RNA–Protein interactions for RNA: ENST00000493341.1

VPS13A-212, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2

Gene VPS13A, Length 2,001 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-212ENST00000493341 ALS2Q96Q42 1657 aa2.99□□□□□ -1.93
VPS13A-212ENST00000493341 YTHDC2Q9H6S0 1430 aaKnown RBP2.99□□□□□ -1.93
VPS13A-212ENST00000493341 A0A1W2PQL4 384 aaPredicted RBP2.98□□□□□ -1.93
VPS13A-212ENST00000493341 TNNC2P02585 160 aa2.98□□□□□ -1.93
VPS13A-212ENST00000493341 SLC35A2P78381 396 aa2.98□□□□□ -1.93
VPS13A-212ENST00000493341 FMODQ06828 376 aa2.98□□□□□ -1.93
VPS13A-212ENST00000493341 CLVS2Q5SYC1 327 aa2.98□□□□□ -1.93
VPS13A-212ENST00000493341 SCGB1D4Q6XE38 83 aa2.98□□□□□ -1.93
VPS13A-212ENST00000493341 DPPA2Q7Z7J5 298 aa2.98□□□□□ -1.93
VPS13A-212ENST00000493341 NAA40Q86UY6 237 aa2.98□□□□□ -1.93
VPS13A-212ENST00000493341 TRAPPC5Q8IUR0 188 aa2.98□□□□□ -1.93
VPS13A-212ENST00000493341 ANP32BQ92688 251 aaKnown RBP2.98□□□□□ -1.93
VPS13A-212ENST00000493341 VCXQ9H320 206 aa2.98□□□□□ -1.93
VPS13A-212ENST00000493341 LRP6O75581 1613 aa2.98□□□□□ -1.93
VPS13A-212ENST00000493341 NWD2Q9ULI1 1742 aa2.98□□□□□ -1.93
VPS13A-212ENST00000493341 PXDNQ92626 1479 aa2.98□□□□□ -1.93
VPS13A-212ENST00000493341 ANKARQ7Z5J8 1434 aa2.98□□□□□ -1.93
VPS13A-212ENST00000493341 TRPM1Q7Z4N2 1603 aa2.98□□□□□ -1.93
VPS13A-212ENST00000493341 MFNGO00587 321 aa2.98□□□□□ -1.93
VPS13A-212ENST00000493341 DCTN3O75935 186 aa2.98□□□□□ -1.93
VPS13A-212ENST00000493341 IFNA6P05013 189 aa2.98□□□□□ -1.93
VPS13A-212ENST00000493341 CXCL2P19875 107 aa2.98□□□□□ -1.93
VPS13A-212ENST00000493341 MIPP30301 263 aa2.98□□□□□ -1.93
VPS13A-212ENST00000493341 SP6Q3SY56 376 aa2.98□□□□□ -1.93
VPS13A-212ENST00000493341 TNFAIP8L2Q6P589 184 aaPredicted RBP2.98□□□□□ -1.93
VPS13A-212ENST00000493341 TCF23Q7RTU1 214 aa2.98□□□□□ -1.93
VPS13A-212ENST00000493341 SLC51BQ86UW2 128 aa2.98□□□□□ -1.93
VPS13A-212ENST00000493341 KRT222Q8N1A0 295 aa2.98□□□□□ -1.93
VPS13A-212ENST00000493341 NATD1Q8N6N6 113 aa2.98□□□□□ -1.93
VPS13A-212ENST00000493341 OR5K1Q8NHB7 308 aa2.98□□□□□ -1.93
VPS13A-212ENST00000493341 TNFAIP8L1Q8WVP5 186 aa2.98□□□□□ -1.93
VPS13A-212ENST00000493341 DOK1Q99704 481 aa2.98□□□□□ -1.93
VPS13A-212ENST00000493341 RTBDNQ9BSG5 229 aaPredicted RBP2.98□□□□□ -1.93
VPS13A-212ENST00000493341 BCL2L14Q9BZR8 327 aa2.98□□□□□ -1.93
VPS13A-212ENST00000493341 BTNL10A8MVZ5 291 aa2.97□□□□□ -1.93
VPS13A-212ENST00000493341 B4DEV8 164 aa2.97□□□□□ -1.93
VPS13A-212ENST00000493341 K7EPK0 472 aa2.97□□□□□ -1.93
VPS13A-212ENST00000493341 KCNK1O00180 336 aa2.97□□□□□ -1.93
VPS13A-212ENST00000493341 HBZP02008 142 aa2.97□□□□□ -1.93
VPS13A-212ENST00000493341 MPIP34949 423 aa2.97□□□□□ -1.93
VPS13A-212ENST00000493341 PMELP40967 661 aa2.97□□□□□ -1.93
VPS13A-212ENST00000493341 RSU1Q15404 277 aa2.97□□□□□ -1.93
VPS13A-212ENST00000493341 MESTQ5EB52 335 aa2.97□□□□□ -1.93
VPS13A-212ENST00000493341 Q5W150 140 aa2.97□□□□□ -1.93
VPS13A-212ENST00000493341 VN1R4Q7Z5H5 301 aa2.97□□□□□ -1.93
VPS13A-212ENST00000493341 GID4Q8IVV7 300 aa2.97□□□□□ -1.93
VPS13A-212ENST00000493341 OR52N1Q8NH53 320 aa2.97□□□□□ -1.93
VPS13A-212ENST00000493341 MFSD8Q8NHS3 518 aa2.97□□□□□ -1.93
VPS13A-212ENST00000493341 EEF1AKMT1Q8WVE0 214 aa2.97□□□□□ -1.93
VPS13A-212ENST00000493341 ITLN2Q8WWU7 325 aaPredicted RBP2.97□□□□□ -1.93
VPS13A-212ENST00000493341 TLCD1Q96CP7 247 aa2.97□□□□□ -1.93
VPS13A-212ENST00000493341 FOPNLQ96NB1 174 aa2.97□□□□□ -1.93
VPS13A-212ENST00000493341 RNF5Q99942 180 aa2.97□□□□□ -1.93
VPS13A-212ENST00000493341 XPNPEP1Q9NQW7 623 aa2.97□□□□□ -1.93
VPS13A-212ENST00000493341 TMEM216Q9P0N5 145 aa2.97□□□□□ -1.93
VPS13A-212ENST00000493341 HDGFL3Q9Y3E1 203 aa2.97□□□□□ -1.93
VPS13A-212ENST00000493341 DHX57Q6P158 1386 aaKnown RBP2.97□□□□□ -1.93
VPS13A-212ENST00000493341 DOCK9Q9BZ29 2069 aa2.97□□□□□ -1.93
VPS13A-212ENST00000493341 SVILO95425 2214 aa2.97□□□□□ -1.93
VPS13A-212ENST00000493341 LOXHD1Q8IVV2 1947 aa2.97□□□□□ -1.93
VPS13A-212ENST00000493341 NRAPQ86VF7 1730 aa2.97□□□□□ -1.93
VPS13A-212ENST00000493341 TULP4Q9NRJ4 1543 aa2.97□□□□□ -1.93
VPS13A-212ENST00000493341 PLCH1Q4KWH8 1693 aa2.97□□□□□ -1.93
VPS13A-212ENST00000493341 USP54Q70EL1 1684 aa2.97□□□□□ -1.93
VPS13A-212ENST00000493341 QRICH2Q9H0J4 1663 aa2.97□□□□□ -1.93
VPS13A-212ENST00000493341 CABIN1Q9Y6J0 2220 aa2.97□□□□□ -1.93
VPS13A-212ENST00000493341 TMEM250H0YL14 139 aa2.97□□□□□ -1.93
VPS13A-212ENST00000493341 ISLRO14498 428 aa2.97□□□□□ -1.93
VPS13A-212ENST00000493341 HLA-DRAP01903 254 aa2.97□□□□□ -1.93
VPS13A-212ENST00000493341 IFNA16P05015 189 aa2.97□□□□□ -1.93
VPS13A-212ENST00000493341 IL6P05231 212 aa2.97□□□□□ -1.93
VPS13A-212ENST00000493341 HIST1H1EP10412 219 aaKnown RBP2.97□□□□□ -1.93
VPS13A-212ENST00000493341 H2BFSP57053 126 aa2.97□□□□□ -1.93
VPS13A-212ENST00000493341 GABARAPL2P60520 117 aa2.97□□□□□ -1.93
VPS13A-212ENST00000493341 MRPS25P82663 173 aaKnown RBP2.97□□□□□ -1.93
VPS13A-212ENST00000493341 HPCAP84074 193 aa2.97□□□□□ -1.93
VPS13A-212ENST00000493341 AESQ08117 197 aa2.97□□□□□ -1.93
VPS13A-212ENST00000493341 PTGES3Q15185 160 aaKnown RBP2.97□□□□□ -1.93
VPS13A-212ENST00000493341 TRMT12Q53H54 448 aaKnown RBP2.97□□□□□ -1.93
VPS13A-212ENST00000493341 C1orf195Q5TG92 126 aa2.97□□□□□ -1.93
VPS13A-212ENST00000493341 TMEM215Q68D42 235 aa2.97□□□□□ -1.93
VPS13A-212ENST00000493341 LAIR2Q6ISS4 152 aa2.97□□□□□ -1.93
VPS13A-212ENST00000493341 OR1M1Q8NGA1 313 aa2.97□□□□□ -1.93
VPS13A-212ENST00000493341 OR9I1Q8NGQ6 314 aa2.97□□□□□ -1.93
VPS13A-212ENST00000493341 OR1P1Q8NH06 330 aa2.97□□□□□ -1.93
VPS13A-212ENST00000493341 UBALD1Q8TB05 177 aa2.97□□□□□ -1.93
VPS13A-212ENST00000493341 FRZBQ92765 325 aa2.97□□□□□ -1.93
VPS13A-212ENST00000493341 TMBIM1Q969X1 311 aa2.97□□□□□ -1.93
VPS13A-212ENST00000493341 REEP6Q96HR9 211 aa2.97□□□□□ -1.93
VPS13A-212ENST00000493341 ZSCAN16Q9H4T2 348 aaPredicted RBP2.97□□□□□ -1.93
VPS13A-212ENST00000493341 DKKL1Q9UK85 242 aa2.97□□□□□ -1.93
VPS13A-212ENST00000493341 POLR1DQ9Y2S0 133 aa2.97□□□□□ -1.93
VPS13A-212ENST00000493341 BAZ2AQ9UIF9 1905 aaKnown RBP2.97□□□□□ -1.93
VPS13A-212ENST00000493341 AKAP12Q02952 1782 aa2.96□□□□□ -1.94
VPS13A-212ENST00000493341 A0A1W2PP64 1363 aa2.96□□□□□ -1.94
VPS13A-212ENST00000493341 EIF3AQ14152 1382 aaKnown RBP2.96□□□□□ -1.94
VPS13A-212ENST00000493341 NRASP01111 189 aa2.96□□□□□ -1.94
VPS13A-212ENST00000493341 HRASP01112 189 aa2.96□□□□□ -1.94
VPS13A-212ENST00000493341 KRASP01116 189 aa2.96□□□□□ -1.94
VPS13A-212ENST00000493341 TCRBP04435 133 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms