RNA–Protein interactions for RNA: ENST00000494123.5

BRCA1-223, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-223ENST00000494123 NECAP2Q9NVZ3 263 aa11.83□□□□□ -0.52
BRCA1-223ENST00000494123 RDH8Q9NYR8 311 aa11.83□□□□□ -0.52
BRCA1-223ENST00000494123 KLK11Q9UBX7 282 aa11.83□□□□□ -0.52
BRCA1-223ENST00000494123 ANAPC10Q9UM13 185 aa11.83□□□□□ -0.52
BRCA1-223ENST00000494123 FN1P02751 2386 aaKnown RBP11.83□□□□□ -0.52
BRCA1-223ENST00000494123 A0A0U1RQK1 487 aa11.82□□□□□ -0.52
BRCA1-223ENST00000494123 LEUTXA8MZ59 168 aa11.82□□□□□ -0.52
BRCA1-223ENST00000494123 FBP1P09467 338 aa11.82□□□□□ -0.52
BRCA1-223ENST00000494123 IL3RAP26951 378 aa11.82□□□□□ -0.52
BRCA1-223ENST00000494123 HLA-DMAP28067 261 aa11.82□□□□□ -0.52
BRCA1-223ENST00000494123 CEACAM3P40198 252 aa11.82□□□□□ -0.52
BRCA1-223ENST00000494123 ETV6P41212 452 aa11.82□□□□□ -0.52
BRCA1-223ENST00000494123 MINOS1Q5TGZ0 78 aa11.82□□□□□ -0.52
BRCA1-223ENST00000494123 SLC25A48Q6ZT89 311 aaKnown RBP11.82□□□□□ -0.52
BRCA1-223ENST00000494123 LHFPL4Q7Z7J7 247 aa11.82□□□□□ -0.52
BRCA1-223ENST00000494123 ZNF439Q8NDP4 499 aa11.82□□□□□ -0.52
BRCA1-223ENST00000494123 OR5H2Q8NGV7 314 aa11.82□□□□□ -0.52
BRCA1-223ENST00000494123 SLC6A7Q99884 636 aa11.82□□□□□ -0.52
BRCA1-223ENST00000494123 OCEL1Q9H607 264 aa11.82□□□□□ -0.52
BRCA1-223ENST00000494123 ZNRD1Q9P1U0 126 aa11.82□□□□□ -0.52
BRCA1-223ENST00000494123 MTFP1Q9UDX5 166 aa11.82□□□□□ -0.52
BRCA1-223ENST00000494123 SOX21Q9Y651 276 aaPredicted RBP11.82□□□□□ -0.52
BRCA1-223ENST00000494123 MINOS1-NBL1R4GNA1 71 aa11.82□□□□□ -0.52
BRCA1-223ENST00000494123 BUB1B-PAK6H3BSN5 160 aa11.82□□□□□ -0.52
BRCA1-223ENST00000494123 SLC31A2O15432 143 aa11.82□□□□□ -0.52
BRCA1-223ENST00000494123 NAT1P18440 290 aa11.82□□□□□ -0.52
BRCA1-223ENST00000494123 RAB7AP51149 207 aa11.82□□□□□ -0.52
BRCA1-223ENST00000494123 ZNF134P52741 427 aa11.82□□□□□ -0.52
BRCA1-223ENST00000494123 CDK10Q15131 360 aa11.82□□□□□ -0.52
BRCA1-223ENST00000494123 CT45A1Q5HYN5 189 aa11.82□□□□□ -0.52
BRCA1-223ENST00000494123 LY6G6FQ5SQ64 297 aa11.82□□□□□ -0.52
BRCA1-223ENST00000494123 RBMS3Q6XE24 437 aaKnown RBP11.82□□□□□ -0.52
BRCA1-223ENST00000494123 LINC00311Q8N616 119 aa11.82□□□□□ -0.52
BRCA1-223ENST00000494123 CT45A3Q8NHU0 189 aa11.82□□□□□ -0.52
BRCA1-223ENST00000494123 ZDHHC16Q969W1 377 aa11.82□□□□□ -0.52
BRCA1-223ENST00000494123 MALSU1Q96EH3 234 aa11.82□□□□□ -0.52
BRCA1-223ENST00000494123 DPM3Q9P2X0 92 aa11.82□□□□□ -0.52
BRCA1-223ENST00000494123 HILPDAQ9Y5L2 63 aa11.82□□□□□ -0.52
BRCA1-223ENST00000494123 ZNF736B4DX44 427 aaPredicted RBP11.81□□□□□ -0.52
BRCA1-223ENST00000494123 GSTZ1O43708 216 aaPredicted RBP11.81□□□□□ -0.52
BRCA1-223ENST00000494123 PMP2P02689 132 aa11.81□□□□□ -0.52
BRCA1-223ENST00000494123 SSBP1Q04837 148 aaKnown RBP11.81□□□□□ -0.52
BRCA1-223ENST00000494123 ZNF79Q15937 498 aa11.81□□□□□ -0.52
BRCA1-223ENST00000494123 SSX2Q16385 188 aa11.81□□□□□ -0.52
BRCA1-223ENST00000494123 DEFB112Q30KQ8 113 aa11.81□□□□□ -0.52
BRCA1-223ENST00000494123 LINC00299Q6ZSB3 139 aa11.81□□□□□ -0.52
BRCA1-223ENST00000494123 H1FOOQ8IZA3 346 aaPredicted RBP11.81□□□□□ -0.52
BRCA1-223ENST00000494123 LYG1Q8N1E2 194 aa11.81□□□□□ -0.52
BRCA1-223ENST00000494123 Q8N402 240 aa11.81□□□□□ -0.52
BRCA1-223ENST00000494123 RPEQ96AT9 228 aa11.81□□□□□ -0.52
BRCA1-223ENST00000494123 PARP12Q9H0J9 701 aaKnown RBP11.81□□□□□ -0.52
BRCA1-223ENST00000494123 EHFQ9NZC4 300 aa11.81□□□□□ -0.52
BRCA1-223ENST00000494123 RBM7Q9Y580 266 aaKnown RBP11.81□□□□□ -0.52
BRCA1-223ENST00000494123 MDFIC2A0A1B0GVS7 189 aa11.8□□□□□ -0.52
BRCA1-223ENST00000494123 ST8SIA5O15466 376 aa11.8□□□□□ -0.52
BRCA1-223ENST00000494123 CSF1P09603 554 aa11.8□□□□□ -0.52
BRCA1-223ENST00000494123 OR5H8P0DN80 308 aa11.8□□□□□ -0.52
BRCA1-223ENST00000494123 NFYAP23511 347 aaPredicted RBP11.8□□□□□ -0.52
BRCA1-223ENST00000494123 HRH1P35367 487 aa11.8□□□□□ -0.52
BRCA1-223ENST00000494123 ZNF45Q02386 682 aa11.8□□□□□ -0.52
BRCA1-223ENST00000494123 ACTBL2Q562R1 376 aa11.8□□□□□ -0.52
BRCA1-223ENST00000494123 LURAP1LQ8IV03 231 aa11.8□□□□□ -0.52
BRCA1-223ENST00000494123 LYSMD2Q8IV50 215 aa11.8□□□□□ -0.52
BRCA1-223ENST00000494123 C17orf50Q8WW18 174 aa11.8□□□□□ -0.52
BRCA1-223ENST00000494123 TOMM40LQ969M1 308 aa11.8□□□□□ -0.52
BRCA1-223ENST00000494123 THAP7Q9BT49 309 aaPredicted RBP11.8□□□□□ -0.52
BRCA1-223ENST00000494123 TOLLIPQ9H0E2 274 aa11.8□□□□□ -0.52
BRCA1-223ENST00000494123 C11orf54Q9H0W9 315 aaPredicted RBP11.8□□□□□ -0.52
BRCA1-223ENST00000494123 MXRA5Q9NR99 2828 aa11.8□□□□□ -0.52
BRCA1-223ENST00000494123 ITGB1BP1O14713 200 aa11.79□□□□□ -0.52
BRCA1-223ENST00000494123 RFX2P48378 723 aa11.79□□□□□ -0.52
BRCA1-223ENST00000494123 ARHGDIBP52566 201 aa11.79□□□□□ -0.52
BRCA1-223ENST00000494123 TAS2R19P59542 299 aa11.79□□□□□ -0.52
BRCA1-223ENST00000494123 PLA1AQ53H76 456 aa11.79□□□□□ -0.52
BRCA1-223ENST00000494123 TPTE2P1Q5T6R2 138 aa11.79□□□□□ -0.52
BRCA1-223ENST00000494123 SIGLECL1Q8N7X8 197 aa11.79□□□□□ -0.52
BRCA1-223ENST00000494123 ZNF418Q8TF45 676 aaPredicted RBP11.79□□□□□ -0.52
BRCA1-223ENST00000494123 S100ZQ8WXG8 99 aa11.79□□□□□ -0.52
BRCA1-223ENST00000494123 TAS2R8Q9NYW2 309 aa11.79□□□□□ -0.52
BRCA1-223ENST00000494123 RBMX2Q9Y388 322 aaKnown RBP11.79□□□□□ -0.52
BRCA1-223ENST00000494123 OR2W1Q9Y3N9 320 aa11.79□□□□□ -0.52
BRCA1-223ENST00000494123 HSD17B6O14756 317 aa11.78□□□□□ -0.52
BRCA1-223ENST00000494123 OR8U9P0C7N5 309 aa11.78□□□□□ -0.52
BRCA1-223ENST00000494123 PAX6P26367 422 aa11.78□□□□□ -0.52
BRCA1-223ENST00000494123 FCGR2CP31995 323 aa11.78□□□□□ -0.52
BRCA1-223ENST00000494123 TSPAN5P62079 268 aa11.78□□□□□ -0.52
BRCA1-223ENST00000494123 DYRK1AQ13627 763 aa11.78□□□□□ -0.52
BRCA1-223ENST00000494123 RNASE10Q5GAN6 216 aaKnown RBP11.78□□□□□ -0.52
BRCA1-223ENST00000494123 LDLRAD2Q5SZI1 272 aa11.78□□□□□ -0.52
BRCA1-223ENST00000494123 CCDC144NLQ6NUI1 221 aa11.78□□□□□ -0.52
BRCA1-223ENST00000494123 OVCH2Q7RTZ1 564 aa11.78□□□□□ -0.52
BRCA1-223ENST00000494123 GDPD1Q8N9F7 314 aa11.78□□□□□ -0.52
BRCA1-223ENST00000494123 TMEM229BQ8NBD8 167 aa11.78□□□□□ -0.52
BRCA1-223ENST00000494123 OR8U1Q8NH10 309 aa11.78□□□□□ -0.52
BRCA1-223ENST00000494123 AJUBAQ96IF1 538 aa11.78□□□□□ -0.52
BRCA1-223ENST00000494123 ZNF48Q96MX3 618 aaPredicted RBP11.78□□□□□ -0.52
BRCA1-223ENST00000494123 SRRQ9GZT4 340 aa11.78□□□□□ -0.52
BRCA1-223ENST00000494123 IFI27L2Q9H2X8 130 aa11.78□□□□□ -0.52
BRCA1-223ENST00000494123 GHITMQ9H3K2 345 aa11.78□□□□□ -0.52
BRCA1-223ENST00000494123 PIPOXQ9P0Z9 390 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms