RNA–Protein interactions for RNA: ENST00000494945.1

PKP4-215, Transcript of plakophilin 4, humanhuman

TSL 5

Gene PKP4, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-215ENST00000494945 RBM7Q9Y580 266 aaKnown RBP9.09□□□□□ -0.95
PKP4-215ENST00000494945 ABCA12Q86UK0 2595 aa9.08□□□□□ -0.96
PKP4-215ENST00000494945 IGHV3-43A0A0B4J1X8 118 aa9.08□□□□□ -0.96
PKP4-215ENST00000494945 C9orf170A2RU37 121 aa9.08□□□□□ -0.96
PKP4-215ENST00000494945 CRYM-AS1A6NIL9 109 aa9.08□□□□□ -0.96
PKP4-215ENST00000494945 VWC2LB2RUY7 222 aa9.08□□□□□ -0.96
PKP4-215ENST00000494945 SSNA1O43805 119 aa9.08□□□□□ -0.96
PKP4-215ENST00000494945 PFDN1O60925 122 aa9.08□□□□□ -0.96
PKP4-215ENST00000494945 SFT2D2O95562 160 aa9.08□□□□□ -0.96
PKP4-215ENST00000494945 IGHV3-43DP0DP04 118 aa9.08□□□□□ -0.96
PKP4-215ENST00000494945 OMGP23515 440 aa9.08□□□□□ -0.96
PKP4-215ENST00000494945 DNASE1P24855 282 aa9.08□□□□□ -0.96
PKP4-215ENST00000494945 S100GP29377 79 aa9.08□□□□□ -0.96
PKP4-215ENST00000494945 DLX6P56179 175 aa9.08□□□□□ -0.96
PKP4-215ENST00000494945 PIGPP57054 158 aa9.08□□□□□ -0.96
PKP4-215ENST00000494945 KRTAP10-9P60411 292 aa9.08□□□□□ -0.96
PKP4-215ENST00000494945 LTC4SQ16873 150 aa9.08□□□□□ -0.96
PKP4-215ENST00000494945 Q3ZCU0 254 aa9.08□□□□□ -0.96
PKP4-215ENST00000494945 LDLRAD3Q86YD5 345 aa9.08□□□□□ -0.96
PKP4-215ENST00000494945 SGPP2Q8IWX5 399 aa9.08□□□□□ -0.96
PKP4-215ENST00000494945 CMTM1Q8IZ96 169 aa9.08□□□□□ -0.96
PKP4-215ENST00000494945 ZBTB34Q8NCN2 500 aa9.08□□□□□ -0.96
PKP4-215ENST00000494945 LY6G5BQ8NDX9 201 aa9.08□□□□□ -0.96
PKP4-215ENST00000494945 OR2AK2Q8NG84 335 aa9.08□□□□□ -0.96
PKP4-215ENST00000494945 OR52B4Q8NGK2 314 aa9.08□□□□□ -0.96
PKP4-215ENST00000494945 PERPQ96FX8 193 aa9.08□□□□□ -0.96
PKP4-215ENST00000494945 NARFLQ9H6Q4 476 aa9.08□□□□□ -0.96
PKP4-215ENST00000494945 CCL28Q9NRJ3 127 aa9.08□□□□□ -0.96
PKP4-215ENST00000494945 APCP25054 2843 aa9.08□□□□□ -0.96
PKP4-215ENST00000494945 A0A0B4J2A0 478 aa9.07□□□□□ -0.96
PKP4-215ENST00000494945 PPIAL4CA0A0B4J2A2 164 aa9.07□□□□□ -0.96
PKP4-215ENST00000494945 hCG_1809904A0A1W2PP81 198 aa9.07□□□□□ -0.96
PKP4-215ENST00000494945 A0A1W2PPE2 198 aa9.07□□□□□ -0.96
PKP4-215ENST00000494945 A0A1W2PR64 198 aa9.07□□□□□ -0.96
PKP4-215ENST00000494945 A0A1W2PRV1 198 aa9.07□□□□□ -0.96
PKP4-215ENST00000494945 C17orf98A8MV24 154 aa9.07□□□□□ -0.96
PKP4-215ENST00000494945 A8MXK9 166 aa9.07□□□□□ -0.96
PKP4-215ENST00000494945 DUS4LO95620 317 aaKnown RBP9.07□□□□□ -0.96
PKP4-215ENST00000494945 LIPFP07098 398 aa9.07□□□□□ -0.96
PKP4-215ENST00000494945 OR8U9P0C7N5 309 aa9.07□□□□□ -0.96
PKP4-215ENST00000494945 PPIAL4GP0DN37 164 aa9.07□□□□□ -0.96
PKP4-215ENST00000494945 ANXA3P12429 323 aa9.07□□□□□ -0.96
PKP4-215ENST00000494945 CCL3L1P16619 93 aa9.07□□□□□ -0.96
PKP4-215ENST00000494945 VAMP1P23763 118 aa9.07□□□□□ -0.96
PKP4-215ENST00000494945 RAB7AP51149 207 aa9.07□□□□□ -0.96
PKP4-215ENST00000494945 LMO4P61968 165 aa9.07□□□□□ -0.96
PKP4-215ENST00000494945 SUPT4H1P63272 117 aaKnown RBP9.07□□□□□ -0.96
PKP4-215ENST00000494945 PHLDA2Q53GA4 152 aa9.07□□□□□ -0.96
PKP4-215ENST00000494945 PRAMEF5Q5TYX0 476 aa9.07□□□□□ -0.96
PKP4-215ENST00000494945 ZNF818PQ6ZRF7 136 aa9.07□□□□□ -0.96
PKP4-215ENST00000494945 KCTD9Q7L273 389 aa9.07□□□□□ -0.96
PKP4-215ENST00000494945 LRRC75A-AS1Q8N1F1 130 aa9.07□□□□□ -0.96
PKP4-215ENST00000494945 C12orf45Q8N5I9 185 aaPredicted RBP9.07□□□□□ -0.96
PKP4-215ENST00000494945 ZNF645Q8N7E2 425 aa9.07□□□□□ -0.96
PKP4-215ENST00000494945 BVESQ8NE79 360 aa9.07□□□□□ -0.96
PKP4-215ENST00000494945 OR8U1Q8NH10 309 aa9.07□□□□□ -0.96
PKP4-215ENST00000494945 CLDND2Q8NHS1 167 aa9.07□□□□□ -0.96
PKP4-215ENST00000494945 MITD1Q8WV92 249 aa9.07□□□□□ -0.96
PKP4-215ENST00000494945 RTN4IP1Q8WWV3 396 aaPredicted RBP9.07□□□□□ -0.96
PKP4-215ENST00000494945 GALNT14Q96FL9 552 aa9.07□□□□□ -0.96
PKP4-215ENST00000494945 PHB2Q99623 299 aa9.07□□□□□ -0.96
PKP4-215ENST00000494945 PARP12Q9H0J9 701 aaKnown RBP9.07□□□□□ -0.96
PKP4-215ENST00000494945 NAA60Q9H7X0 242 aa9.07□□□□□ -0.96
PKP4-215ENST00000494945 SHPKQ9UHJ6 478 aa9.07□□□□□ -0.96
PKP4-215ENST00000494945 KCNIP3Q9Y2W7 256 aa9.07□□□□□ -0.96
PKP4-215ENST00000494945 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.06□□□□□ -0.965e-14■■■□□ 14.7
PKP4-215ENST00000494945 LOC105371242A0A075B767 164 aa9.06□□□□□ -0.96
PKP4-215ENST00000494945 A0A087X0M5 115 aa9.06□□□□□ -0.96
PKP4-215ENST00000494945 TEX13DA0A0J9YY54 714 aaPredicted RBP9.06□□□□□ -0.96
PKP4-215ENST00000494945 A0A1B0GX30 115 aa9.06□□□□□ -0.96
PKP4-215ENST00000494945 HSD17B6O14756 317 aa9.06□□□□□ -0.96
PKP4-215ENST00000494945 MPPED1O15442 326 aa9.06□□□□□ -0.96
PKP4-215ENST00000494945 PHF1O43189 567 aaPredicted RBP9.06□□□□□ -0.96
PKP4-215ENST00000494945 B3GALNT1O75752 331 aa9.06□□□□□ -0.96
PKP4-215ENST00000494945 IFNA2P01563 188 aa9.06□□□□□ -0.96
PKP4-215ENST00000494945 IGLV2-14P01704 120 aa9.06□□□□□ -0.96
PKP4-215ENST00000494945 SULT1A3P0DMM9 295 aa9.06□□□□□ -0.96
PKP4-215ENST00000494945 SULT1A4P0DMN0 295 aa9.06□□□□□ -0.96
PKP4-215ENST00000494945 NFYBP25208 207 aa9.06□□□□□ -0.96
PKP4-215ENST00000494945 CD34P28906 385 aa9.06□□□□□ -0.96
PKP4-215ENST00000494945 FAM53AQ6NSI3 398 aaPredicted RBP9.06□□□□□ -0.96
PKP4-215ENST00000494945 AKAP14Q86UN6 197 aa9.06□□□□□ -0.96
PKP4-215ENST00000494945 C8orf31Q8N9H6 132 aa9.06□□□□□ -0.96
PKP4-215ENST00000494945 ZNF439Q8NDP4 499 aa9.06□□□□□ -0.96
PKP4-215ENST00000494945 MBD6Q96DN6 1003 aa9.06□□□□□ -0.96
PKP4-215ENST00000494945 AGMATQ9BSE5 352 aa9.06□□□□□ -0.96
PKP4-215ENST00000494945 ABHD14AQ9BUJ0 271 aa9.06□□□□□ -0.96
PKP4-215ENST00000494945 SUCNR1Q9BXA5 334 aa9.06□□□□□ -0.96
PKP4-215ENST00000494945 OR2D2Q9H210 308 aa9.06□□□□□ -0.96
PKP4-215ENST00000494945 KCNS2Q9ULS6 477 aa9.06□□□□□ -0.96
PKP4-215ENST00000494945 PSG11Q9UQ72 335 aa9.06□□□□□ -0.96
PKP4-215ENST00000494945 FBN2P35556 2912 aa9.06□□□□□ -0.96
PKP4-215ENST00000494945 RNF212BA8MTL3 300 aa9.05□□□□□ -0.96
PKP4-215ENST00000494945 KIAA1324LA8MWY0 1029 aaPredicted RBP9.05□□□□□ -0.96
PKP4-215ENST00000494945 C22orf46C9J442 243 aa9.05□□□□□ -0.96
PKP4-215ENST00000494945 FOXH1O75593 365 aa9.05□□□□□ -0.96
PKP4-215ENST00000494945 PGLYRP1O75594 196 aaPredicted RBP9.05□□□□□ -0.96
PKP4-215ENST00000494945 MMP23AO75900 390 aa9.05□□□□□ -0.96
PKP4-215ENST00000494945 IGHV1-8P0DP01 117 aa9.05□□□□□ -0.96
PKP4-215ENST00000494945 SLC25A16P16260 332 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms