RNA–Protein interactions for RNA: ENST00000495619.1

NCKAP1-208, Transcript of NCK associated protein 1, humanhuman

TSL 3

Gene NCKAP1, Length 665 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-208ENST00000495619 SCGB3A2Q96PL1 93 aa2.42□□□□□ -2.02
NCKAP1-208ENST00000495619 TBX5Q99593 518 aa2.42□□□□□ -2.02
NCKAP1-208ENST00000495619 GGACTQ9BVM4 153 aa2.42□□□□□ -2.02
NCKAP1-208ENST00000495619 SLIRPQ9GZT3 109 aaKnown RBP2.42□□□□□ -2.02
NCKAP1-208ENST00000495619 TXNIPQ9H3M7 391 aa2.42□□□□□ -2.02
NCKAP1-208ENST00000495619 NMNAT1Q9HAN9 279 aaPredicted RBP2.42□□□□□ -2.02
NCKAP1-208ENST00000495619 SPANXA1Q9NS26 97 aa2.42□□□□□ -2.02
NCKAP1-208ENST00000495619 TAS2R13Q9NYV9 303 aa2.42□□□□□ -2.02
NCKAP1-208ENST00000495619 ANGPT4Q9Y264 503 aa2.42□□□□□ -2.02
NCKAP1-208ENST00000495619 CCDC144AA2RUR9 1427 aa2.42□□□□□ -2.02
NCKAP1-208ENST00000495619 SYNMO15061 1565 aa2.41□□□□□ -2.02
NCKAP1-208ENST00000495619 DAPL1A0PJW8 107 aa2.41□□□□□ -2.02
NCKAP1-208ENST00000495619 IGSF23A1L1A6 192 aa2.41□□□□□ -2.02
NCKAP1-208ENST00000495619 C9orf170A2RU37 121 aa2.41□□□□□ -2.02
NCKAP1-208ENST00000495619 PRORSD1PA6NEY8 169 aa2.41□□□□□ -2.02
NCKAP1-208ENST00000495619 C5orf58C9J3I9 102 aa2.41□□□□□ -2.02
NCKAP1-208ENST00000495619 C15orf65H3BRN8 121 aa2.41□□□□□ -2.02
NCKAP1-208ENST00000495619 FABP7O15540 132 aa2.41□□□□□ -2.02
NCKAP1-208ENST00000495619 SYNGR1O43759 233 aa2.41□□□□□ -2.02
NCKAP1-208ENST00000495619 CCDC22O60826 627 aa2.41□□□□□ -2.02
NCKAP1-208ENST00000495619 POP7O75817 140 aaKnown RBP2.41□□□□□ -2.02
NCKAP1-208ENST00000495619 OXTP01178 125 aa2.41□□□□□ -2.02
NCKAP1-208ENST00000495619 HLA-DQB1P01920 261 aa2.41□□□□□ -2.02
NCKAP1-208ENST00000495619 BPGMP07738 259 aa2.41□□□□□ -2.02
NCKAP1-208ENST00000495619 PGA4P0DJD7 388 aa2.41□□□□□ -2.02
NCKAP1-208ENST00000495619 PGA3P0DJD8 388 aa2.41□□□□□ -2.02
NCKAP1-208ENST00000495619 PGA5P0DJD9 388 aa2.41□□□□□ -2.02
NCKAP1-208ENST00000495619 OR13C7P0DN81 318 aa2.41□□□□□ -2.02
NCKAP1-208ENST00000495619 IFI30P13284 250 aa2.41□□□□□ -2.02
NCKAP1-208ENST00000495619 TAC1P20366 129 aa2.41□□□□□ -2.02
NCKAP1-208ENST00000495619 HIST1H1TP22492 207 aaPredicted RBP2.41□□□□□ -2.02
NCKAP1-208ENST00000495619 PYCR1P32322 319 aa2.41□□□□□ -2.02
NCKAP1-208ENST00000495619 PFN2P35080 140 aa2.41□□□□□ -2.02
NCKAP1-208ENST00000495619 RPA3P35244 121 aaPredicted RBP2.41□□□□□ -2.02
NCKAP1-208ENST00000495619 AKR1D1P51857 326 aa2.41□□□□□ -2.02
NCKAP1-208ENST00000495619 DNAJB13P59910 316 aa2.41□□□□□ -2.02
NCKAP1-208ENST00000495619 ST3GAL4Q11206 333 aa2.41□□□□□ -2.02
NCKAP1-208ENST00000495619 PNOCQ13519 176 aa2.41□□□□□ -2.02
NCKAP1-208ENST00000495619 PPP1R1AQ13522 171 aa2.41□□□□□ -2.02
NCKAP1-208ENST00000495619 SURF2Q15527 256 aaPredicted RBP2.41□□□□□ -2.02
NCKAP1-208ENST00000495619 GRK1Q15835 563 aa2.41□□□□□ -2.02
NCKAP1-208ENST00000495619 HIST3H3Q16695 136 aa2.41□□□□□ -2.02
NCKAP1-208ENST00000495619 HLA-DRB5Q30154 266 aa2.41□□□□□ -2.02
NCKAP1-208ENST00000495619 FAM27D1Q5T7N8 215 aa2.41□□□□□ -2.02
NCKAP1-208ENST00000495619 KCTD16Q68DU8 428 aa2.41□□□□□ -2.02
NCKAP1-208ENST00000495619 SPNS3Q6ZMD2 512 aa2.41□□□□□ -2.02
NCKAP1-208ENST00000495619 GLT6D1Q7Z4J2 308 aa2.41□□□□□ -2.02
NCKAP1-208ENST00000495619 TMEM105Q8N8V8 129 aa2.41□□□□□ -2.02
NCKAP1-208ENST00000495619 ST6GALNAC3Q8NDV1 305 aa2.41□□□□□ -2.02
NCKAP1-208ENST00000495619 GPR32P1Q8NGA4 272 aa2.41□□□□□ -2.02
NCKAP1-208ENST00000495619 OR1P1Q8NH06 330 aa2.41□□□□□ -2.02
NCKAP1-208ENST00000495619 OR4K15Q8NH41 348 aa2.41□□□□□ -2.02
NCKAP1-208ENST00000495619 OR13C6PQ8NH95 151 aa2.41□□□□□ -2.02
NCKAP1-208ENST00000495619 DYNLL2Q96FJ2 89 aa2.41□□□□□ -2.02
NCKAP1-208ENST00000495619 SERPINI1Q99574 410 aa2.41□□□□□ -2.02
NCKAP1-208ENST00000495619 CMSS1Q9BQ75 279 aaKnown RBP2.41□□□□□ -2.02
NCKAP1-208ENST00000495619 CCDC32Q9BV29 185 aa2.41□□□□□ -2.02
NCKAP1-208ENST00000495619 MS4A6AQ9H2W1 248 aa2.41□□□□□ -2.02
NCKAP1-208ENST00000495619 ENY2Q9NPA8 101 aa2.41□□□□□ -2.02
NCKAP1-208ENST00000495619 RASL12Q9NYN1 266 aa2.41□□□□□ -2.02
NCKAP1-208ENST00000495619 OPTCQ9UBM4 332 aa2.41□□□□□ -2.02
NCKAP1-208ENST00000495619 SS18L2Q9UHA2 77 aa2.41□□□□□ -2.02
NCKAP1-208ENST00000495619 UTP11Q9Y3A2 253 aaKnown RBP2.41□□□□□ -2.02
NCKAP1-208ENST00000495619 SHANK1Q9Y566 2161 aa2.41□□□□□ -2.02
NCKAP1-208ENST00000495619 UHRF1BP1Q6BDS2 1440 aa2.41□□□□□ -2.02
NCKAP1-208ENST00000495619 COL5A1P20908 1838 aaPredicted RBP2.4□□□□□ -2.02
NCKAP1-208ENST00000495619 A0A087WUJ7 227 aa2.4□□□□□ -2.03
NCKAP1-208ENST00000495619 SMIM26A0A096LP01 95 aa2.4□□□□□ -2.03
NCKAP1-208ENST00000495619 CCDC160A6NGH7 325 aa2.4□□□□□ -2.03
NCKAP1-208ENST00000495619 OR5H1A6NKK0 313 aa2.4□□□□□ -2.03
NCKAP1-208ENST00000495619 G3V2T6 193 aa2.4□□□□□ -2.03
NCKAP1-208ENST00000495619 MANBAO00462 879 aa2.4□□□□□ -2.03
NCKAP1-208ENST00000495619 SLC17A3O00476 420 aa2.4□□□□□ -2.03
NCKAP1-208ENST00000495619 CYB5BO43169 146 aa2.4□□□□□ -2.03
NCKAP1-208ENST00000495619 BANF1O75531 89 aa2.4□□□□□ -2.03
NCKAP1-208ENST00000495619 ATG12O94817 140 aa2.4□□□□□ -2.03
NCKAP1-208ENST00000495619 PTTG1O95997 202 aa2.4□□□□□ -2.03
NCKAP1-208ENST00000495619 HTR1AP08908 422 aa2.4□□□□□ -2.03
NCKAP1-208ENST00000495619 CD37P11049 281 aa2.4□□□□□ -2.03
NCKAP1-208ENST00000495619 ZNF25P17030 456 aaPredicted RBP2.4□□□□□ -2.03
NCKAP1-208ENST00000495619 NELFEP18615 380 aaKnown RBP2.4□□□□□ -2.03
NCKAP1-208ENST00000495619 PAX6P26367 422 aa2.4□□□□□ -2.03
NCKAP1-208ENST00000495619 RPL35P42766 123 aaKnown RBP2.4□□□□□ -2.03
NCKAP1-208ENST00000495619 MAP2K4P45985 399 aa2.4□□□□□ -2.03
NCKAP1-208ENST00000495619 PSMD8P48556 350 aa2.4□□□□□ -2.03
NCKAP1-208ENST00000495619 SERPINB10P48595 397 aa2.4□□□□□ -2.03
NCKAP1-208ENST00000495619 EIF2B2P49770 351 aaKnown RBP2.4□□□□□ -2.03
NCKAP1-208ENST00000495619 RBP2P50120 134 aa2.4□□□□□ -2.03
NCKAP1-208ENST00000495619 CKS1BP61024 79 aa2.4□□□□□ -2.03
NCKAP1-208ENST00000495619 HPCAP84074 193 aa2.4□□□□□ -2.03
NCKAP1-208ENST00000495619 FUT5Q11128 374 aa2.4□□□□□ -2.03
NCKAP1-208ENST00000495619 FAM53BQ14153 422 aa2.4□□□□□ -2.03
NCKAP1-208ENST00000495619 C4orf26Q17RF5 130 aa2.4□□□□□ -2.03
NCKAP1-208ENST00000495619 ACSBG2Q5FVE4 666 aa2.4□□□□□ -2.03
NCKAP1-208ENST00000495619 RNASE10Q5GAN6 216 aaKnown RBP2.4□□□□□ -2.03
NCKAP1-208ENST00000495619 TNFAIP8L3Q5GJ75 292 aa2.4□□□□□ -2.03
NCKAP1-208ENST00000495619 HIST2H3PS2Q5TEC6 136 aa2.4□□□□□ -2.03
NCKAP1-208ENST00000495619 SMARCD3Q6STE5 483 aa2.4□□□□□ -2.03
NCKAP1-208ENST00000495619 RASSF6Q6ZTQ3 369 aa2.4□□□□□ -2.03
NCKAP1-208ENST00000495619 GALNT10Q86SR1 603 aa2.4□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms