RNA–Protein interactions for RNA: ENST00000493903.1

GTF3A-208, Transcript of general transcription factor IIIA, humanhuman

TSL 3

Gene GTF3A, Length 748 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-208ENST00000493903 C11orf49Q9H6J7 331 aa2.9□□□□□ -1.95
GTF3A-208ENST00000493903 TRIM45Q9H8W5 580 aaPredicted RBP2.9□□□□□ -1.95
GTF3A-208ENST00000493903 WFDC1Q9HC57 220 aa2.9□□□□□ -1.95
GTF3A-208ENST00000493903 UBQLN4Q9NRR5 601 aa2.9□□□□□ -1.95
GTF3A-208ENST00000493903 CA10Q9NS85 328 aa2.9□□□□□ -1.95
GTF3A-208ENST00000493903 TBX21Q9UL17 535 aa2.9□□□□□ -1.95
GTF3A-208ENST00000493903 ZNF780BQ9Y6R6 833 aa2.9□□□□□ -1.95
GTF3A-208ENST00000493903 DNAH12Q6ZR08 3092 aa2.9□□□□□ -1.95
GTF3A-208ENST00000493903 BDP1A6H8Y1 2624 aa2.89□□□□□ -1.95
GTF3A-208ENST00000493903 DOCK2Q92608 1830 aa2.89□□□□□ -1.95
GTF3A-208ENST00000493903 XIRP2A4UGR9 3374 aa2.89□□□□□ -1.95
GTF3A-208ENST00000493903 C21orf140B9A014 251 aa2.89□□□□□ -1.95
GTF3A-208ENST00000493903 TGOLN2O43493 480 aa2.89□□□□□ -1.95
GTF3A-208ENST00000493903 SCGB1C2P0DMR2 95 aa2.89□□□□□ -1.95
GTF3A-208ENST00000493903 CFL1P23528 166 aaKnown RBP2.89□□□□□ -1.95
GTF3A-208ENST00000493903 RAP1GDS1P52306 607 aa2.89□□□□□ -1.95
GTF3A-208ENST00000493903 RAB25P57735 213 aa2.89□□□□□ -1.95
GTF3A-208ENST00000493903 TAS2R43P59537 309 aa2.89□□□□□ -1.95
GTF3A-208ENST00000493903 ATP5G2Q06055 141 aa2.89□□□□□ -1.95
GTF3A-208ENST00000493903 CKAP4Q07065 602 aaKnown RBP2.89□□□□□ -1.95
GTF3A-208ENST00000493903 STX5Q13190 355 aa2.89□□□□□ -1.95
GTF3A-208ENST00000493903 DOCK1Q14185 1865 aa2.89□□□□□ -1.95
GTF3A-208ENST00000493903 SPIN4Q56A73 249 aa2.89□□□□□ -1.95
GTF3A-208ENST00000493903 ZNF773Q6PK81 442 aa2.89□□□□□ -1.95
GTF3A-208ENST00000493903 CD200R1LQ6Q8B3 271 aa2.89□□□□□ -1.95
GTF3A-208ENST00000493903 SHISA6Q6ZSJ9 500 aa2.89□□□□□ -1.95
GTF3A-208ENST00000493903 ZNF786Q8N393 782 aa2.89□□□□□ -1.95
GTF3A-208ENST00000493903 RIBC1Q8N443 379 aaPredicted RBP2.89□□□□□ -1.95
GTF3A-208ENST00000493903 ZIC4Q8N9L1 334 aa2.89□□□□□ -1.95
GTF3A-208ENST00000493903 LINC01560Q8TB33 94 aa2.89□□□□□ -1.95
GTF3A-208ENST00000493903 CIRBP-AS1Q8TBR5 109 aa2.89□□□□□ -1.95
GTF3A-208ENST00000493903 SCGB1C1Q8TD33 95 aa2.89□□□□□ -1.95
GTF3A-208ENST00000493903 ASB13Q8WXK3 278 aa2.89□□□□□ -1.95
GTF3A-208ENST00000493903 ANKRD7Q92527 254 aa2.89□□□□□ -1.95
GTF3A-208ENST00000493903 SLC25A46Q96AG3 418 aa2.89□□□□□ -1.95
GTF3A-208ENST00000493903 PPCDCQ96CD2 204 aa2.89□□□□□ -1.95
GTF3A-208ENST00000493903 OLFM3Q96PB7 478 aa2.89□□□□□ -1.95
GTF3A-208ENST00000493903 RNF157Q96PX1 679 aa2.89□□□□□ -1.95
GTF3A-208ENST00000493903 TMEM208Q9BTX3 173 aa2.89□□□□□ -1.95
GTF3A-208ENST00000493903 MS4A6AQ9H2W1 248 aa2.89□□□□□ -1.95
GTF3A-208ENST00000493903 TAS2R9Q9NYW1 312 aa2.89□□□□□ -1.95
GTF3A-208ENST00000493903 TAC3Q9UHF0 121 aa2.89□□□□□ -1.95
GTF3A-208ENST00000493903 GUCA1BQ9UMX6 200 aa2.89□□□□□ -1.95
GTF3A-208ENST00000493903 C14orf166Q9Y224 244 aaKnown RBP2.89□□□□□ -1.95
GTF3A-208ENST00000493903 NUP214P35658 2090 aaPredicted RBP2.89□□□□□ -1.95
GTF3A-208ENST00000493903 ANKRD12Q6UB98 2062 aa2.89□□□□□ -1.95
GTF3A-208ENST00000493903 LOXHD1Q8IVV2 1947 aa2.89□□□□□ -1.95
GTF3A-208ENST00000493903 CHD9Q3L8U1 2897 aa2.89□□□□□ -1.95
GTF3A-208ENST00000493903 SVILO95425 2214 aa2.88□□□□□ -1.95
GTF3A-208ENST00000493903 IGLV4-69A0A075B6H9 119 aa2.88□□□□□ -1.95
GTF3A-208ENST00000493903 WI2-2373I1.2A0A1W2PRP0 233 aa2.88□□□□□ -1.95
GTF3A-208ENST00000493903 METTL15A6NJ78 407 aa2.88□□□□□ -1.95
GTF3A-208ENST00000493903 F5H5T6 163 aa2.88□□□□□ -1.95
GTF3A-208ENST00000493903 TMEM250H0YL14 139 aa2.88□□□□□ -1.95
GTF3A-208ENST00000493903 LGALS9O00182 355 aa2.88□□□□□ -1.95
GTF3A-208ENST00000493903 RBFOX2O43251 390 aaKnown RBP eCLIP2.88□□□□□ -1.95
GTF3A-208ENST00000493903 RPP14O95059 124 aaKnown RBP2.88□□□□□ -1.95
GTF3A-208ENST00000493903 VAMP5O95183 116 aa2.88□□□□□ -1.95
GTF3A-208ENST00000493903 TYMSP04818 313 aa2.88□□□□□ -1.95
GTF3A-208ENST00000493903 CALB1P05937 261 aa2.88□□□□□ -1.95
GTF3A-208ENST00000493903 SOD3P08294 240 aa2.88□□□□□ -1.95
GTF3A-208ENST00000493903 AGTR1P30556 359 aa2.88□□□□□ -1.95
GTF3A-208ENST00000493903 ACTBP60709 375 aa2.88□□□□□ -1.95
GTF3A-208ENST00000493903 ACTG1P63261 375 aa2.88□□□□□ -1.95
GTF3A-208ENST00000493903 LCE1FQ5T754 118 aa2.88□□□□□ -1.95
GTF3A-208ENST00000493903 Q5W150 140 aa2.88□□□□□ -1.95
GTF3A-208ENST00000493903 TMEM215Q68D42 235 aa2.88□□□□□ -1.95
GTF3A-208ENST00000493903 ZFP1Q6P2D0 407 aa2.88□□□□□ -1.95
GTF3A-208ENST00000493903 CLEC20AQ6ZU45 233 aa2.88□□□□□ -1.95
GTF3A-208ENST00000493903 OLIG3Q7RTU3 272 aa2.88□□□□□ -1.95
GTF3A-208ENST00000493903 PDPNQ86YL7 162 aa2.88□□□□□ -1.95
GTF3A-208ENST00000493903 ITPRIPQ8IWB1 547 aa2.88□□□□□ -1.95
GTF3A-208ENST00000493903 STK40Q8N2I9 435 aa2.88□□□□□ -1.95
GTF3A-208ENST00000493903 ZNF433Q8N7K0 673 aaPredicted RBP2.88□□□□□ -1.95
GTF3A-208ENST00000493903 ZDHHC22Q8N966 263 aa2.88□□□□□ -1.95
GTF3A-208ENST00000493903 OR2Z1Q8NG97 314 aa2.88□□□□□ -1.95
GTF3A-208ENST00000493903 OR9A2Q8NGT5 310 aa2.88□□□□□ -1.95
GTF3A-208ENST00000493903 TWIST2Q8WVJ9 160 aa2.88□□□□□ -1.95
GTF3A-208ENST00000493903 CLDN23Q96B33 292 aa2.88□□□□□ -1.95
GTF3A-208ENST00000493903 TAMM41Q96BW9 452 aa2.88□□□□□ -1.95
GTF3A-208ENST00000493903 LINC01587Q99440 93 aa2.88□□□□□ -1.95
GTF3A-208ENST00000493903 STACQ99469 402 aa2.88□□□□□ -1.95
GTF3A-208ENST00000493903 ANAPC13Q9BS18 74 aa2.88□□□□□ -1.95
GTF3A-208ENST00000493903 CDCA4Q9BXL8 241 aa2.88□□□□□ -1.95
GTF3A-208ENST00000493903 C21orf62Q9NYP8 219 aa2.88□□□□□ -1.95
GTF3A-208ENST00000493903 TAS2R5Q9NYW4 299 aa2.88□□□□□ -1.95
GTF3A-208ENST00000493903 EMC3Q9P0I2 261 aa2.88□□□□□ -1.95
GTF3A-208ENST00000493903 C3orf18Q9UK00 162 aa2.88□□□□□ -1.95
GTF3A-208ENST00000493903 PIEZO1Q92508 2521 aa2.88□□□□□ -1.95
GTF3A-208ENST00000493903 DOCK3Q8IZD9 2030 aa2.88□□□□□ -1.95
GTF3A-208ENST00000493903 CLUHO75153 1309 aa2.88□□□□□ -1.95
GTF3A-208ENST00000493903 CHD7Q9P2D1 2997 aa2.88□□□□□ -1.95
GTF3A-208ENST00000493903 REV3LO60673 3130 aa2.87□□□□□ -1.95
GTF3A-208ENST00000493903 CROCCQ5TZA2 2017 aa2.87□□□□□ -1.95
GTF3A-208ENST00000493903 IGHV1-3A0A0C4DH29 117 aa2.87□□□□□ -1.95
GTF3A-208ENST00000493903 IGKV1-6A0A0C4DH72 117 aa2.87□□□□□ -1.95
GTF3A-208ENST00000493903 GMNCA6NCL1 334 aa2.87□□□□□ -1.95
GTF3A-208ENST00000493903 ACOX3O15254 700 aa2.87□□□□□ -1.95
GTF3A-208ENST00000493903 TRAPPC3O43617 180 aa2.87□□□□□ -1.95
GTF3A-208ENST00000493903 FOXH1O75593 365 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms