RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 A0A1W2PPV4 95 aa5.91□□□□□ -1.46
VPS13B-205ENST00000493587 SLC17A3O00476 420 aa5.91□□□□□ -1.46
VPS13B-205ENST00000493587 STATHP02808 62 aa5.91□□□□□ -1.46
VPS13B-205ENST00000493587 THY1P04216 161 aa5.91□□□□□ -1.46
VPS13B-205ENST00000493587 CISD3P0C7P0 127 aa5.91□□□□□ -1.46
VPS13B-205ENST00000493587 IGLL1P15814 213 aa5.91□□□□□ -1.46
VPS13B-205ENST00000493587 ZNF17P17021 662 aa5.91□□□□□ -1.46
VPS13B-205ENST00000493587 TIMP3P35625 211 aa5.91□□□□□ -1.46
VPS13B-205ENST00000493587 SSR2P43308 183 aa5.91□□□□□ -1.46
VPS13B-205ENST00000493587 IL13RA2Q14627 380 aa5.91□□□□□ -1.46
VPS13B-205ENST00000493587 ZNF77Q15935 545 aa5.91□□□□□ -1.46
VPS13B-205ENST00000493587 PHLDA2Q53GA4 152 aa5.91□□□□□ -1.46
VPS13B-205ENST00000493587 C1QL3Q5VWW1 255 aa5.91□□□□□ -1.46
VPS13B-205ENST00000493587 LYZL2Q7Z4W2 148 aa5.91□□□□□ -1.46
VPS13B-205ENST00000493587 MRGPRGQ86SM5 289 aa5.91□□□□□ -1.46
VPS13B-205ENST00000493587 FBXL14Q8N1E6 418 aa5.91□□□□□ -1.46
VPS13B-205ENST00000493587 RERGQ96A58 199 aaPredicted RBP5.91□□□□□ -1.46
VPS13B-205ENST00000493587 HSPB8Q9UJY1 196 aa5.91□□□□□ -1.46
VPS13B-205ENST00000493587 PRR32B1ATL7 298 aa5.91□□□□□ -1.46
VPS13B-205ENST00000493587 OR11H12B2RN74 326 aa5.91□□□□□ -1.46
VPS13B-205ENST00000493587 P2RY10O00398 339 aa5.91□□□□□ -1.46
VPS13B-205ENST00000493587 ANGPTL7O43827 346 aa5.91□□□□□ -1.46
VPS13B-205ENST00000493587 TYMSP04818 313 aa5.91□□□□□ -1.46
VPS13B-205ENST00000493587 SMIM17P0DL12 118 aa5.91□□□□□ -1.46
VPS13B-205ENST00000493587 HIST1H1TP22492 207 aaPredicted RBP5.91□□□□□ -1.46
VPS13B-205ENST00000493587 CYB561P49447 251 aa5.91□□□□□ -1.46
VPS13B-205ENST00000493587 SNU13P55769 128 aaKnown RBP5.91□□□□□ -1.46
VPS13B-205ENST00000493587 WDR38Q5JTN6 314 aa5.91□□□□□ -1.46
VPS13B-205ENST00000493587 ZNF562Q6V9R5 426 aa5.91□□□□□ -1.46
VPS13B-205ENST00000493587 CDC20BQ86Y33 519 aa5.91□□□□□ -1.46
VPS13B-205ENST00000493587 OR11H1Q8NG94 326 aa5.91□□□□□ -1.46
VPS13B-205ENST00000493587 OR11H2Q8NH07 326 aa5.91□□□□□ -1.46
VPS13B-205ENST00000493587 ZNRF4Q8WWF5 429 aa5.91□□□□□ -1.46
VPS13B-205ENST00000493587 PPP1R14AQ96A00 147 aa5.91□□□□□ -1.46
VPS13B-205ENST00000493587 EAF1Q96JC9 268 aaPredicted RBP5.91□□□□□ -1.46
VPS13B-205ENST00000493587 P2RX4Q99571 388 aa5.91□□□□□ -1.46
VPS13B-205ENST00000493587 RTN4RQ9BZR6 473 aa5.91□□□□□ -1.46
VPS13B-205ENST00000493587 CHRNA10Q9GZZ6 450 aa5.91□□□□□ -1.46
VPS13B-205ENST00000493587 GLIPR2Q9H4G4 154 aa5.91□□□□□ -1.46
VPS13B-205ENST00000493587 WDR54Q9H977 334 aa5.91□□□□□ -1.46
VPS13B-205ENST00000493587 ZNF443Q9Y2A4 671 aaPredicted RBP5.91□□□□□ -1.46
VPS13B-205ENST00000493587 ARHGAP21Q5T5U3 1957 aa5.91□□□□□ -1.46
VPS13B-205ENST00000493587 FANCMQ8IYD8 2048 aa5.91□□□□□ -1.46
VPS13B-205ENST00000493587 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.91□□□□□ -1.46
VPS13B-205ENST00000493587 H3BP45 60 aa5.91□□□□□ -1.46
VPS13B-205ENST00000493587 H7C1C5 153 aa5.91□□□□□ -1.46
VPS13B-205ENST00000493587 CCL16O15467 120 aa5.91□□□□□ -1.46
VPS13B-205ENST00000493587 GATA2P23769 480 aaPredicted RBP5.91□□□□□ -1.46
VPS13B-205ENST00000493587 MEF2BQ02080 365 aaPredicted RBP5.91□□□□□ -1.46
VPS13B-205ENST00000493587 IL15RAQ13261 267 aa5.91□□□□□ -1.46
VPS13B-205ENST00000493587 PCK2Q16822 640 aa5.91□□□□□ -1.46
VPS13B-205ENST00000493587 TSPO2Q5TGU0 170 aa5.91□□□□□ -1.46
VPS13B-205ENST00000493587 FA2HQ7L5A8 372 aa5.91□□□□□ -1.46
VPS13B-205ENST00000493587 OR8B12Q8NGG6 310 aa5.91□□□□□ -1.46
VPS13B-205ENST00000493587 SLC25A40Q8TBP6 338 aa5.91□□□□□ -1.46
VPS13B-205ENST00000493587 NANOS1Q8WY41 292 aaKnown RBP5.91□□□□□ -1.46
VPS13B-205ENST00000493587 PECRQ9BY49 303 aa5.91□□□□□ -1.46
VPS13B-205ENST00000493587 PKIBQ9C010 78 aa5.91□□□□□ -1.46
VPS13B-205ENST00000493587 OR2D2Q9H210 308 aa5.91□□□□□ -1.46
VPS13B-205ENST00000493587 NKX2-4Q9H2Z4 354 aa5.91□□□□□ -1.46
VPS13B-205ENST00000493587 SLC7A10Q9NS82 523 aa5.91□□□□□ -1.46
VPS13B-205ENST00000493587 ENTPD2Q9Y5L3 495 aa5.91□□□□□ -1.46
VPS13B-205ENST00000493587 TNFRSF18Q9Y5U5 241 aa5.91□□□□□ -1.46
VPS13B-205ENST00000493587 TRBV5-7A0A0A0MS05 114 aa5.9□□□□□ -1.46
VPS13B-205ENST00000493587 SIRPB1O00241 398 aa5.9□□□□□ -1.46
VPS13B-205ENST00000493587 HTR1DP28221 377 aa5.9□□□□□ -1.46
VPS13B-205ENST00000493587 BSGP35613 385 aa5.9□□□□□ -1.46
VPS13B-205ENST00000493587 CFHR2P36980 270 aa5.9□□□□□ -1.46
VPS13B-205ENST00000493587 GPR1P46091 355 aa5.9□□□□□ -1.46
VPS13B-205ENST00000493587 PLCXD2Q0VAA5 305 aa5.9□□□□□ -1.46
VPS13B-205ENST00000493587 PDGFRLQ15198 375 aa5.9□□□□□ -1.46
VPS13B-205ENST00000493587 NRN1LQ496H8 165 aa5.9□□□□□ -1.46
VPS13B-205ENST00000493587 CDCP2Q5VXM1 449 aa5.9□□□□□ -1.46
VPS13B-205ENST00000493587 CARD17Q5XLA6 110 aa5.9□□□□□ -1.46
VPS13B-205ENST00000493587 TMEM64Q6YI46 380 aa5.9□□□□□ -1.46
VPS13B-205ENST00000493587 TMEM25Q86YD3 366 aa5.9□□□□□ -1.46
VPS13B-205ENST00000493587 C20orf196Q8IYI0 205 aa5.9□□□□□ -1.46
VPS13B-205ENST00000493587 ZIC4Q8N9L1 334 aa5.9□□□□□ -1.46
VPS13B-205ENST00000493587 CCDC71LQ8N9Z2 235 aa5.9□□□□□ -1.46
VPS13B-205ENST00000493587 NUP43Q8NFH3 380 aa5.9□□□□□ -1.46
VPS13B-205ENST00000493587 OR10X1Q8NGY0 326 aa5.9□□□□□ -1.46
VPS13B-205ENST00000493587 NPFFR1Q9GZQ6 430 aa5.9□□□□□ -1.46
VPS13B-205ENST00000493587 ST20Q9HBF5 79 aa5.9□□□□□ -1.46
VPS13B-205ENST00000493587 RPRMQ9NS64 109 aa5.9□□□□□ -1.46
VPS13B-205ENST00000493587 CD207Q9UJ71 328 aa5.9□□□□□ -1.46
VPS13B-205ENST00000493587 HILPDAQ9Y5L2 63 aa5.9□□□□□ -1.46
VPS13B-205ENST00000493587 PDE4DIPQ5VU43 2346 aa5.9□□□□□ -1.46
VPS13B-205ENST00000493587 CPAMD8Q8IZJ3 1885 aa5.9□□□□□ -1.46
VPS13B-205ENST00000493587 OTOL1A6NHN0 477 aaPredicted RBP5.9□□□□□ -1.46
VPS13B-205ENST00000493587 EPOPA6NHQ4 379 aa5.9□□□□□ -1.46
VPS13B-205ENST00000493587 NGFRP08138 427 aa5.9□□□□□ -1.46
VPS13B-205ENST00000493587 SPINK8P0C7L1 97 aa5.9□□□□□ -1.46
VPS13B-205ENST00000493587 HIST1H1EP10412 219 aaKnown RBP5.9□□□□□ -1.46
VPS13B-205ENST00000493587 IGFBP2P18065 325 aa5.9□□□□□ -1.46
VPS13B-205ENST00000493587 NPBWR2P48146 333 aa5.9□□□□□ -1.46
VPS13B-205ENST00000493587 RPL15P61313 204 aaKnown RBP5.9□□□□□ -1.46
VPS13B-205ENST00000493587 HERV-K104P61576 105 aa5.9□□□□□ -1.46
VPS13B-205ENST00000493587 FMODQ06828 376 aa5.9□□□□□ -1.46
VPS13B-205ENST00000493587 PRTGQ2VWP7 1150 aa5.9□□□□□ -1.46
VPS13B-205ENST00000493587 INO80CQ6PI98 192 aaPredicted RBP5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms