RNA–Protein interactions for RNA: ENST00000493864.1

TRA2B-216, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-216ENST00000493864 KAAG1Q9UBP8 84 aa5.4□□□□□ -1.54
TRA2B-216ENST00000493864 CTSZQ9UBR2 303 aa5.4□□□□□ -1.54
TRA2B-216ENST00000493864 MTFP1Q9UDX5 166 aa5.4□□□□□ -1.54
TRA2B-216ENST00000493864 KIF25Q9UIL4 384 aa5.4□□□□□ -1.54
TRA2B-216ENST00000493864 CSPG4Q6UVK1 2322 aa5.39□□□□□ -1.55
TRA2B-216ENST00000493864 IGHV4-30-2A0A087WSY4 118 aa5.39□□□□□ -1.55
TRA2B-216ENST00000493864 MEIKINA0A087WXM9 373 aa5.39□□□□□ -1.55
TRA2B-216ENST00000493864 A0A1W2PQ09 198 aa5.39□□□□□ -1.55
TRA2B-216ENST00000493864 TMEM30CPA0ZSE6 113 aa5.39□□□□□ -1.55
TRA2B-216ENST00000493864 NKX6-3A6NJ46 265 aa5.39□□□□□ -1.55
TRA2B-216ENST00000493864 PRYO14603 147 aa5.39□□□□□ -1.55
TRA2B-216ENST00000493864 NDUFB3O43676 98 aa5.39□□□□□ -1.55
TRA2B-216ENST00000493864 RBMXL2O75526 392 aaKnown RBP5.39□□□□□ -1.55
TRA2B-216ENST00000493864 UPK1BO75841 260 aa5.39□□□□□ -1.55
TRA2B-216ENST00000493864 FCGR3AP08637 254 aa5.39□□□□□ -1.55
TRA2B-216ENST00000493864 RPS2P15880 293 aaKnown RBP5.39□□□□□ -1.55
TRA2B-216ENST00000493864 EDDM3BP56851 147 aa5.39□□□□□ -1.55
TRA2B-216ENST00000493864 FAM3BP58499 235 aaPredicted RBP5.39□□□□□ -1.55
TRA2B-216ENST00000493864 RPL15P61313 204 aaKnown RBP5.39□□□□□ -1.55
TRA2B-216ENST00000493864 SEC61A1P61619 476 aaKnown RBP5.39□□□□□ -1.55
TRA2B-216ENST00000493864 LMO4P61968 165 aa5.39□□□□□ -1.55
TRA2B-216ENST00000493864 MRPS10P82664 201 aaKnown RBP5.39□□□□□ -1.55
TRA2B-216ENST00000493864 EDDM3AQ14507 147 aa5.39□□□□□ -1.55
TRA2B-216ENST00000493864 KRBOX4Q5JUW0 171 aa5.39□□□□□ -1.55
TRA2B-216ENST00000493864 SHEQ5VZ18 495 aa5.39□□□□□ -1.55
TRA2B-216ENST00000493864 OR52W1Q6IF63 320 aa5.39□□□□□ -1.55
TRA2B-216ENST00000493864 ZNF880Q6PDB4 577 aa5.39□□□□□ -1.55
TRA2B-216ENST00000493864 C16orf87Q6PH81 154 aa5.39□□□□□ -1.55
TRA2B-216ENST00000493864 CLEC2AQ6UVW9 174 aa5.39□□□□□ -1.55
TRA2B-216ENST00000493864 ZNF66Q6ZN08 573 aa5.39□□□□□ -1.55
TRA2B-216ENST00000493864 GDPD3Q7L5L3 318 aa5.39□□□□□ -1.55
TRA2B-216ENST00000493864 HOGA1Q86XE5 327 aa5.39□□□□□ -1.55
TRA2B-216ENST00000493864 GAPTQ8N292 157 aa5.39□□□□□ -1.55
TRA2B-216ENST00000493864 MUC20Q8N307 709 aaPredicted RBP5.39□□□□□ -1.55
TRA2B-216ENST00000493864 CLDND2Q8NHS1 167 aa5.39□□□□□ -1.55
TRA2B-216ENST00000493864 UBALD1Q8TB05 177 aa5.39□□□□□ -1.55
TRA2B-216ENST00000493864 SETD6Q8TBK2 473 aa5.39□□□□□ -1.55
TRA2B-216ENST00000493864 BORCS5Q969J3 196 aa5.39□□□□□ -1.55
TRA2B-216ENST00000493864 TRIM63Q969Q1 353 aa5.39□□□□□ -1.55
TRA2B-216ENST00000493864 KRTAP4-2Q9BYR5 136 aa5.39□□□□□ -1.55
TRA2B-216ENST00000493864 BPESC1Q9GZL8 116 aa5.39□□□□□ -1.55
TRA2B-216ENST00000493864 FAM234AQ9H0X4 552 aa5.39□□□□□ -1.55
TRA2B-216ENST00000493864 RIMS4Q9H426 269 aaPredicted RBP5.39□□□□□ -1.55
TRA2B-216ENST00000493864 PATZ1Q9HBE1 687 aaKnown RBP5.39□□□□□ -1.55
TRA2B-216ENST00000493864 SEPSECSQ9HD40 501 aaKnown RBP5.39□□□□□ -1.55
TRA2B-216ENST00000493864 Q9N2K0 584 aa5.39□□□□□ -1.55
TRA2B-216ENST00000493864 C12orf4Q9NQ89 552 aa5.39□□□□□ -1.55
TRA2B-216ENST00000493864 LIN7CQ9NUP9 197 aaKnown RBP5.39□□□□□ -1.55
TRA2B-216ENST00000493864 SLC25A10Q9UBX3 287 aaPredicted RBP5.39□□□□□ -1.55
TRA2B-216ENST00000493864 MIOXQ9UGB7 285 aa5.39□□□□□ -1.55
TRA2B-216ENST00000493864 RBMX2Q9Y388 322 aaKnown RBP5.39□□□□□ -1.55
TRA2B-216ENST00000493864 C2CD3Q4AC94 2353 aa5.39□□□□□ -1.55
TRA2B-216ENST00000493864 ABCA2Q9BZC7 2435 aa5.39□□□□□ -1.55
TRA2B-216ENST00000493864 NF1P21359 2839 aa5.38□□□□□ -1.55
TRA2B-216ENST00000493864 TRBV6-6A0A0A6YYG2 114 aa5.38□□□□□ -1.55
TRA2B-216ENST00000493864 IGHV4-61A0A0C4DH41 118 aa5.38□□□□□ -1.55
TRA2B-216ENST00000493864 ANKRD20A5PA0PJZ0 165 aa5.38□□□□□ -1.55
TRA2B-216ENST00000493864 ODAMA1E959 279 aa5.38□□□□□ -1.55
TRA2B-216ENST00000493864 TRDCB7Z8K6 153 aa5.38□□□□□ -1.55
TRA2B-216ENST00000493864 F5H0A9 414 aaPredicted RBP5.38□□□□□ -1.55
TRA2B-216ENST00000493864 NDUFS8O00217 210 aa5.38□□□□□ -1.55
TRA2B-216ENST00000493864 PLA2G10O15496 165 aa5.38□□□□□ -1.55
TRA2B-216ENST00000493864 PHF1O43189 567 aaPredicted RBP5.38□□□□□ -1.55
TRA2B-216ENST00000493864 IGHV2-5P01817 119 aa5.38□□□□□ -1.55
TRA2B-216ENST00000493864 CD3DP04234 171 aa5.38□□□□□ -1.55
TRA2B-216ENST00000493864 CSN2P05814 226 aa5.38□□□□□ -1.55
TRA2B-216ENST00000493864 SCTP09683 121 aa5.38□□□□□ -1.55
TRA2B-216ENST00000493864 GSTT2P0CG29 244 aa5.38□□□□□ -1.55
TRA2B-216ENST00000493864 GSTT2BP0CG30 244 aa5.38□□□□□ -1.55
TRA2B-216ENST00000493864 CGB3P0DN86 165 aa5.38□□□□□ -1.55
TRA2B-216ENST00000493864 CGB7P0DN87 165 aa5.38□□□□□ -1.55
TRA2B-216ENST00000493864 DTYMKP23919 212 aa5.38□□□□□ -1.55
TRA2B-216ENST00000493864 HLA-DMAP28067 261 aa5.38□□□□□ -1.55
TRA2B-216ENST00000493864 ERP29P30040 261 aaKnown RBP5.38□□□□□ -1.55
TRA2B-216ENST00000493864 RCVRNP35243 200 aa5.38□□□□□ -1.55
TRA2B-216ENST00000493864 CBX5P45973 191 aa5.38□□□□□ -1.55
TRA2B-216ENST00000493864 RFX2P48378 723 aa5.38□□□□□ -1.55
TRA2B-216ENST00000493864 KCNJ3P48549 501 aa5.38□□□□□ -1.55
TRA2B-216ENST00000493864 P2RX3P56373 397 aa5.38□□□□□ -1.55
TRA2B-216ENST00000493864 DSCR9P59020 149 aa5.38□□□□□ -1.55
TRA2B-216ENST00000493864 MRPS15P82914 257 aaKnown RBP5.38□□□□□ -1.55
TRA2B-216ENST00000493864 KLF9Q13886 244 aaPredicted RBP5.38□□□□□ -1.55
TRA2B-216ENST00000493864 CLEC12BQ2HXU8 276 aa5.38□□□□□ -1.55
TRA2B-216ENST00000493864 LRRC10Q5BKY1 277 aa5.38□□□□□ -1.55
TRA2B-216ENST00000493864 TRIQKQ629K1 86 aa5.38□□□□□ -1.55
TRA2B-216ENST00000493864 WDR25Q64LD2 544 aaPredicted RBP5.38□□□□□ -1.55
TRA2B-216ENST00000493864 ZNF57Q68EA5 555 aaPredicted RBP5.38□□□□□ -1.55
TRA2B-216ENST00000493864 LRRC75A-AS1Q8N1F1 130 aa5.38□□□□□ -1.55
TRA2B-216ENST00000493864 SPICQ8N5J4 248 aa5.38□□□□□ -1.55
TRA2B-216ENST00000493864 TMEM229BQ8NBD8 167 aa5.38□□□□□ -1.55
TRA2B-216ENST00000493864 BEST4Q8NFU0 473 aa5.38□□□□□ -1.55
TRA2B-216ENST00000493864 OR8B3Q8NGG8 313 aa5.38□□□□□ -1.55
TRA2B-216ENST00000493864 OR13A1Q8NGR1 328 aa5.38□□□□□ -1.55
TRA2B-216ENST00000493864 RFESDQ8TAC1 157 aa5.38□□□□□ -1.55
TRA2B-216ENST00000493864 MRGPRDQ8TDS7 321 aa5.38□□□□□ -1.55
TRA2B-216ENST00000493864 DDB2Q92466 427 aa5.38□□□□□ -1.55
TRA2B-216ENST00000493864 H1FXQ92522 213 aaKnown RBP5.38□□□□□ -1.55
TRA2B-216ENST00000493864 SNAPC3Q92966 411 aa5.38□□□□□ -1.55
TRA2B-216ENST00000493864 OR8B2Q96RD0 313 aa5.38□□□□□ -1.55
TRA2B-216ENST00000493864 PIMREGQ9BSJ6 248 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms