RNA–Protein interactions for RNA: ENST00000495688.5

PTPN7-217, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 2,689 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-217ENST00000495688 ZNF787Q6DD87 383 aa11.02□□□□□ -0.65
PTPN7-217ENST00000495688 ZNF525Q8N782 197 aa11.02□□□□□ -0.65
PTPN7-217ENST00000495688 GTF3AQ92664 365 aaKnown RBP11.02□□□□□ -0.65
PTPN7-217ENST00000495688 CABLES2Q9BTV7 478 aa11.02□□□□□ -0.65
PTPN7-217ENST00000495688 TRBV6-6A0A0A6YYG2 114 aa11.02□□□□□ -0.65
PTPN7-217ENST00000495688 OR2H2O95918 312 aa11.02□□□□□ -0.65
PTPN7-217ENST00000495688 CELA3BP08861 270 aa11.02□□□□□ -0.65
PTPN7-217ENST00000495688 ELLP55199 621 aaPredicted RBP11.02□□□□□ -0.65
PTPN7-217ENST00000495688 ERVS71-1P61550 626 aa11.02□□□□□ -0.65
PTPN7-217ENST00000495688 PLGLB1Q02325 96 aa11.02□□□□□ -0.65
PTPN7-217ENST00000495688 ALKBH6Q3KRA9 238 aa11.02□□□□□ -0.65
PTPN7-217ENST00000495688 SPANXN5Q5MJ07 72 aa11.02□□□□□ -0.65
PTPN7-217ENST00000495688 BEND4Q6ZU67 534 aa11.02□□□□□ -0.65
PTPN7-217ENST00000495688 ZNF610Q8N9Z0 462 aa11.02□□□□□ -0.65
PTPN7-217ENST00000495688 RCC1LQ96I51 464 aaKnown RBP11.02□□□□□ -0.65
PTPN7-217ENST00000495688 SSX3Q99909 188 aa11.02□□□□□ -0.65
PTPN7-217ENST00000495688 OR14J1Q9UGF5 321 aa11.02□□□□□ -0.65
PTPN7-217ENST00000495688 TRAPPC2LQ9UL33 140 aa11.02□□□□□ -0.65
PTPN7-217ENST00000495688 MPC1Q9Y5U8 109 aa11.02□□□□□ -0.65
PTPN7-217ENST00000495688 SMG1Q96Q15 3661 aaKnown RBP11.01□□□□□ -0.65
PTPN7-217ENST00000495688 OR5B21A6NL26 309 aa11.01□□□□□ -0.65
PTPN7-217ENST00000495688 CEBPDP49716 269 aaPredicted RBP11.01□□□□□ -0.65
PTPN7-217ENST00000495688 RAB2AP61019 212 aa11.01□□□□□ -0.65
PTPN7-217ENST00000495688 OR2B11Q5JQS5 317 aa11.01□□□□□ -0.65
PTPN7-217ENST00000495688 SLC35E3Q7Z769 313 aa11.01□□□□□ -0.65
PTPN7-217ENST00000495688 MDP1Q86V88 176 aa11.01□□□□□ -0.65
PTPN7-217ENST00000495688 SCGB1C1Q8TD33 95 aa11.01□□□□□ -0.65
PTPN7-217ENST00000495688 ZMAT5Q9UDW3 170 aaKnown RBP11.01□□□□□ -0.65
PTPN7-217ENST00000495688 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.01□□□□□ -0.65
PTPN7-217ENST00000495688 HMGB3O15347 200 aaKnown RBP11.01□□□□□ -0.65
PTPN7-217ENST00000495688 BCL2P10415 239 aa11.01□□□□□ -0.65
PTPN7-217ENST00000495688 MDKP21741 143 aaPredicted RBP11.01□□□□□ -0.65
PTPN7-217ENST00000495688 S100PP25815 95 aa11.01□□□□□ -0.65
PTPN7-217ENST00000495688 CDX1P47902 265 aaPredicted RBP11.01□□□□□ -0.65
PTPN7-217ENST00000495688 UBALD2Q8IYN6 164 aa11.01□□□□□ -0.65
PTPN7-217ENST00000495688 PRO3102Q9H379 93 aa11.01□□□□□ -0.65
PTPN7-217ENST00000495688 CDIPTO14735 213 aa11□□□□□ -0.65
PTPN7-217ENST00000495688 ACP1P24666 158 aa11□□□□□ -0.65
PTPN7-217ENST00000495688 CEACAM6P40199 344 aa11□□□□□ -0.65
PTPN7-217ENST00000495688 C4orf17Q53FE4 359 aa11□□□□□ -0.65
PTPN7-217ENST00000495688 LINC00596Q86U02 117 aa11□□□□□ -0.65
PTPN7-217ENST00000495688 MCEMP1Q8IX19 187 aa11□□□□□ -0.65
PTPN7-217ENST00000495688 LILRB2Q8N423 598 aa11□□□□□ -0.65
PTPN7-217ENST00000495688 SCCPDHQ8NBX0 429 aa11□□□□□ -0.65
PTPN7-217ENST00000495688 OR4C12Q96R67 309 aa11□□□□□ -0.65
PTPN7-217ENST00000495688 SPRY4Q9C004 299 aa11□□□□□ -0.65
PTPN7-217ENST00000495688 HIPK2Q9H2X6 1198 aa11□□□□□ -0.65
PTPN7-217ENST00000495688 RNF150Q9ULK6 438 aa11□□□□□ -0.65
PTPN7-217ENST00000495688 TRAV1-1A0A0B4J248 108 aa11□□□□□ -0.65
PTPN7-217ENST00000495688 SLC25A6P12236 298 aa11□□□□□ -0.65
PTPN7-217ENST00000495688 DCAF10Q5QP82 559 aa11□□□□□ -0.65
PTPN7-217ENST00000495688 OR8G2PQ6IF36 304 aa11□□□□□ -0.65
PTPN7-217ENST00000495688 DPPA3Q6W0C5 159 aa11□□□□□ -0.65
PTPN7-217ENST00000495688 DRAM1Q8N682 238 aa11□□□□□ -0.65
PTPN7-217ENST00000495688 CA5BP1Q8WTZ4 195 aa11□□□□□ -0.65
PTPN7-217ENST00000495688 CDX2Q99626 313 aaPredicted RBP11□□□□□ -0.65
PTPN7-217ENST00000495688 TECTAO75443 2155 aa10.99□□□□□ -0.65
PTPN7-217ENST00000495688 UBE2L5PA0A1B0GUS4 154 aa10.99□□□□□ -0.65
PTPN7-217ENST00000495688 J3QT63 122 aa10.99□□□□□ -0.65
PTPN7-217ENST00000495688 RAMP3O60896 148 aa10.99□□□□□ -0.65
PTPN7-217ENST00000495688 IGKV1D-33P01593 117 aa10.99□□□□□ -0.65
PTPN7-217ENST00000495688 IGKV1-33P01594 117 aa10.99□□□□□ -0.65
PTPN7-217ENST00000495688 CD55P08174 381 aa10.99□□□□□ -0.65
PTPN7-217ENST00000495688 SOD3P08294 240 aa10.99□□□□□ -0.65
PTPN7-217ENST00000495688 RPS16P62249 146 aaKnown RBP10.99□□□□□ -0.65
PTPN7-217ENST00000495688 ZNF497Q6ZNH5 498 aa10.99□□□□□ -0.65
PTPN7-217ENST00000495688 ABHD5Q8WTS1 349 aa10.99□□□□□ -0.65
PTPN7-217ENST00000495688 LSM10Q969L4 123 aaKnown RBP10.99□□□□□ -0.65
PTPN7-217ENST00000495688 GPR61Q9BZJ8 451 aa10.99□□□□□ -0.65
PTPN7-217ENST00000495688 OR2J1Q9GZK6 312 aa10.99□□□□□ -0.65
PTPN7-217ENST00000495688 DEFB127Q9H1M4 99 aa10.99□□□□□ -0.65
PTPN7-217ENST00000495688 CEBPZOSA8MTT3 80 aa10.99□□□□□ -0.65
PTPN7-217ENST00000495688 TFF1P04155 84 aa10.99□□□□□ -0.65
PTPN7-217ENST00000495688 MDH2P40926 338 aaKnown RBP10.99□□□□□ -0.65
PTPN7-217ENST00000495688 FGFRL1Q8N441 504 aa10.99□□□□□ -0.65
PTPN7-217ENST00000495688 FRZBQ92765 325 aa10.99□□□□□ -0.65
PTPN7-217ENST00000495688 RBKSQ9H477 322 aa10.99□□□□□ -0.65
PTPN7-217ENST00000495688 SIRT7Q9NRC8 400 aa10.99□□□□□ -0.65
PTPN7-217ENST00000495688 CISD1Q9NZ45 108 aaKnown RBP10.99□□□□□ -0.65
PTPN7-217ENST00000495688 IL17BQ9UHF5 180 aa10.99□□□□□ -0.65
PTPN7-217ENST00000495688 TINAGQ9UJW2 476 aa10.99□□□□□ -0.65
PTPN7-217ENST00000495688 MEOX1P50221 254 aa10.98□□□□□ -0.65
PTPN7-217ENST00000495688 LRRC75BQ2VPJ9 315 aa10.98□□□□□ -0.65
PTPN7-217ENST00000495688 C9orf152Q5JTZ5 239 aa10.98□□□□□ -0.65
PTPN7-217ENST00000495688 OR10D4PQ8NGN7 298 aa10.98□□□□□ -0.65
PTPN7-217ENST00000495688 WDYHV1Q96HA8 205 aa10.98□□□□□ -0.65
PTPN7-217ENST00000495688 PKIBQ9C010 78 aa10.98□□□□□ -0.65
PTPN7-217ENST00000495688 GP6Q9HCN6 339 aa10.98□□□□□ -0.65
PTPN7-217ENST00000495688 TMEM9BQ9NQ34 198 aa10.98□□□□□ -0.65
PTPN7-217ENST00000495688 GAR1Q9NY12 217 aaKnown RBP10.98□□□□□ -0.65
PTPN7-217ENST00000495688 CXorf65A6NEN9 183 aa10.98□□□□□ -0.65
PTPN7-217ENST00000495688 KRASP01116 189 aa10.98□□□□□ -0.65
PTPN7-217ENST00000495688 GRPP07492 148 aa10.98□□□□□ -0.65
PTPN7-217ENST00000495688 LINC00205P59089 165 aa10.98□□□□□ -0.65
PTPN7-217ENST00000495688 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.98□□□□□ -0.65
PTPN7-217ENST00000495688 CXorf67Q86X51 503 aaPredicted RBP10.98□□□□□ -0.65
PTPN7-217ENST00000495688 RPP25LQ8N5L8 163 aaKnown RBP10.98□□□□□ -0.65
PTPN7-217ENST00000495688 MBD3L1Q8WWY6 194 aa10.98□□□□□ -0.65
PTPN7-217ENST00000495688 BCL2L2Q92843 193 aaPredicted RBP10.98□□□□□ -0.65
PTPN7-217ENST00000495688 FAM210BQ96KR6 192 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms