RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 TOMM40LQ969M1 308 aa15.65■□□□□ 0.1
HDAC4-212ENST00000495497 RPEQ96AT9 228 aa15.65■□□□□ 0.1
HDAC4-212ENST00000495497 YPEL2Q96QA6 119 aa15.65■□□□□ 0.1
HDAC4-212ENST00000495497 DTYMKP23919 212 aa15.64■□□□□ 0.09
HDAC4-212ENST00000495497 CEACAM6P40199 344 aa15.64■□□□□ 0.09
HDAC4-212ENST00000495497 TAS2R20P59543 309 aa15.64■□□□□ 0.09
HDAC4-212ENST00000495497 FBLN7Q53RD9 439 aa15.64■□□□□ 0.09
HDAC4-212ENST00000495497 TMEM69Q5SWH9 247 aa15.64■□□□□ 0.09
HDAC4-212ENST00000495497 STEAP3Q658P3 488 aa15.64■□□□□ 0.09
HDAC4-212ENST00000495497 MZT2AQ6P582 158 aa15.64■□□□□ 0.09
HDAC4-212ENST00000495497 CCBE1Q6UXH8 406 aaPredicted RBP15.64■□□□□ 0.09
HDAC4-212ENST00000495497 AP3S1Q92572 193 aa15.64■□□□□ 0.09
HDAC4-212ENST00000495497 GCDHQ92947 438 aaPredicted RBP15.64■□□□□ 0.09
HDAC4-212ENST00000495497 ABHD14AQ9BUJ0 271 aa15.64■□□□□ 0.09
HDAC4-212ENST00000495497 RBM38Q9H0Z9 239 aaKnown RBP15.64■□□□□ 0.09
HDAC4-212ENST00000495497 MEIS3P1A6NDR6 274 aa15.63■□□□□ 0.09
HDAC4-212ENST00000495497 HSD17B6O14756 317 aa15.63■□□□□ 0.09
HDAC4-212ENST00000495497 BET1O15155 118 aa15.63■□□□□ 0.09
HDAC4-212ENST00000495497 ST8SIA5O15466 376 aa15.63■□□□□ 0.09
HDAC4-212ENST00000495497 HSPA12AO43301 675 aa15.63■□□□□ 0.09
HDAC4-212ENST00000495497 RGS11O94810 467 aa15.63■□□□□ 0.09
HDAC4-212ENST00000495497 APOA1P02647 267 aa15.63■□□□□ 0.09
HDAC4-212ENST00000495497 FCER2P06734 321 aa15.63■□□□□ 0.09
HDAC4-212ENST00000495497 SOX6P35712 828 aa15.63■□□□□ 0.09
HDAC4-212ENST00000495497 TMEM219Q86XT9 240 aa15.63■□□□□ 0.09
HDAC4-212ENST00000495497 LYG1Q8N1E2 194 aa15.63■□□□□ 0.09
HDAC4-212ENST00000495497 GVQW1Q8N7I0 195 aa15.63■□□□□ 0.09
HDAC4-212ENST00000495497 OR4A4PQ8NGN8 299 aa15.63■□□□□ 0.09
HDAC4-212ENST00000495497 A0A1W2PPI3 338 aa15.62■□□□□ 0.09
HDAC4-212ENST00000495497 FAM25AB3EWG3 89 aa15.62■□□□□ 0.09
HDAC4-212ENST00000495497 FAM25CB3EWG5 89 aa15.62■□□□□ 0.09
HDAC4-212ENST00000495497 FAM25GB3EWG6 89 aa15.62■□□□□ 0.09
HDAC4-212ENST00000495497 ZBTB25P24278 435 aa15.62■□□□□ 0.09
HDAC4-212ENST00000495497 MNDAP41218 407 aa15.62■□□□□ 0.09
HDAC4-212ENST00000495497 KIR2DS4P43632 304 aa15.62■□□□□ 0.09
HDAC4-212ENST00000495497 DYNLT3P51808 116 aa15.62■□□□□ 0.09
HDAC4-212ENST00000495497 PITPNAQ00169 270 aa15.62■□□□□ 0.09
HDAC4-212ENST00000495497 KIR2DS1Q14954 304 aa15.62■□□□□ 0.09
HDAC4-212ENST00000495497 OR2AK2Q8NG84 335 aa15.62■□□□□ 0.09
HDAC4-212ENST00000495497 ST6GALNAC6Q969X2 333 aa15.62■□□□□ 0.09
HDAC4-212ENST00000495497 RBMXL1Q96E39 390 aaKnown RBP15.62■□□□□ 0.09
HDAC4-212ENST00000495497 CMTM3Q96MX0 182 aa15.62■□□□□ 0.09
HDAC4-212ENST00000495497 TCF19Q9Y242 345 aa15.62■□□□□ 0.09
HDAC4-212ENST00000495497 A6NDX4 124 aa15.61■□□□□ 0.09
HDAC4-212ENST00000495497 OOSP1A8MZH6 123 aa15.61■□□□□ 0.09
HDAC4-212ENST00000495497 CTDSP2O14595 271 aa15.61■□□□□ 0.09
HDAC4-212ENST00000495497 TIMM23O14925 209 aa15.61■□□□□ 0.09
HDAC4-212ENST00000495497 CHST1O43916 411 aa15.61■□□□□ 0.09
HDAC4-212ENST00000495497 IL3RAP26951 378 aa15.61■□□□□ 0.09
HDAC4-212ENST00000495497 OR3A3P47888 321 aa15.61■□□□□ 0.09
HDAC4-212ENST00000495497 SRSF7Q16629 238 aaKnown RBP eCLIP15.61■□□□□ 0.09
HDAC4-212ENST00000495497 LY6G6FQ5SQ64 297 aa15.61■□□□□ 0.09
HDAC4-212ENST00000495497 Q6ZS49 121 aa15.61■□□□□ 0.09
HDAC4-212ENST00000495497 ODF3L1Q8IXM7 274 aa15.61■□□□□ 0.09
HDAC4-212ENST00000495497 DRAM1Q8N682 238 aa15.61■□□□□ 0.09
HDAC4-212ENST00000495497 CABLES2Q9BTV7 478 aa15.61■□□□□ 0.09
HDAC4-212ENST00000495497 C11orf54Q9H0W9 315 aaPredicted RBP15.61■□□□□ 0.09
HDAC4-212ENST00000495497 MIXL1Q9H2W2 232 aa15.61■□□□□ 0.09
HDAC4-212ENST00000495497 RDH8Q9NYR8 311 aa15.61■□□□□ 0.09
HDAC4-212ENST00000495497 C1RLQ9NZP8 487 aa15.61■□□□□ 0.09
HDAC4-212ENST00000495497 CCDC59Q9P031 241 aaKnown RBP15.61■□□□□ 0.09
HDAC4-212ENST00000495497 MRPS7Q9Y2R9 242 aaKnown RBP15.61■□□□□ 0.09
HDAC4-212ENST00000495497 TRBV6-7A0A0A0MS04 114 aa15.6■□□□□ 0.09
HDAC4-212ENST00000495497 IGHV3-72A0A0B4J1Y9 119 aa15.6■□□□□ 0.09
HDAC4-212ENST00000495497 IGHV1-3A0A0C4DH29 117 aa15.6■□□□□ 0.09
HDAC4-212ENST00000495497 HLA-DQB1P01920 261 aa15.6■□□□□ 0.09
HDAC4-212ENST00000495497 GAPDHP04406 335 aaKnown RBP15.6■□□□□ 0.09
HDAC4-212ENST00000495497 CRYBA1P05813 215 aa15.6■□□□□ 0.09
HDAC4-212ENST00000495497 HKR1P10072 659 aa15.6■□□□□ 0.09
HDAC4-212ENST00000495497 BRS3P32247 399 aa15.6■□□□□ 0.09
HDAC4-212ENST00000495497 RAB7AP51149 207 aa15.6■□□□□ 0.09
HDAC4-212ENST00000495497 RELBQ01201 579 aa15.6■□□□□ 0.09
HDAC4-212ENST00000495497 ZNF816Q0VGE8 651 aaPredicted RBP15.6■□□□□ 0.09
HDAC4-212ENST00000495497 CCDC144NLQ6NUI1 221 aa15.6■□□□□ 0.09
HDAC4-212ENST00000495497 MOB3BQ86TA1 216 aa15.6■□□□□ 0.09
HDAC4-212ENST00000495497 OR56B4Q8NH76 319 aa15.6■□□□□ 0.09
HDAC4-212ENST00000495497 CAPSLQ8WWF8 208 aa15.6■□□□□ 0.09
HDAC4-212ENST00000495497 RTN4IP1Q8WWV3 396 aaPredicted RBP15.6■□□□□ 0.09
HDAC4-212ENST00000495497 CFHR4Q92496 578 aa15.6■□□□□ 0.09
HDAC4-212ENST00000495497 ABHD14BQ96IU4 210 aa15.6■□□□□ 0.09
HDAC4-212ENST00000495497 IFI27L2Q9H2X8 130 aa15.6■□□□□ 0.09
HDAC4-212ENST00000495497 RSL24D1Q9UHA3 163 aaKnown RBP15.6■□□□□ 0.09
HDAC4-212ENST00000495497 RNF150Q9ULK6 438 aa15.6■□□□□ 0.09
HDAC4-212ENST00000495497 SMIM31A0A1B0GVY4 71 aa15.59■□□□□ 0.09
HDAC4-212ENST00000495497 TMEM89A2RUT3 159 aa15.59■□□□□ 0.09
HDAC4-212ENST00000495497 RGS5O15539 181 aa15.59■□□□□ 0.09
HDAC4-212ENST00000495497 ARHGDIBP52566 201 aa15.59■□□□□ 0.09
HDAC4-212ENST00000495497 DHRS7BQ6IAN0 325 aaPredicted RBP15.59■□□□□ 0.09
HDAC4-212ENST00000495497 OR10J5Q8NHC4 309 aa15.59■□□□□ 0.09
HDAC4-212ENST00000495497 DNHD1Q96M86 4753 aa15.58■□□□□ 0.09
HDAC4-212ENST00000495497 SAA2-SAA4A0A096LPE2 208 aa15.58■□□□□ 0.08
HDAC4-212ENST00000495497 SNRNP70P08621 437 aaKnown RBP15.58■□□□□ 0.08
HDAC4-212ENST00000495497 SAA2P0DJI9 122 aaPredicted RBP15.58■□□□□ 0.08
HDAC4-212ENST00000495497 ZNF137PP52743 207 aa15.58■□□□□ 0.08
HDAC4-212ENST00000495497 RPL39P5Q59GN2 51 aa15.58■□□□□ 0.08
HDAC4-212ENST00000495497 HOGA1Q86XE5 327 aa15.58■□□□□ 0.08
HDAC4-212ENST00000495497 TGIF2LXQ8IUE1 241 aa15.58■□□□□ 0.08
HDAC4-212ENST00000495497 SNX29P2Q8IUI4 249 aa15.58■□□□□ 0.08
HDAC4-212ENST00000495497 LAX1Q8IWV1 398 aa15.58■□□□□ 0.08
HDAC4-212ENST00000495497 OR8H3Q8N146 312 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms