RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 OR10Z1Q8NGY1 313 aa2.3□□□□□ -2.04
SMC4-224ENST00000494612 SFXN5Q8TD22 340 aa2.3□□□□□ -2.04
SMC4-224ENST00000494612 DDI1Q8WTU0 396 aa2.3□□□□□ -2.04
SMC4-224ENST00000494612 YIPF6Q96EC8 236 aa2.3□□□□□ -2.04
SMC4-224ENST00000494612 ANKRD36BP1Q96IX9 119 aa2.3□□□□□ -2.04
SMC4-224ENST00000494612 SERPINB11Q96P15 392 aa2.3□□□□□ -2.04
SMC4-224ENST00000494612 PKMYT1Q99640 499 aa2.3□□□□□ -2.04
SMC4-224ENST00000494612 C20orf144Q9BQM9 153 aa2.3□□□□□ -2.04
SMC4-224ENST00000494612 SHANK2-AS3Q9BTD1 123 aa2.3□□□□□ -2.04
SMC4-224ENST00000494612 MS4A8Q9BY19 250 aa2.3□□□□□ -2.04
SMC4-224ENST00000494612 TBL1XR1Q9BZK7 514 aa2.3□□□□□ -2.04
SMC4-224ENST00000494612 TMBIM4Q9HC24 238 aa2.3□□□□□ -2.04
SMC4-224ENST00000494612 DAZ1Q9NQZ3 744 aaKnown RBP2.3□□□□□ -2.04
SMC4-224ENST00000494612 FBXL12Q9NXK8 326 aa2.3□□□□□ -2.04
SMC4-224ENST00000494612 CFL2Q9Y281 166 aa2.3□□□□□ -2.04
SMC4-224ENST00000494612 ORC6Q9Y5N6 252 aa2.3□□□□□ -2.04
SMC4-224ENST00000494612 COL6A6A6NMZ7 2263 aa2.3□□□□□ -2.04
SMC4-224ENST00000494612 UBR5O95071 2799 aaPredicted RBP2.3□□□□□ -2.04
SMC4-224ENST00000494612 SPENQ96T58 3664 aaKnown RBP2.29□□□□□ -2.04
SMC4-224ENST00000494612 TEX15Q9BXT5 2789 aa2.29□□□□□ -2.04
SMC4-224ENST00000494612 IGHV2OR16-5A0A0B4J2B6 119 aa2.29□□□□□ -2.04
SMC4-224ENST00000494612 FAM240AA0A1B0GVK7 77 aa2.29□□□□□ -2.04
SMC4-224ENST00000494612 VPS37CA5D8V6 355 aaPredicted RBP2.29□□□□□ -2.04
SMC4-224ENST00000494612 GOLGA8IPA6NC78 632 aa2.29□□□□□ -2.04
SMC4-224ENST00000494612 RNASEK-C17orf49H0YIS7 233 aa2.29□□□□□ -2.04
SMC4-224ENST00000494612 CLDN34H7C241 214 aa2.29□□□□□ -2.04
SMC4-224ENST00000494612 OR7C2O60412 319 aa2.29□□□□□ -2.04
SMC4-224ENST00000494612 SCN2BO60939 215 aa2.29□□□□□ -2.04
SMC4-224ENST00000494612 CDK14O94921 469 aa2.29□□□□□ -2.04
SMC4-224ENST00000494612 TNFAIP8O95379 198 aa2.29□□□□□ -2.04
SMC4-224ENST00000494612 GP1BAP07359 652 aa2.29□□□□□ -2.04
SMC4-224ENST00000494612 OR5AL1P0C617 328 aa2.29□□□□□ -2.04
SMC4-224ENST00000494612 SEC11BP0C7V7 166 aa2.29□□□□□ -2.04
SMC4-224ENST00000494612 RD3LP0DJH9 198 aa2.29□□□□□ -2.04
SMC4-224ENST00000494612 NELFEP18615 380 aaKnown RBP2.29□□□□□ -2.04
SMC4-224ENST00000494612 PRSS3P35030 304 aa2.29□□□□□ -2.04
SMC4-224ENST00000494612 MPV17P39210 176 aa2.29□□□□□ -2.04
SMC4-224ENST00000494612 IDH2P48735 452 aaKnown RBP2.29□□□□□ -2.04
SMC4-224ENST00000494612 DSTNP60981 165 aa2.29□□□□□ -2.04
SMC4-224ENST00000494612 IL5RAQ01344 420 aa2.29□□□□□ -2.04
SMC4-224ENST00000494612 C2orf54Q08AI8 447 aa2.29□□□□□ -2.04
SMC4-224ENST00000494612 MAPRE2Q15555 327 aa2.29□□□□□ -2.04
SMC4-224ENST00000494612 CST6Q15828 149 aa2.29□□□□□ -2.04
SMC4-224ENST00000494612 SPINT4Q6UDR6 99 aa2.29□□□□□ -2.04
SMC4-224ENST00000494612 CLEC18BQ6UXF7 455 aa2.29□□□□□ -2.04
SMC4-224ENST00000494612 TMEM136Q6ZRR5 245 aa2.29□□□□□ -2.04
SMC4-224ENST00000494612 TRMT10CQ7L0Y3 403 aaKnown RBP2.29□□□□□ -2.04
SMC4-224ENST00000494612 NELFCDQ8IXH7 590 aa2.29□□□□□ -2.04
SMC4-224ENST00000494612 CA13Q8N1Q1 262 aa2.29□□□□□ -2.04
SMC4-224ENST00000494612 OR4C6Q8NH72 309 aa2.29□□□□□ -2.04
SMC4-224ENST00000494612 KLF14Q8TD94 323 aaPredicted RBP2.29□□□□□ -2.04
SMC4-224ENST00000494612 RBPMSQ93062 196 aaKnown RBP2.29□□□□□ -2.04
SMC4-224ENST00000494612 LRRC45Q96CN5 670 aa2.29□□□□□ -2.04
SMC4-224ENST00000494612 SEC22CQ9BRL7 303 aa2.29□□□□□ -2.04
SMC4-224ENST00000494612 ANGPTL4Q9BY76 406 aa2.29□□□□□ -2.04
SMC4-224ENST00000494612 PARVGQ9HBI0 331 aa2.29□□□□□ -2.04
SMC4-224ENST00000494612 SND1-IT1Q9HBX3 110 aa2.29□□□□□ -2.04
SMC4-224ENST00000494612 IFT46Q9NQC8 304 aa2.29□□□□□ -2.04
SMC4-224ENST00000494612 UBAP1Q9NZ09 502 aa2.29□□□□□ -2.04
SMC4-224ENST00000494612 SCML1Q9UN30 329 aa2.29□□□□□ -2.04
SMC4-224ENST00000494612 V9GYY5 206 aaPredicted RBP2.29□□□□□ -2.04
SMC4-224ENST00000494612 PTPRQQ9UMZ3 2332 aa2.29□□□□□ -2.04
SMC4-224ENST00000494612 DOPEY2Q9Y3R5 2298 aa2.28□□□□□ -2.04
SMC4-224ENST00000494612 SMLR1H3BR10 107 aa2.28□□□□□ -2.04
SMC4-224ENST00000494612 M0R1B8 84 aa2.28□□□□□ -2.04
SMC4-224ENST00000494612 SULT1C2O00338 296 aa2.28□□□□□ -2.04
SMC4-224ENST00000494612 ZNF593O00488 134 aaPredicted RBP2.28□□□□□ -2.04
SMC4-224ENST00000494612 TOR1AO14656 332 aa2.28□□□□□ -2.04
SMC4-224ENST00000494612 GATCO43716 136 aaKnown RBP2.28□□□□□ -2.04
SMC4-224ENST00000494612 MAGEA6P43360 314 aa2.28□□□□□ -2.04
SMC4-224ENST00000494612 PSMD8P48556 350 aa2.28□□□□□ -2.04
SMC4-224ENST00000494612 PSMB2P49721 201 aa2.28□□□□□ -2.04
SMC4-224ENST00000494612 OR12D2P58182 307 aa2.28□□□□□ -2.04
SMC4-224ENST00000494612 TSPAN5P62079 268 aa2.28□□□□□ -2.04
SMC4-224ENST00000494612 RPS11P62280 158 aaKnown RBP eCLIP2.28□□□□□ -2.04
SMC4-224ENST00000494612 GTF2BQ00403 316 aa2.28□□□□□ -2.04
SMC4-224ENST00000494612 SRSF6Q13247 344 aaKnown RBP2.28□□□□□ -2.04
SMC4-224ENST00000494612 FAM53BQ14153 422 aa2.28□□□□□ -2.04
SMC4-224ENST00000494612 PMVKQ15126 192 aa2.28□□□□□ -2.04
SMC4-224ENST00000494612 GUSBP1Q15486 140 aa2.28□□□□□ -2.04
SMC4-224ENST00000494612 TTC32Q5I0X7 151 aa2.28□□□□□ -2.04
SMC4-224ENST00000494612 TMEM215Q68D42 235 aa2.28□□□□□ -2.04
SMC4-224ENST00000494612 C16orf47Q6ZP98 133 aaPredicted RBP2.28□□□□□ -2.04
SMC4-224ENST00000494612 LRRC6Q86X45 466 aa2.28□□□□□ -2.04
SMC4-224ENST00000494612 CALHM3Q86XJ0 350 aa2.28□□□□□ -2.04
SMC4-224ENST00000494612 SLC25A45Q8N413 288 aa2.28□□□□□ -2.04
SMC4-224ENST00000494612 LINC00304Q8N9R0 145 aa2.28□□□□□ -2.04
SMC4-224ENST00000494612 ZNF680Q8NEM1 530 aa2.28□□□□□ -2.04
SMC4-224ENST00000494612 OR8G5Q8NG78 346 aa2.28□□□□□ -2.04
SMC4-224ENST00000494612 OR2M7Q8NG81 312 aa2.28□□□□□ -2.04
SMC4-224ENST00000494612 SMARCD1Q96GM5 515 aa2.28□□□□□ -2.04
SMC4-224ENST00000494612 C8orf76Q96K31 380 aa2.28□□□□□ -2.04
SMC4-224ENST00000494612 ARL5BQ96KC2 179 aa2.28□□□□□ -2.04
SMC4-224ENST00000494612 PDCD1LG2Q9BQ51 273 aa2.28□□□□□ -2.04
SMC4-224ENST00000494612 SLC38A1Q9H2H9 487 aa2.28□□□□□ -2.04
SMC4-224ENST00000494612 ACOT13Q9NPJ3 140 aa2.28□□□□□ -2.04
SMC4-224ENST00000494612 AP3M1Q9Y2T2 418 aa2.28□□□□□ -2.04
SMC4-224ENST00000494612 ATP6V1DQ9Y5K8 247 aa2.28□□□□□ -2.04
SMC4-224ENST00000494612 URGCP-MRPS24S4R325 110 aa2.28□□□□□ -2.04
SMC4-224ENST00000494612 ZFC3H1O60293 1989 aaKnown RBP2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms