RNA–Protein interactions for RNA: ENST00000491552.1

MSH5-SAPCD1-206, Transcript of MSH5-SAPCD1 readthrough (NMD candidate), humanhuman

TSL 3

Gene MSH5-SAPCD1, Length 706 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-SAPCD1-206ENST00000491552 REG1BP48304 166 aa13.06□□□□□ -0.32
MSH5-SAPCD1-206ENST00000491552 ZNF137PP52743 207 aa13.06□□□□□ -0.32
MSH5-SAPCD1-206ENST00000491552 ZNF260Q3ZCT1 412 aa13.06□□□□□ -0.32
MSH5-SAPCD1-206ENST00000491552 OR2AK2Q8NG84 335 aa13.06□□□□□ -0.32
MSH5-SAPCD1-206ENST00000491552 OR4C13Q8NGP0 309 aa13.06□□□□□ -0.32
MSH5-SAPCD1-206ENST00000491552 OR56B4Q8NH76 319 aa13.06□□□□□ -0.32
MSH5-SAPCD1-206ENST00000491552 LINC01006Q8NI28 216 aa13.06□□□□□ -0.32
MSH5-SAPCD1-206ENST00000491552 CAPSLQ8WWF8 208 aa13.06□□□□□ -0.32
MSH5-SAPCD1-206ENST00000491552 RTN4IP1Q8WWV3 396 aaPredicted RBP13.06□□□□□ -0.32
MSH5-SAPCD1-206ENST00000491552 CFHR4Q92496 578 aa13.06□□□□□ -0.32
MSH5-SAPCD1-206ENST00000491552 ST6GALNAC6Q969X2 333 aa13.06□□□□□ -0.32
MSH5-SAPCD1-206ENST00000491552 SLC23A1Q9UHI7 598 aa13.06□□□□□ -0.32
MSH5-SAPCD1-206ENST00000491552 ELF5Q9UKW6 265 aaPredicted RBP13.06□□□□□ -0.32
MSH5-SAPCD1-206ENST00000491552 A0A0A6YYH2 397 aa13.05□□□□□ -0.32
MSH5-SAPCD1-206ENST00000491552 IGHV1-3A0A0C4DH29 117 aa13.05□□□□□ -0.32
MSH5-SAPCD1-206ENST00000491552 TMEM235A6NFC5 223 aa13.05□□□□□ -0.32
MSH5-SAPCD1-206ENST00000491552 A6NJ64 397 aa13.05□□□□□ -0.32
MSH5-SAPCD1-206ENST00000491552 FAM90A9PA6NNJ1 464 aa13.05□□□□□ -0.32
MSH5-SAPCD1-206ENST00000491552 HSPA12AO43301 675 aa13.05□□□□□ -0.32
MSH5-SAPCD1-206ENST00000491552 TXNL1O43396 289 aa13.05□□□□□ -0.32
MSH5-SAPCD1-206ENST00000491552 FAM106CPP0CH98 169 aa13.05□□□□□ -0.32
MSH5-SAPCD1-206ENST00000491552 DTYMKP23919 212 aa13.05□□□□□ -0.32
MSH5-SAPCD1-206ENST00000491552 KIR2DS4P43632 304 aa13.05□□□□□ -0.32
MSH5-SAPCD1-206ENST00000491552 KIR2DS1Q14954 304 aa13.05□□□□□ -0.32
MSH5-SAPCD1-206ENST00000491552 CTF1Q16619 201 aa13.05□□□□□ -0.32
MSH5-SAPCD1-206ENST00000491552 HACD4Q5VWC8 232 aa13.05□□□□□ -0.32
MSH5-SAPCD1-206ENST00000491552 C16orf82Q7Z2V1 217 aa13.05□□□□□ -0.32
MSH5-SAPCD1-206ENST00000491552 LYG1Q8N1E2 194 aa13.05□□□□□ -0.32
MSH5-SAPCD1-206ENST00000491552 DRAM1Q8N682 238 aa13.05□□□□□ -0.32
MSH5-SAPCD1-206ENST00000491552 OR4A4PQ8NGN8 299 aa13.05□□□□□ -0.32
MSH5-SAPCD1-206ENST00000491552 KCTD12Q96CX2 325 aaKnown RBP13.05□□□□□ -0.32
MSH5-SAPCD1-206ENST00000491552 OR1A1Q9P1Q5 309 aa13.05□□□□□ -0.32
MSH5-SAPCD1-206ENST00000491552 FABP7O15540 132 aa13.04□□□□□ -0.32
MSH5-SAPCD1-206ENST00000491552 SNRNP70P08621 437 aaKnown RBP13.04□□□□□ -0.32
MSH5-SAPCD1-206ENST00000491552 ZBTB25P24278 435 aa13.04□□□□□ -0.32
MSH5-SAPCD1-206ENST00000491552 GNG2P59768 71 aa13.04□□□□□ -0.32
MSH5-SAPCD1-206ENST00000491552 PITPNAQ00169 270 aa13.04□□□□□ -0.32
MSH5-SAPCD1-206ENST00000491552 SRSF7Q16629 238 aaKnown RBP eCLIP13.04□□□□□ -0.322e-7■■■■□ 24.5
MSH5-SAPCD1-206ENST00000491552 PNLIPRP3Q17RR3 467 aa13.04□□□□□ -0.32
MSH5-SAPCD1-206ENST00000491552 FBLN7Q53RD9 439 aa13.04□□□□□ -0.32
MSH5-SAPCD1-206ENST00000491552 UBE2NLQ5JXB2 153 aa13.04□□□□□ -0.32
MSH5-SAPCD1-206ENST00000491552 MOB3BQ86TA1 216 aa13.04□□□□□ -0.32
MSH5-SAPCD1-206ENST00000491552 THNSL2Q86YJ6 484 aa13.04□□□□□ -0.32
MSH5-SAPCD1-206ENST00000491552 TGIF2LXQ8IUE1 241 aa13.04□□□□□ -0.32
MSH5-SAPCD1-206ENST00000491552 MAFIPQ8WZ33 124 aa13.04□□□□□ -0.32
MSH5-SAPCD1-206ENST00000491552 AKR1E2Q96JD6 320 aa13.04□□□□□ -0.32
MSH5-SAPCD1-206ENST00000491552 SLC25A33Q9BSK2 321 aa13.04□□□□□ -0.32
MSH5-SAPCD1-206ENST00000491552 ZNF747Q9BV97 191 aa13.04□□□□□ -0.32
MSH5-SAPCD1-206ENST00000491552 ABCG5Q9H222 651 aa13.04□□□□□ -0.32
MSH5-SAPCD1-206ENST00000491552 DIABLOQ9NR28 239 aa13.04□□□□□ -0.32
MSH5-SAPCD1-206ENST00000491552 ZNF230Q9UIE0 474 aaPredicted RBP13.04□□□□□ -0.32
MSH5-SAPCD1-206ENST00000491552 RNF114Q9Y508 228 aa13.04□□□□□ -0.32
MSH5-SAPCD1-206ENST00000491552 DNHD1Q96M86 4753 aa13.03□□□□□ -0.32
MSH5-SAPCD1-206ENST00000491552 TRAV18A0A075B6X5 111 aa13.03□□□□□ -0.32
MSH5-SAPCD1-206ENST00000491552 IGKV1-6A0A0C4DH72 117 aa13.03□□□□□ -0.32
MSH5-SAPCD1-206ENST00000491552 LANCL1O43813 399 aa13.03□□□□□ -0.32
MSH5-SAPCD1-206ENST00000491552 OR2F2O95006 317 aa13.03□□□□□ -0.32
MSH5-SAPCD1-206ENST00000491552 CEACAM6P40199 344 aa13.03□□□□□ -0.32
MSH5-SAPCD1-206ENST00000491552 HES1Q14469 280 aa13.03□□□□□ -0.32
MSH5-SAPCD1-206ENST00000491552 HABP2Q14520 560 aaPredicted RBP13.03□□□□□ -0.32
MSH5-SAPCD1-206ENST00000491552 HERPUD1Q15011 391 aa13.03□□□□□ -0.32
MSH5-SAPCD1-206ENST00000491552 Q6ZS49 121 aa13.03□□□□□ -0.32
MSH5-SAPCD1-206ENST00000491552 ODF3L1Q8IXM7 274 aa13.03□□□□□ -0.32
MSH5-SAPCD1-206ENST00000491552 SAMD12Q8N8I0 201 aa13.03□□□□□ -0.32
MSH5-SAPCD1-206ENST00000491552 DTX3Q8N9I9 347 aa13.03□□□□□ -0.32
MSH5-SAPCD1-206ENST00000491552 NUDCD2Q8WVJ2 157 aa13.03□□□□□ -0.32
MSH5-SAPCD1-206ENST00000491552 WFDC12Q8WWY7 111 aa13.03□□□□□ -0.32
MSH5-SAPCD1-206ENST00000491552 EDARADDQ8WWZ3 215 aa13.03□□□□□ -0.32
MSH5-SAPCD1-206ENST00000491552 RBM14Q96PK6 669 aaKnown RBP13.03□□□□□ -0.32
MSH5-SAPCD1-206ENST00000491552 CABLES2Q9BTV7 478 aa13.03□□□□□ -0.32
MSH5-SAPCD1-206ENST00000491552 PARP12Q9H0J9 701 aaKnown RBP13.03□□□□□ -0.32
MSH5-SAPCD1-206ENST00000491552 DCSTAMPQ9H295 470 aa13.03□□□□□ -0.32
MSH5-SAPCD1-206ENST00000491552 IFI27L2Q9H2X8 130 aa13.03□□□□□ -0.32
MSH5-SAPCD1-206ENST00000491552 SAA2-SAA4A0A096LPE2 208 aa13.02□□□□□ -0.33
MSH5-SAPCD1-206ENST00000491552 IGHV3-72A0A0B4J1Y9 119 aa13.02□□□□□ -0.33
MSH5-SAPCD1-206ENST00000491552 ITGB1BP1O14713 200 aa13.02□□□□□ -0.33
MSH5-SAPCD1-206ENST00000491552 ST8SIA5O15466 376 aa13.02□□□□□ -0.33
MSH5-SAPCD1-206ENST00000491552 DIRAS3O95661 229 aa13.02□□□□□ -0.33
MSH5-SAPCD1-206ENST00000491552 IGKV1D-33P01593 117 aa13.02□□□□□ -0.33
MSH5-SAPCD1-206ENST00000491552 IGKV1-33P01594 117 aa13.02□□□□□ -0.33
MSH5-SAPCD1-206ENST00000491552 GSTT2P0CG29 244 aa13.02□□□□□ -0.33
MSH5-SAPCD1-206ENST00000491552 GSTT2BP0CG30 244 aa13.02□□□□□ -0.33
MSH5-SAPCD1-206ENST00000491552 SAA2P0DJI9 122 aaPredicted RBP13.02□□□□□ -0.33
MSH5-SAPCD1-206ENST00000491552 TMEM11P17152 192 aa13.02□□□□□ -0.33
MSH5-SAPCD1-206ENST00000491552 RPL5P46777 297 aaKnown RBP13.02□□□□□ -0.33
MSH5-SAPCD1-206ENST00000491552 RORCP51449 518 aa13.02□□□□□ -0.33
MSH5-SAPCD1-206ENST00000491552 PROK1P58294 105 aa13.02□□□□□ -0.33
MSH5-SAPCD1-206ENST00000491552 CLVS1Q8IUQ0 354 aaPredicted RBP13.02□□□□□ -0.33
MSH5-SAPCD1-206ENST00000491552 IZUMO1Q8IYV9 350 aa13.02□□□□□ -0.33
MSH5-SAPCD1-206ENST00000491552 OR2T6Q8NHC8 308 aa13.02□□□□□ -0.33
MSH5-SAPCD1-206ENST00000491552 ZNF702PQ9H963 129 aa13.02□□□□□ -0.33
MSH5-SAPCD1-206ENST00000491552 HAX1O00165 279 aa13.01□□□□□ -0.33
MSH5-SAPCD1-206ENST00000491552 BET1O15155 118 aa13.01□□□□□ -0.33
MSH5-SAPCD1-206ENST00000491552 CD1BP29016 333 aa13.01□□□□□ -0.33
MSH5-SAPCD1-206ENST00000491552 IGSF11Q5DX21 431 aa13.01□□□□□ -0.33
MSH5-SAPCD1-206ENST00000491552 FAM71F2Q6NXP2 309 aa13.01□□□□□ -0.33
MSH5-SAPCD1-206ENST00000491552 SHISA2Q6UWI4 295 aa13.01□□□□□ -0.33
MSH5-SAPCD1-206ENST00000491552 ZNF833PQ6ZTB9 187 aa13.01□□□□□ -0.33
MSH5-SAPCD1-206ENST00000491552 Q8N2B8 174 aa13.01□□□□□ -0.33
MSH5-SAPCD1-206ENST00000491552 ACOT12Q8WYK0 555 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms