RNA–Protein interactions for RNA: ENST00000491825.1

CDC42SE1-205, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-205ENST00000491825 UBALD1Q8TB05 177 aa12.12□□□□□ -0.47
CDC42SE1-205ENST00000491825 NUDCD2Q8WVJ2 157 aa12.12□□□□□ -0.47
CDC42SE1-205ENST00000491825 CABLES2Q9BTV7 478 aa12.12□□□□□ -0.47
CDC42SE1-205ENST00000491825 MMP28Q9H239 520 aa12.12□□□□□ -0.47
CDC42SE1-205ENST00000491825 ADAM30Q9UKF2 790 aa12.12□□□□□ -0.47
CDC42SE1-205ENST00000491825 PSG11Q9UQ72 335 aa12.12□□□□□ -0.47
CDC42SE1-205ENST00000491825 A3GALT2U3KPV4 340 aa12.12□□□□□ -0.47
CDC42SE1-205ENST00000491825 A0A1W2PRD5 423 aa12.11□□□□□ -0.47
CDC42SE1-205ENST00000491825 A0A1W2PRF3 423 aa12.11□□□□□ -0.47
CDC42SE1-205ENST00000491825 A0A1W2PRM7 423 aa12.11□□□□□ -0.47
CDC42SE1-205ENST00000491825 FAM172BPA6NC97 362 aa12.11□□□□□ -0.47
CDC42SE1-205ENST00000491825 J3QR06 171 aa12.11□□□□□ -0.47
CDC42SE1-205ENST00000491825 TOR1AO14656 332 aa12.11□□□□□ -0.47
CDC42SE1-205ENST00000491825 YPEL1O60688 119 aa12.11□□□□□ -0.47
CDC42SE1-205ENST00000491825 TSPAN9O75954 239 aa12.11□□□□□ -0.47
CDC42SE1-205ENST00000491825 PRRX1P54821 245 aa12.11□□□□□ -0.47
CDC42SE1-205ENST00000491825 LGALS4P56470 323 aa12.11□□□□□ -0.47
CDC42SE1-205ENST00000491825 LTC4SQ16873 150 aa12.11□□□□□ -0.47
CDC42SE1-205ENST00000491825 FOXB2Q5VYV0 432 aa12.11□□□□□ -0.47
CDC42SE1-205ENST00000491825 LAX1Q8IWV1 398 aa12.11□□□□□ -0.47
CDC42SE1-205ENST00000491825 ZNF439Q8NDP4 499 aa12.11□□□□□ -0.47
CDC42SE1-205ENST00000491825 MALSU1Q96EH3 234 aa12.11□□□□□ -0.47
CDC42SE1-205ENST00000491825 YPEL2Q96QA6 119 aa12.11□□□□□ -0.47
CDC42SE1-205ENST00000491825 MIXL1Q9H2W2 232 aa12.11□□□□□ -0.47
CDC42SE1-205ENST00000491825 OR2S2Q9NQN1 319 aa12.11□□□□□ -0.47
CDC42SE1-205ENST00000491825 GNG12Q9UBI6 72 aa12.11□□□□□ -0.47
CDC42SE1-205ENST00000491825 FAM96BQ9Y3D0 163 aa12.11□□□□□ -0.47
CDC42SE1-205ENST00000491825 AMMECR1Q9Y4X0 333 aaPredicted RBP12.11□□□□□ -0.47
CDC42SE1-205ENST00000491825 RGS5O15539 181 aa12.1□□□□□ -0.47
CDC42SE1-205ENST00000491825 FABP7O15540 132 aa12.1□□□□□ -0.47
CDC42SE1-205ENST00000491825 RGS11O94810 467 aa12.1□□□□□ -0.47
CDC42SE1-205ENST00000491825 HLA-DQB1P01920 261 aa12.1□□□□□ -0.47
CDC42SE1-205ENST00000491825 SCTP09683 121 aa12.1□□□□□ -0.47
CDC42SE1-205ENST00000491825 HTR1DP28221 377 aa12.1□□□□□ -0.47
CDC42SE1-205ENST00000491825 CBX5P45973 191 aa12.1□□□□□ -0.47
CDC42SE1-205ENST00000491825 HERPUD1Q15011 391 aa12.1□□□□□ -0.47
CDC42SE1-205ENST00000491825 AANATQ16613 207 aa12.1□□□□□ -0.47
CDC42SE1-205ENST00000491825 LDLRAD2Q5SZI1 272 aa12.1□□□□□ -0.47
CDC42SE1-205ENST00000491825 SLC25A48Q6ZT89 311 aaKnown RBP12.1□□□□□ -0.47
CDC42SE1-205ENST00000491825 IZUMO1Q8IYV9 350 aa12.1□□□□□ -0.47
CDC42SE1-205ENST00000491825 MCFD2Q8NI22 146 aa12.1□□□□□ -0.47
CDC42SE1-205ENST00000491825 C15orf40Q8WUR7 153 aa12.1□□□□□ -0.47
CDC42SE1-205ENST00000491825 IL1F10Q8WWZ1 152 aa12.1□□□□□ -0.47
CDC42SE1-205ENST00000491825 LEAP2Q969E1 77 aa12.1□□□□□ -0.47
CDC42SE1-205ENST00000491825 OCSTAMPQ9BR26 566 aa12.1□□□□□ -0.47
CDC42SE1-205ENST00000491825 DCUN1D5Q9BTE7 237 aa12.1□□□□□ -0.47
CDC42SE1-205ENST00000491825 C6orf62Q9GZU0 229 aaPredicted RBP12.1□□□□□ -0.47
CDC42SE1-205ENST00000491825 MEGF9Q9H1U4 602 aa12.1□□□□□ -0.47
CDC42SE1-205ENST00000491825 EXTL2Q9UBQ6 330 aa12.1□□□□□ -0.47
CDC42SE1-205ENST00000491825 ZNF230Q9UIE0 474 aaPredicted RBP12.1□□□□□ -0.47
CDC42SE1-205ENST00000491825 ANAPC10Q9UM13 185 aa12.1□□□□□ -0.47
CDC42SE1-205ENST00000491825 IGHV3-43A0A0B4J1X8 118 aa12.09□□□□□ -0.47
CDC42SE1-205ENST00000491825 IGKV1-6A0A0C4DH72 117 aa12.09□□□□□ -0.47
CDC42SE1-205ENST00000491825 LEUTXA8MZ59 168 aa12.09□□□□□ -0.47
CDC42SE1-205ENST00000491825 FAM25AB3EWG3 89 aa12.09□□□□□ -0.47
CDC42SE1-205ENST00000491825 FAM25CB3EWG5 89 aa12.09□□□□□ -0.47
CDC42SE1-205ENST00000491825 FAM25GB3EWG6 89 aa12.09□□□□□ -0.47
CDC42SE1-205ENST00000491825 LY6LH3BQJ8 138 aa12.09□□□□□ -0.47
CDC42SE1-205ENST00000491825 BUB1B-PAK6H3BSN5 160 aa12.09□□□□□ -0.47
CDC42SE1-205ENST00000491825 CTDSP2O14595 271 aa12.09□□□□□ -0.47
CDC42SE1-205ENST00000491825 ITGB1BP1O14713 200 aa12.09□□□□□ -0.47
CDC42SE1-205ENST00000491825 TSPAN15O95858 294 aa12.09□□□□□ -0.47
CDC42SE1-205ENST00000491825 IGHV3-43DP0DP04 118 aa12.09□□□□□ -0.47
CDC42SE1-205ENST00000491825 ZBTB25P24278 435 aa12.09□□□□□ -0.47
CDC42SE1-205ENST00000491825 CEACAM3P40198 252 aa12.09□□□□□ -0.47
CDC42SE1-205ENST00000491825 ZNF137PP52743 207 aa12.09□□□□□ -0.47
CDC42SE1-205ENST00000491825 GNMTQ14749 295 aa12.09□□□□□ -0.47
CDC42SE1-205ENST00000491825 MORN2Q502X0 79 aa12.09□□□□□ -0.47
CDC42SE1-205ENST00000491825 DHRS7BQ6IAN0 325 aaPredicted RBP12.09□□□□□ -0.47
CDC42SE1-205ENST00000491825 LHFPL4Q7Z7J7 247 aa12.09□□□□□ -0.47
CDC42SE1-205ENST00000491825 C17orf50Q8WW18 174 aa12.09□□□□□ -0.47
CDC42SE1-205ENST00000491825 TOLLIPQ9H0E2 274 aa12.09□□□□□ -0.47
CDC42SE1-205ENST00000491825 SCPEP1Q9HB40 452 aa12.09□□□□□ -0.47
CDC42SE1-205ENST00000491825 DPM3Q9P2X0 92 aa12.09□□□□□ -0.47
CDC42SE1-205ENST00000491825 RABL2AQ9UBK7 228 aaPredicted RBP12.09□□□□□ -0.47
CDC42SE1-205ENST00000491825 RABL2BQ9UNT1 228 aa12.09□□□□□ -0.47
CDC42SE1-205ENST00000491825 TRBV6-7A0A0A0MS04 114 aa12.08□□□□□ -0.48
CDC42SE1-205ENST00000491825 A6NHS1 94 aa12.08□□□□□ -0.48
CDC42SE1-205ENST00000491825 VGLL3A8MV65 326 aa12.08□□□□□ -0.48
CDC42SE1-205ENST00000491825 OOSP1A8MZH6 123 aa12.08□□□□□ -0.48
CDC42SE1-205ENST00000491825 LPLP06858 475 aa12.08□□□□□ -0.48
CDC42SE1-205ENST00000491825 PRSS3P35030 304 aa12.08□□□□□ -0.48
CDC42SE1-205ENST00000491825 PPP1CCP36873 323 aaKnown RBP12.08□□□□□ -0.48
CDC42SE1-205ENST00000491825 GNG10P50151 68 aa12.08□□□□□ -0.48
CDC42SE1-205ENST00000491825 DYNLT3P51808 116 aa12.08□□□□□ -0.48
CDC42SE1-205ENST00000491825 MADCAM1Q13477 382 aa12.08□□□□□ -0.48
CDC42SE1-205ENST00000491825 FAM53AQ6NSI3 398 aaPredicted RBP12.08□□□□□ -0.48
CDC42SE1-205ENST00000491825 CNIH2Q6PI25 160 aa12.08□□□□□ -0.48
CDC42SE1-205ENST00000491825 C5orf24Q7Z6I8 188 aa12.08□□□□□ -0.48
CDC42SE1-205ENST00000491825 HOGA1Q86XE5 327 aa12.08□□□□□ -0.48
CDC42SE1-205ENST00000491825 OR52L2PQ8NGH6 319 aa12.08□□□□□ -0.48
CDC42SE1-205ENST00000491825 OR10V1Q8NGI7 309 aa12.08□□□□□ -0.48
CDC42SE1-205ENST00000491825 OR5R1Q8NH85 324 aa12.08□□□□□ -0.48
CDC42SE1-205ENST00000491825 MAFIPQ8WZ33 124 aa12.08□□□□□ -0.48
CDC42SE1-205ENST00000491825 ABHD14AQ9BUJ0 271 aa12.08□□□□□ -0.48
CDC42SE1-205ENST00000491825 SLC23A1Q9UHI7 598 aa12.08□□□□□ -0.48
CDC42SE1-205ENST00000491825 IGKV1D-8A0A087WSZ0 117 aa12.07□□□□□ -0.48
CDC42SE1-205ENST00000491825 BTBD17A6NE02 478 aa12.07□□□□□ -0.48
CDC42SE1-205ENST00000491825 SULT1C2O00338 296 aa12.07□□□□□ -0.48
CDC42SE1-205ENST00000491825 IGHV3-7P01780 117 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms