RNA–Protein interactions for RNA: ENST00000493582.5

HDAC4-210, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,188 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-210ENST00000493582 OR8B8Q15620 311 aa9.97□□□□□ -0.81
HDAC4-210ENST00000493582 MSMO1Q15800 293 aa9.97□□□□□ -0.81
HDAC4-210ENST00000493582 FFAR4Q5NUL3 377 aa9.97□□□□□ -0.81
HDAC4-210ENST00000493582 AGBL5Q8NDL9 886 aa9.97□□□□□ -0.81
HDAC4-210ENST00000493582 ZNF501Q96CX3 271 aaPredicted RBP9.97□□□□□ -0.81
HDAC4-210ENST00000493582 C10orf35Q96D05 121 aa9.97□□□□□ -0.81
HDAC4-210ENST00000493582 SAMD10Q9BYL1 202 aa9.97□□□□□ -0.81
HDAC4-210ENST00000493582 UBE2ZQ9H832 354 aaPredicted RBP9.97□□□□□ -0.81
HDAC4-210ENST00000493582 ELOVL5Q9NYP7 299 aa9.97□□□□□ -0.81
HDAC4-210ENST00000493582 ASXL3Q9C0F0 2248 aa9.97□□□□□ -0.81
HDAC4-210ENST00000493582 IGKV1-6A0A0C4DH72 117 aa9.97□□□□□ -0.81
HDAC4-210ENST00000493582 H0Y980 276 aa9.97□□□□□ -0.81
HDAC4-210ENST00000493582 NAPSAO96009 420 aa9.97□□□□□ -0.81
HDAC4-210ENST00000493582 HNF1AP20823 631 aa9.97□□□□□ -0.81
HDAC4-210ENST00000493582 CD38P28907 300 aa9.97□□□□□ -0.81
HDAC4-210ENST00000493582 PLPPR5Q32ZL2 321 aa9.97□□□□□ -0.81
HDAC4-210ENST00000493582 ASCL4Q6XD76 172 aa9.97□□□□□ -0.81
HDAC4-210ENST00000493582 NEIL1Q96FI4 390 aaPredicted RBP9.97□□□□□ -0.81
HDAC4-210ENST00000493582 TECTBQ96PL2 329 aa9.97□□□□□ -0.81
HDAC4-210ENST00000493582 WIPI2Q9Y4P8 454 aa9.97□□□□□ -0.81
HDAC4-210ENST00000493582 THADAQ6YHU6 1953 aa9.97□□□□□ -0.81
HDAC4-210ENST00000493582 IGHV3-15A0A0B4J1V0 119 aa9.96□□□□□ -0.81
HDAC4-210ENST00000493582 ZNF816-ZNF321PA0A0X1KG74 233 aa9.96□□□□□ -0.81
HDAC4-210ENST00000493582 SH2D1BO14796 132 aa9.96□□□□□ -0.81
HDAC4-210ENST00000493582 CDKN1BP46527 198 aa9.96□□□□□ -0.81
HDAC4-210ENST00000493582 ZNF468Q5VIY5 522 aaPredicted RBP9.96□□□□□ -0.81
HDAC4-210ENST00000493582 OR10G9Q8NGN4 311 aa9.96□□□□□ -0.81
HDAC4-210ENST00000493582 OR10G7Q8NGN6 311 aa9.96□□□□□ -0.81
HDAC4-210ENST00000493582 SPTSSAQ969W0 71 aa9.96□□□□□ -0.81
HDAC4-210ENST00000493582 BTF3L4Q96K17 158 aa9.96□□□□□ -0.81
HDAC4-210ENST00000493582 HS3ST6Q96QI5 342 aa9.96□□□□□ -0.81
HDAC4-210ENST00000493582 TRIOO75962 3097 aa9.96□□□□□ -0.81
HDAC4-210ENST00000493582 C11orf94C9JXX5 98 aa9.96□□□□□ -0.82
HDAC4-210ENST00000493582 TLX3O43711 291 aaPredicted RBP9.96□□□□□ -0.82
HDAC4-210ENST00000493582 VENTXO95231 258 aa9.96□□□□□ -0.82
HDAC4-210ENST00000493582 PATE4P0C8F1 98 aa9.96□□□□□ -0.82
HDAC4-210ENST00000493582 CRISP2P16562 243 aa9.96□□□□□ -0.82
HDAC4-210ENST00000493582 DRD1P21728 446 aa9.96□□□□□ -0.82
HDAC4-210ENST00000493582 KLF3P57682 345 aaPredicted RBP9.96□□□□□ -0.82
HDAC4-210ENST00000493582 RPS16P62249 146 aaKnown RBP9.96□□□□□ -0.82
HDAC4-210ENST00000493582 RNPS1Q15287 305 aaKnown RBP9.96□□□□□ -0.82
HDAC4-210ENST00000493582 Q6ZSR3 168 aa9.96□□□□□ -0.82
HDAC4-210ENST00000493582 LHFPL2Q6ZUX7 228 aa9.96□□□□□ -0.82
HDAC4-210ENST00000493582 BAGE3Q86Y29 109 aa9.96□□□□□ -0.82
HDAC4-210ENST00000493582 BAGE2Q86Y30 109 aa9.96□□□□□ -0.82
HDAC4-210ENST00000493582 PIGCQ92535 297 aa9.96□□□□□ -0.82
HDAC4-210ENST00000493582 NABP1Q96AH0 204 aa9.96□□□□□ -0.82
HDAC4-210ENST00000493582 RNF208Q9H0X6 261 aa9.96□□□□□ -0.82
HDAC4-210ENST00000493582 FBXL7Q9UJT9 491 aa9.96□□□□□ -0.82
HDAC4-210ENST00000493582 CD300LBA8K4G0 201 aa9.96□□□□□ -0.82
HDAC4-210ENST00000493582 MLNRO43193 412 aa9.96□□□□□ -0.82
HDAC4-210ENST00000493582 RBFOX2O43251 390 aaKnown RBP eCLIP9.96□□□□□ -0.828e-8■■■■■ 378.8
HDAC4-210ENST00000493582 NDUFB4O95168 129 aa9.96□□□□□ -0.82
HDAC4-210ENST00000493582 LHX2P50458 406 aa9.96□□□□□ -0.82
HDAC4-210ENST00000493582 UBE2G2P60604 165 aa9.96□□□□□ -0.82
HDAC4-210ENST00000493582 SLC38A11Q08AI6 406 aa9.96□□□□□ -0.82
HDAC4-210ENST00000493582 SPATA45Q537H7 98 aa9.96□□□□□ -0.82
HDAC4-210ENST00000493582 UNQ5815/PRO19632Q6UWF5 114 aa9.96□□□□□ -0.82
HDAC4-210ENST00000493582 Q6ZN92 141 aa9.96□□□□□ -0.82
HDAC4-210ENST00000493582 TXN2Q99757 166 aa9.96□□□□□ -0.82
HDAC4-210ENST00000493582 ZNF703Q9H7S9 590 aaPredicted RBP9.96□□□□□ -0.82
HDAC4-210ENST00000493582 LAMTOR2Q9Y2Q5 125 aa9.96□□□□□ -0.82
HDAC4-210ENST00000493582 CTXND1A0A1B0GTU2 59 aa9.95□□□□□ -0.82
HDAC4-210ENST00000493582 HS3ST1O14792 307 aa9.95□□□□□ -0.82
HDAC4-210ENST00000493582 IGKV1-39P01597 117 aa9.95□□□□□ -0.82
HDAC4-210ENST00000493582 IGKV1D-39P04432 117 aa9.95□□□□□ -0.82
HDAC4-210ENST00000493582 FRMD6-AS1P0C7T7 363 aa9.95□□□□□ -0.82
HDAC4-210ENST00000493582 FOXL1Q12952 345 aa9.95□□□□□ -0.82
HDAC4-210ENST00000493582 NOGQ13253 232 aa9.95□□□□□ -0.82
HDAC4-210ENST00000493582 TMPRSS7Q7RTY8 843 aa9.95□□□□□ -0.82
HDAC4-210ENST00000493582 IL36RNQ9UBH0 155 aa9.95□□□□□ -0.82
HDAC4-210ENST00000493582 LOC105371242A0A075B767 164 aa9.95□□□□□ -0.82
HDAC4-210ENST00000493582 GNB1P62873 340 aa9.95□□□□□ -0.82
HDAC4-210ENST00000493582 PLCXD3Q63HM9 321 aa9.95□□□□□ -0.82
HDAC4-210ENST00000493582 PARM1Q6UWI2 310 aa9.95□□□□□ -0.82
HDAC4-210ENST00000493582 RABEPKQ7Z6M1 372 aa9.95□□□□□ -0.82
HDAC4-210ENST00000493582 ZNF611Q8N823 705 aa9.95□□□□□ -0.82
HDAC4-210ENST00000493582 OR5P3Q8WZ94 311 aa9.95□□□□□ -0.82
HDAC4-210ENST00000493582 PSMF1Q92530 271 aa9.95□□□□□ -0.82
HDAC4-210ENST00000493582 OR6C1Q96RD1 312 aa9.95□□□□□ -0.82
HDAC4-210ENST00000493582 ALKBH7Q9BT30 221 aaPredicted RBP9.95□□□□□ -0.82
HDAC4-210ENST00000493582 ZNF552Q9H707 407 aaPredicted RBP9.95□□□□□ -0.82
HDAC4-210ENST00000493582 SPTY2D1-AS1A0A0U1RR47 76 aa9.94□□□□□ -0.82
HDAC4-210ENST00000493582 DIRC3C9JPN6 131 aa9.94□□□□□ -0.82
HDAC4-210ENST00000493582 TUSC2O75896 110 aa9.94□□□□□ -0.82
HDAC4-210ENST00000493582 ZNF16P17020 682 aaPredicted RBP9.94□□□□□ -0.82
HDAC4-210ENST00000493582 FBLP22087 321 aaKnown RBP9.94□□□□□ -0.82
HDAC4-210ENST00000493582 THBS3P49746 956 aa9.94□□□□□ -0.82
HDAC4-210ENST00000493582 HINT1P49773 126 aaPredicted RBP9.94□□□□□ -0.82
HDAC4-210ENST00000493582 SUMO1P63165 101 aaKnown RBP9.94□□□□□ -0.82
HDAC4-210ENST00000493582 YLPM1P49750 1951 aaKnown RBP9.94□□□□□ -0.82
HDAC4-210ENST00000493582 TRANK1O15050 2925 aa9.94□□□□□ -0.82
HDAC4-210ENST00000493582 ATP5G3P48201 142 aa9.94□□□□□ -0.82
HDAC4-210ENST00000493582 UBE2V1Q13404 147 aa9.94□□□□□ -0.82
HDAC4-210ENST00000493582 ORAOV1Q8WV07 137 aa9.94□□□□□ -0.82
HDAC4-210ENST00000493582 ERRFI1Q9UJM3 462 aaPredicted RBP9.94□□□□□ -0.82
HDAC4-210ENST00000493582 SLC45A2Q9UMX9 530 aa9.94□□□□□ -0.82
HDAC4-210ENST00000493582 LOC102725191A0A1B0GVB3 256 aa9.93□□□□□ -0.82
HDAC4-210ENST00000493582 HYPMO75409 117 aa9.93□□□□□ -0.82
HDAC4-210ENST00000493582 PIAS2O75928 621 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms