RNA–Protein interactions for RNA: ENST00000491629.5

USF1-206, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 933 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-206ENST00000491629 PITPNAQ00169 270 aa10.1□□□□□ -0.79
USF1-206ENST00000491629 MED21Q13503 144 aa10.1□□□□□ -0.79
USF1-206ENST00000491629 MORN2Q502X0 79 aa10.1□□□□□ -0.79
USF1-206ENST00000491629 LIN54Q6MZP7 749 aa10.1□□□□□ -0.79
USF1-206ENST00000491629 IL34Q6ZMJ4 242 aa10.1□□□□□ -0.79
USF1-206ENST00000491629 PRR18Q8N4B5 295 aa10.1□□□□□ -0.79
USF1-206ENST00000491629 TSEN15Q8WW01 171 aaKnown RBP10.1□□□□□ -0.79
USF1-206ENST00000491629 RHOVQ96L33 236 aa10.1□□□□□ -0.79
USF1-206ENST00000491629 OR4C12Q96R67 309 aa10.1□□□□□ -0.79
USF1-206ENST00000491629 ALG8Q9BVK2 526 aa10.1□□□□□ -0.79
USF1-206ENST00000491629 JAM3Q9BX67 310 aa10.1□□□□□ -0.79
USF1-206ENST00000491629 MRPS26Q9BYN8 205 aaKnown RBP10.1□□□□□ -0.79
USF1-206ENST00000491629 METTL9Q9H1A3 318 aa10.1□□□□□ -0.79
USF1-206ENST00000491629 RCC2Q9P258 522 aaKnown RBP10.1□□□□□ -0.79
USF1-206ENST00000491629 ENOPH1Q9UHY7 261 aa10.1□□□□□ -0.79
USF1-206ENST00000491629 FOXA2Q9Y261 457 aaPredicted RBP10.1□□□□□ -0.79
USF1-206ENST00000491629 MRPS28Q9Y2Q9 187 aaKnown RBP10.1□□□□□ -0.79
USF1-206ENST00000491629 HECTD4Q9Y4D8 3996 aa10.09□□□□□ -0.79
USF1-206ENST00000491629 SNRPGP62308 76 aaKnown RBP10.09□□□□□ -0.79
USF1-206ENST00000491629 CX3CL1P78423 397 aa10.09□□□□□ -0.79
USF1-206ENST00000491629 MPV17LQ2QL34 196 aa10.09□□□□□ -0.79
USF1-206ENST00000491629 STEAP3Q658P3 488 aa10.09□□□□□ -0.79
USF1-206ENST00000491629 XAF1Q6GPH4 301 aa10.09□□□□□ -0.79
USF1-206ENST00000491629 SYS1Q8N2H4 156 aa10.09□□□□□ -0.79
USF1-206ENST00000491629 OR52L2PQ8NGH6 319 aa10.09□□□□□ -0.79
USF1-206ENST00000491629 NEK7Q8TDX7 302 aa10.09□□□□□ -0.79
USF1-206ENST00000491629 MS4A10Q96PG2 267 aa10.09□□□□□ -0.79
USF1-206ENST00000491629 FAM110AQ9BQ89 295 aa10.09□□□□□ -0.79
USF1-206ENST00000491629 ZNF251Q9BRH9 671 aa10.09□□□□□ -0.79
USF1-206ENST00000491629 FBXL15Q9H469 300 aa10.09□□□□□ -0.79
USF1-206ENST00000491629 OAZ3Q9UMX2 235 aa10.09□□□□□ -0.79
USF1-206ENST00000491629 STUB1Q9UNE7 303 aa10.09□□□□□ -0.79
USF1-206ENST00000491629 A3GALT2U3KPV4 340 aa10.09□□□□□ -0.79
USF1-206ENST00000491629 GYG2O15488 501 aa10.08□□□□□ -0.8
USF1-206ENST00000491629 SPINT2O43291 252 aa10.08□□□□□ -0.8
USF1-206ENST00000491629 DENRO43583 198 aaKnown RBP10.08□□□□□ -0.8
USF1-206ENST00000491629 ARSBP15848 533 aa10.08□□□□□ -0.8
USF1-206ENST00000491629 GABRB1P18505 474 aa10.08□□□□□ -0.8
USF1-206ENST00000491629 FASP25445 335 aa10.08□□□□□ -0.8
USF1-206ENST00000491629 PPP1CCP36873 323 aaKnown RBP10.08□□□□□ -0.8
USF1-206ENST00000491629 IZUMO2Q6UXV1 221 aa10.08□□□□□ -0.8
USF1-206ENST00000491629 ZNF833PQ6ZTB9 187 aa10.08□□□□□ -0.8
USF1-206ENST00000491629 LINC00596Q86U02 117 aa10.08□□□□□ -0.8
USF1-206ENST00000491629 SGPP2Q8IWX5 399 aa10.08□□□□□ -0.8
USF1-206ENST00000491629 TRUB1Q8WWH5 349 aaKnown RBP10.08□□□□□ -0.8
USF1-206ENST00000491629 FAM103A1Q9BTL3 118 aaKnown RBP10.08□□□□□ -0.8
USF1-206ENST00000491629 ERVK13-1Q9NX77 482 aa10.08□□□□□ -0.8
USF1-206ENST00000491629 TRAPPC2LQ9UL33 140 aa10.08□□□□□ -0.8
USF1-206ENST00000491629 SAA2-SAA4A0A096LPE2 208 aa10.07□□□□□ -0.8
USF1-206ENST00000491629 IZUMO1RA6ND01 250 aa10.07□□□□□ -0.8
USF1-206ENST00000491629 MAGEB3O15480 346 aa10.07□□□□□ -0.8
USF1-206ENST00000491629 CIB2O75838 187 aa10.07□□□□□ -0.8
USF1-206ENST00000491629 SC5DO75845 299 aa10.07□□□□□ -0.8
USF1-206ENST00000491629 CSTBP04080 98 aaKnown RBP10.07□□□□□ -0.8
USF1-206ENST00000491629 SAA2P0DJI9 122 aaPredicted RBP10.07□□□□□ -0.8
USF1-206ENST00000491629 SMIM18P0DKX4 95 aa10.07□□□□□ -0.8
USF1-206ENST00000491629 ZNF93P35789 620 aaPredicted RBP10.07□□□□□ -0.8
USF1-206ENST00000491629 SPCS2Q15005 226 aa10.07□□□□□ -0.8
USF1-206ENST00000491629 DNAL1Q4LDG9 190 aa10.07□□□□□ -0.8
USF1-206ENST00000491629 SLC22A6Q4U2R8 563 aa10.07□□□□□ -0.8
USF1-206ENST00000491629 DDI2Q5TDH0 399 aa10.07□□□□□ -0.8
USF1-206ENST00000491629 ZNF660Q6AZW8 331 aaPredicted RBP10.07□□□□□ -0.8
USF1-206ENST00000491629 SIGIRRQ6IA17 410 aa10.07□□□□□ -0.8
USF1-206ENST00000491629 CD200R1LQ6Q8B3 271 aa10.07□□□□□ -0.8
USF1-206ENST00000491629 LINC00322Q6ZN03 302 aaPredicted RBP10.07□□□□□ -0.8
USF1-206ENST00000491629 CPNE2Q96FN4 548 aaPredicted RBP10.07□□□□□ -0.8
USF1-206ENST00000491629 ABHD14AQ9BUJ0 271 aa10.07□□□□□ -0.8
USF1-206ENST00000491629 RSRP1Q9BUV0 290 aa10.07□□□□□ -0.8
USF1-206ENST00000491629 HIPK2Q9H2X6 1198 aa10.07□□□□□ -0.8
USF1-206ENST00000491629 Q9H521 79 aa10.07□□□□□ -0.8
USF1-206ENST00000491629 TAF9BQ9HBM6 251 aa10.07□□□□□ -0.8
USF1-206ENST00000491629 OR2S2Q9NQN1 319 aa10.07□□□□□ -0.8
USF1-206ENST00000491629 MBNL3Q9NUK0 354 aaKnown RBP10.07□□□□□ -0.8
USF1-206ENST00000491629 ADAM30Q9UKF2 790 aa10.07□□□□□ -0.8
USF1-206ENST00000491629 AP4S1Q9Y587 144 aa10.07□□□□□ -0.8
USF1-206ENST00000491629 SAC3D1A6NKF1 404 aa10.06□□□□□ -0.8
USF1-206ENST00000491629 ZNF701M0R085 212 aaPredicted RBP10.06□□□□□ -0.8
USF1-206ENST00000491629 CASQ2O14958 399 aaPredicted RBP10.06□□□□□ -0.8
USF1-206ENST00000491629 RAB40BQ12829 278 aa10.06□□□□□ -0.8
USF1-206ENST00000491629 TMEM30BQ3MIR4 351 aa10.06□□□□□ -0.8
USF1-206ENST00000491629 C6orf183Q5T699 404 aa10.06□□□□□ -0.8
USF1-206ENST00000491629 FAM131AQ6UXB0 335 aa10.06□□□□□ -0.8
USF1-206ENST00000491629 ANKRD13BQ86YJ7 626 aa10.06□□□□□ -0.8
USF1-206ENST00000491629 TMEM106AQ96A25 262 aa10.06□□□□□ -0.8
USF1-206ENST00000491629 FLYWCH2Q96CP2 140 aaKnown RBP10.06□□□□□ -0.8
USF1-206ENST00000491629 ELOVL1Q9BW60 279 aa10.06□□□□□ -0.8
USF1-206ENST00000491629 CST11Q9H112 138 aa10.06□□□□□ -0.8
USF1-206ENST00000491629 IFI27L2Q9H2X8 130 aa10.06□□□□□ -0.8
USF1-206ENST00000491629 AMBNQ9NP70 447 aa10.06□□□□□ -0.8
USF1-206ENST00000491629 IMPAD1Q9NX62 359 aa10.06□□□□□ -0.8
USF1-206ENST00000491629 CNOT2Q9NZN8 540 aaKnown RBP10.06□□□□□ -0.8
USF1-206ENST00000491629 PCLOQ9Y6V0 5065 aa10.06□□□□□ -0.8
USF1-206ENST00000491629 RRHO14718 337 aa10.05□□□□□ -0.8
USF1-206ENST00000491629 RGS11O94810 467 aa10.05□□□□□ -0.8
USF1-206ENST00000491629 IFNA6P05013 189 aa10.05□□□□□ -0.8
USF1-206ENST00000491629 TFAP2AP05549 437 aa10.05□□□□□ -0.8
USF1-206ENST00000491629 LIMS3P0CW19 117 aa10.05□□□□□ -0.8
USF1-206ENST00000491629 LIMS4P0CW20 117 aa10.05□□□□□ -0.8
USF1-206ENST00000491629 CT45A6P0DMU7 189 aa10.05□□□□□ -0.8
USF1-206ENST00000491629 CT45A5P0DMU8 189 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 177.5 ms