RNA–Protein interactions for RNA: ENST00000493265.2

LIME1-208, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 2

Gene LIME1, Length 661 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-208ENST00000493265 UNKLQ9H9P5 680 aaKnown RBP14.01□□□□□ -0.17
LIME1-208ENST00000493265 TRBV6-7A0A0A0MS04 114 aa14□□□□□ -0.17
LIME1-208ENST00000493265 IGHV1-69DA0A0B4J2H0 117 aa14□□□□□ -0.17
LIME1-208ENST00000493265 LINC00854A0A1B0GVQ3 168 aa14□□□□□ -0.17
LIME1-208ENST00000493265 SLC31A2O15432 143 aa14□□□□□ -0.17
LIME1-208ENST00000493265 RGS11O94810 467 aa14□□□□□ -0.17
LIME1-208ENST00000493265 IGHV1-69P01742 117 aa14□□□□□ -0.17
LIME1-208ENST00000493265 CSF1P09603 554 aa14□□□□□ -0.17
LIME1-208ENST00000493265 CTXN2P0C2S0 81 aa14□□□□□ -0.17
LIME1-208ENST00000493265 OR5H8P0DN80 308 aa14□□□□□ -0.17
LIME1-208ENST00000493265 TAS2R46P59540 309 aa14□□□□□ -0.17
LIME1-208ENST00000493265 LSAMPQ13449 338 aa14□□□□□ -0.17
LIME1-208ENST00000493265 TMEM30BQ3MIR4 351 aa14□□□□□ -0.17
LIME1-208ENST00000493265 MORN2Q502X0 79 aa14□□□□□ -0.17
LIME1-208ENST00000493265 ZNF57Q68EA5 555 aaPredicted RBP14□□□□□ -0.17
LIME1-208ENST00000493265 NANPQ8TBE9 248 aa14□□□□□ -0.17
LIME1-208ENST00000493265 SDHCQ99643 169 aaPredicted RBP14□□□□□ -0.17
LIME1-208ENST00000493265 WDR12Q9GZL7 423 aaKnown RBP14□□□□□ -0.17
LIME1-208ENST00000493265 RDH8Q9NYR8 311 aa14□□□□□ -0.17
LIME1-208ENST00000493265 RBMX2Q9Y388 322 aaKnown RBP14□□□□□ -0.17
LIME1-208ENST00000493265 HNF1AP20823 631 aa13.99□□□□□ -0.17
LIME1-208ENST00000493265 UBE2E1P51965 193 aa13.99□□□□□ -0.17
LIME1-208ENST00000493265 PRRX1P54821 245 aa13.99□□□□□ -0.17
LIME1-208ENST00000493265 LGALS4P56470 323 aa13.99□□□□□ -0.17
LIME1-208ENST00000493265 TAS2R19P59542 299 aa13.99□□□□□ -0.17
LIME1-208ENST00000493265 SSBP1Q04837 148 aaKnown RBP13.99□□□□□ -0.17
LIME1-208ENST00000493265 RNASE10Q5GAN6 216 aaKnown RBP13.99□□□□□ -0.17
LIME1-208ENST00000493265 FAAP20Q6NZ36 180 aa13.99□□□□□ -0.17
LIME1-208ENST00000493265 TMEM229BQ8NBD8 167 aa13.99□□□□□ -0.17
LIME1-208ENST00000493265 OR2AK2Q8NG84 335 aa13.99□□□□□ -0.17
LIME1-208ENST00000493265 OR9G1Q8NH87 305 aa13.99□□□□□ -0.17
LIME1-208ENST00000493265 C22orf15Q8WYQ4 148 aa13.99□□□□□ -0.17
LIME1-208ENST00000493265 TRIM63Q969Q1 353 aa13.99□□□□□ -0.17
LIME1-208ENST00000493265 TSC22D3Q99576 134 aa13.99□□□□□ -0.17
LIME1-208ENST00000493265 TINAGL1Q9GZM7 467 aaPredicted RBP13.99□□□□□ -0.17
LIME1-208ENST00000493265 TMEM160Q9NX00 188 aa13.99□□□□□ -0.17
LIME1-208ENST00000493265 RBM7Q9Y580 266 aaKnown RBP13.99□□□□□ -0.17
LIME1-208ENST00000493265 SOX21Q9Y651 276 aaPredicted RBP13.99□□□□□ -0.17
LIME1-208ENST00000493265 A0A087X0M5 115 aa13.98□□□□□ -0.17
LIME1-208ENST00000493265 A0A1B0GX30 115 aa13.98□□□□□ -0.17
LIME1-208ENST00000493265 J3QR06 171 aa13.98□□□□□ -0.17
LIME1-208ENST00000493265 NPFFO15130 113 aa13.98□□□□□ -0.17
LIME1-208ENST00000493265 ST8SIA5O15466 376 aa13.98□□□□□ -0.17
LIME1-208ENST00000493265 YPEL1O60688 119 aa13.98□□□□□ -0.17
LIME1-208ENST00000493265 RAB3DO95716 219 aa13.98□□□□□ -0.17
LIME1-208ENST00000493265 IFNA6P05013 189 aa13.98□□□□□ -0.17
LIME1-208ENST00000493265 CD34P28906 385 aa13.98□□□□□ -0.17
LIME1-208ENST00000493265 FCGR2CP31995 323 aa13.98□□□□□ -0.17
LIME1-208ENST00000493265 ZNF134P52741 427 aa13.98□□□□□ -0.17
LIME1-208ENST00000493265 PPP5CP53041 499 aa13.98□□□□□ -0.17
LIME1-208ENST00000493265 TSPAN5P62079 268 aa13.98□□□□□ -0.17
LIME1-208ENST00000493265 CT45A1Q5HYN5 189 aa13.98□□□□□ -0.17
LIME1-208ENST00000493265 STEAP1BQ6NZ63 245 aa13.98□□□□□ -0.17
LIME1-208ENST00000493265 TOMM5Q8N4H5 51 aa13.98□□□□□ -0.17
LIME1-208ENST00000493265 OR11H6Q8NGC7 330 aa13.98□□□□□ -0.17
LIME1-208ENST00000493265 OR4D10Q8NGI6 311 aa13.98□□□□□ -0.17
LIME1-208ENST00000493265 OR10X1Q8NGY0 326 aa13.98□□□□□ -0.17
LIME1-208ENST00000493265 CT45A3Q8NHU0 189 aa13.98□□□□□ -0.17
LIME1-208ENST00000493265 YPEL2Q96QA6 119 aa13.98□□□□□ -0.17
LIME1-208ENST00000493265 BEX2Q9BXY8 128 aa13.98□□□□□ -0.17
LIME1-208ENST00000493265 C11orf54Q9H0W9 315 aaPredicted RBP13.98□□□□□ -0.17
LIME1-208ENST00000493265 TAS2R8Q9NYW2 309 aa13.98□□□□□ -0.17
LIME1-208ENST00000493265 NUP50Q9UKX7 468 aa13.98□□□□□ -0.17
LIME1-208ENST00000493265 RNF150Q9ULK6 438 aa13.98□□□□□ -0.17
LIME1-208ENST00000493265 NBEAL1Q6ZS30 2694 aa13.97□□□□□ -0.17
LIME1-208ENST00000493265 ANKRD20A5PA0PJZ0 165 aa13.97□□□□□ -0.17
LIME1-208ENST00000493265 OR8U9P0C7N5 309 aa13.97□□□□□ -0.17
LIME1-208ENST00000493265 FAM157CP0CG43 387 aa13.97□□□□□ -0.17
LIME1-208ENST00000493265 AKAIN1P0CW23 69 aa13.97□□□□□ -0.17
LIME1-208ENST00000493265 IL7P13232 177 aa13.97□□□□□ -0.17
LIME1-208ENST00000493265 SAA4P35542 130 aa13.97□□□□□ -0.17
LIME1-208ENST00000493265 FXYD4P59646 89 aa13.97□□□□□ -0.17
LIME1-208ENST00000493265 ACTBL2Q562R1 376 aa13.97□□□□□ -0.17
LIME1-208ENST00000493265 ZNF626Q68DY1 528 aa13.97□□□□□ -0.17
LIME1-208ENST00000493265 LHFPL4Q7Z7J7 247 aa13.97□□□□□ -0.17
LIME1-208ENST00000493265 H1FOOQ8IZA3 346 aaPredicted RBP13.97□□□□□ -0.17
LIME1-208ENST00000493265 ZNF439Q8NDP4 499 aa13.97□□□□□ -0.17
LIME1-208ENST00000493265 OR8U1Q8NH10 309 aa13.97□□□□□ -0.17
LIME1-208ENST00000493265 ZNF596Q8TC21 504 aa13.97□□□□□ -0.17
LIME1-208ENST00000493265 ABHD14AQ9BUJ0 271 aa13.97□□□□□ -0.17
LIME1-208ENST00000493265 MS4A7Q9GZW8 240 aaPredicted RBP13.97□□□□□ -0.17
LIME1-208ENST00000493265 MMP28Q9H239 520 aa13.97□□□□□ -0.17
LIME1-208ENST00000493265 ABCB10Q9NRK6 738 aa13.97□□□□□ -0.17
LIME1-208ENST00000493265 CDC42EP3Q9UKI2 254 aa13.97□□□□□ -0.17
LIME1-208ENST00000493265 ODF3BA8MYP8 253 aa13.96□□□□□ -0.17
LIME1-208ENST00000493265 AMY2AP04746 511 aa13.96□□□□□ -0.17
LIME1-208ENST00000493265 EPHA1P21709 976 aa13.96□□□□□ -0.17
LIME1-208ENST00000493265 AADACP22760 399 aa13.96□□□□□ -0.17
LIME1-208ENST00000493265 PAX6P26367 422 aa13.96□□□□□ -0.17
LIME1-208ENST00000493265 DYRK1AQ13627 763 aa13.96□□□□□ -0.17
LIME1-208ENST00000493265 HLA-DRB5Q30154 266 aa13.96□□□□□ -0.17
LIME1-208ENST00000493265 OVCH2Q7RTZ1 564 aa13.96□□□□□ -0.17
LIME1-208ENST00000493265 BCL6BQ8N143 479 aaPredicted RBP13.96□□□□□ -0.17
LIME1-208ENST00000493265 LYG1Q8N1E2 194 aa13.96□□□□□ -0.17
LIME1-208ENST00000493265 PIP4P2Q8N4L2 257 aa13.96□□□□□ -0.17
LIME1-208ENST00000493265 TEX29Q8N6K0 151 aa13.96□□□□□ -0.17
LIME1-208ENST00000493265 OR4P4Q8NGL7 312 aa13.96□□□□□ -0.17
LIME1-208ENST00000493265 OR4C16Q8NGL9 310 aa13.96□□□□□ -0.17
LIME1-208ENST00000493265 OR56B4Q8NH76 319 aa13.96□□□□□ -0.17
LIME1-208ENST00000493265 C17orf50Q8WW18 174 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms