSBP1-213ENST00000496622 ART1P52961 327 aa5.27□□□□□ -1.57
SSBP1-213ENST00000496622 MFAP4P55083 255 aa5.27□□□□□ -1.57
SSBP1-213ENST00000496622 ELLP55199 621 aaPredicted RBP5.27□□□□□ -1.57
SSBP1-213ENST00000496622 RAB1AP62820 205 aa5.27□□□□□ -1.57
SSBP1-213ENST00000496622 C10orf128Q5T292 105 aa5.27□□□□□ -1.57
SSBP1-213ENST00000496622 GFI1BQ5VTD9 330 aa5.27□□□□□ -1.57
SSBP1-213ENST00000496622 OLFML2AQ68BL7 652 aa5.27□□□□□ -1.57
SSBP1-213ENST00000496622 ZNF627Q7L945 461 aa5.27□□□□□ -1.57
SSBP1-213ENST00000496622 SLC22A24Q8N4F4 322 aa5.27□□□□□ -1.57
SSBP1-213ENST00000496622 TOMM5Q8N4H5 51 aa5.27□□□□□ -1.57
SSBP1-213ENST00000496622 RELL2Q8NC24 303 aaPredicted RBP5.27□□□□□ -1.57
SSBP1-213ENST00000496622 GJC3Q8NFK1 279 aa5.27□□□□□ -1.57
SSBP1-213ENST00000496622 OR4P4Q8NGL7 312 aa5.27□□□□□ -1.57
SSBP1-213ENST00000496622 HAVCR2Q8TDQ0 301 aa5.27□□□□□ -1.57
SSBP1-213ENST00000496622 ZNF799Q96GE5 643 aa5.27□□□□□ -1.57
SSBP1-213ENST00000496622 SCNM1Q9BWG6 230 aa5.27□□□□□ -1.57
SSBP1-213ENST00000496622 ATG5Q9H1Y0 275 aa5.27□□□□□ -1.57
SSBP1-213ENST00000496622 BANF2Q9H503 90 aa5.27□□□□□ -1.57
SSBP1-213ENST00000496622 FN3KRPQ9HA64 309 aa5.27□□□□□ -1.57
SSBP1-213ENST00000496622 GPR35Q9HC97 309 aa5.27□□□□□ -1.57
SSBP1-213ENST00000496622 DLL4Q9NR61 685 aa5.27□□□□□ -1.57
SSBP1-213ENST00000496622 TMEM38BQ9NVV0 291 aa5.27□□□□□ -1.57
SSBP1-213ENST00000496622 ZNF581Q9P0T4 197 aa5.27□□□□□ -1.57
SSBP1-213ENST00000496622 CKLFQ9UBR5 152 aa5.27□□□□□ -1.57
SSBP1-213ENST00000496622 HSPB7Q9UBY9 170 aa5.27□□□□□ -1.57
SSBP1-213ENST00000496622 FOXJ3Q9UPW0 622 aa5.27□□□□□ -1.57
SSBP1-213ENST00000496622 KLF13Q9Y2Y9 288 aaPredicted RBP5.27□□□□□ -1.57
SSBP1-213ENST00000496622 IGHV2-70DA0A0C4DH43 119 aa5.27□□□□□ -1.57
SSBP1-213ENST00000496622 CORTO00230 105 aa5.27□□□□□ -1.57
SSBP1-213ENST00000496622 GOSR2O14653 212 aa5.27□□□□□ -1.57
SSBP1-213ENST00000496622 PPP1R2P9O14990 202 aa5.27□□□□□ -1.57
SSBP1-213ENST00000496622 UBL3O95164 117 aa5.27□□□□□ -1.57
SSBP1-213ENST00000496622 ISG15P05161 165 aa5.27□□□□□ -1.57
SSBP1-213ENST00000496622 AKR1C4P17516 323 aa5.27□□□□□ -1.57
SSBP1-213ENST00000496622 IGFBP3P17936 291 aaPredicted RBP5.27□□□□□ -1.57
SSBP1-213ENST00000496622 OR3A4PP47883 348 aa5.27□□□□□ -1.57
SSBP1-213ENST00000496622 S100A10P60903 97 aa5.27□□□□□ -1.57
SSBP1-213ENST00000496622 KIR3DS1Q14943 382 aa5.27□□□□□ -1.57
SSBP1-213ENST00000496622 UBE2V2Q15819 145 aa5.27□□□□□ -1.57
SSBP1-213ENST00000496622 UBE2NLQ5JXB2 153 aa5.27□□□□□ -1.57
SSBP1-213ENST00000496622 FAM27BQ5VT28 67 aa5.27□□□□□ -1.57
SSBP1-213ENST00000496622 TMEM244Q5VVB8 128 aa5.27□□□□□ -1.57
SSBP1-213ENST00000496622 ZNF585AQ6P3V2 769 aa5.27□□□□□ -1.57
SSBP1-213ENST00000496622 INO80CQ6PI98 192 aaPredicted RBP5.27□□□□□ -1.57
SSBP1-213ENST00000496622 RPRMLQ8N4K4 120 aa5.27□□□□□ -1.57
SSBP1-213ENST00000496622 PAQR4Q8N4S7 273 aaPredicted RBP5.27□□□□□ -1.57
SSBP1-213ENST00000496622 OR2T35Q8NGX2 323 aa5.27□□□□□ -1.57
SSBP1-213ENST00000496622 OR10X1Q8NGY0 326 aa5.27□□□□□ -1.57
SSBP1-213ENST00000496622 PIGTQ969N2 578 aa5.27□□□□□ -1.57
SSBP1-213ENST00000496622 SLC25A28Q96A46 364 aa5.27□□□□□ -1.57
SSBP1-213ENST00000496622 S100A16Q96FQ6 103 aaKnown RBP5.27□□□□□ -1.57
SSBP1-213ENST00000496622 SELENOIQ9C0D9 397 aa5.27□□□□□ -1.57
SSBP1-213ENST00000496622 HRH4Q9H3N8 390 aa5.27□□□□□ -1.57
SSBP1-213ENST00000496622 PIGMQ9H3S5 423 aa5.27□□□□□ -1.57
SSBP1-213ENST00000496622 PLEKHA1Q9HB21 404 aa5.27□□□□□ -1.57
SSBP1-213ENST00000496622 BARX1Q9HBU1 254 aaPredicted RBP5.27□□□□□ -1.57
SSBP1-213ENST00000496622 HRASLSQ9HDD0 168 aa5.27□□□□□ -1.57
SSBP1-213ENST00000496622 TNRC6AQ8NDV7 1962 aaKnown RBP5.26□□□□□ -1.57
SSBP1-213ENST00000496622 ITPR1Q14643 2758 aa5.26□□□□□ -1.57
SSBP1-213ENST00000496622 UBR5O95071 2799 aaPredicted RBP5.26□□□□□ -1.57
SSBP1-213ENST00000496622 LOC100509620A0A075B734 347 aa5.26□□□□□ -1.57
SSBP1-213ENST00000496622 MEIKINA0A087WXM9 373 aa5.26□□□□□ -1.57
SSBP1-213ENST00000496622 TMEM235A6NFC5 223 aa5.26□□□□□ -1.57
SSBP1-213ENST00000496622 G3V3Q6 166 aa5.26□□□□□ -1.57
SSBP1-213ENST00000496622 SLC17A2O00624 439 aa5.26□□□□□ -1.57
SSBP1-213ENST00000496622 MMP23AO75900 390 aa5.26□□□□□ -1.57
SSBP1-213ENST00000496622 NDUFB8O95169 186 aa5.26□□□□□ -1.57
SSBP1-213ENST00000496622 NGFP01138 241 aa5.26□□□□□ -1.57
SSBP1-213ENST00000496622 CD79AP11912 226 aa5.26□□□□□ -1.57
SSBP1-213ENST00000496622 AREGP15514 252 aa5.26□□□□□ -1.57
SSBP1-213ENST00000496622 ZNF84P51523 738 aa5.26□□□□□ -1.57
SSBP1-213ENST00000496622 UCP3P55916 312 aa5.26□□□□□ -1.57
SSBP1-213ENST00000496622 TAS2R20P59543 309 aa5.26□□□□□ -1.57
SSBP1-213ENST00000496622 MRPS34P82930 218 aaKnown RBP5.26□□□□□ -1.57
SSBP1-213ENST00000496622 UNC119Q13432 240 aa5.26□□□□□ -1.57
SSBP1-213ENST00000496622 PDCD1Q15116 288 aa5.26□□□□□ -1.57
SSBP1-213ENST00000496622 FBLN7Q53RD9 439 aa5.26□□□□□ -1.57
SSBP1-213ENST00000496622 C22orf34Q6ZV56 151 aa5.26□□□□□ -1.57
SSBP1-213ENST00000496622 TCF24Q7RTU0 167 aa5.26□□□□□ -1.57
SSBP1-213ENST00000496622 OR14K1Q8NGZ2 314 aa5.26□□□□□ -1.57
SSBP1-213ENST00000496622 MALSU1Q96EH3 234 aa5.26□□□□□ -1.57
SSBP1-213ENST00000496622 WDYHV1Q96HA8 205 aa5.26□□□□□ -1.57
SSBP1-213ENST00000496622 IP6K3Q96PC2 410 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms