RNA–Protein interactions for RNA: ENST00000490839.1

AGAP3-222, Transcript of ArfGAP with GTPase domain, ankyrin repeat and PH domain 3, human

TSL 4

Gene AGAP3, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
AGAP3-222	ENST00000490839	ANKRD13B	Q86YJ7	626 aa		11.71	□□□□□ -0.53
AGAP3-222	ENST00000490839	ODF3L1	Q8IXM7	274 aa		11.71	□□□□□ -0.53
AGAP3-222	ENST00000490839	CASTOR1	Q8WTX7	329 aa		11.71	□□□□□ -0.53
AGAP3-222	ENST00000490839	RSRP1	Q9BUV0	290 aa		11.71	□□□□□ -0.53
AGAP3-222	ENST00000490839	TAF9B	Q9HBM6	251 aa		11.71	□□□□□ -0.53
AGAP3-222	ENST00000490839	JPT1	Q9UK76	154 aa		11.71	□□□□□ -0.53
AGAP3-222	ENST00000490839	IGHV3-11	P01762	117 aa		11.7	□□□□□ -0.54
AGAP3-222	ENST00000490839	ARSB	P15848	533 aa		11.7	□□□□□ -0.54
AGAP3-222	ENST00000490839	RCC1	P18754	421 aa	Predicted RBP	11.7	□□□□□ -0.54
AGAP3-222	ENST00000490839	CX3CL1	P78423	397 aa		11.7	□□□□□ -0.54
AGAP3-222	ENST00000490839	ADARB1	P78563	741 aa	Known RBP	11.7	□□□□□ -0.54
AGAP3-222	ENST00000490839	TMEM267	Q0VDI3	215 aa	Predicted RBP	11.7	□□□□□ -0.54
AGAP3-222	ENST00000490839	GNMT	Q14749	295 aa		11.7	□□□□□ -0.54
AGAP3-222	ENST00000490839	HAGH	Q16775	308 aa		11.7	□□□□□ -0.54
AGAP3-222	ENST00000490839	CD200R1L	Q6Q8B3	271 aa		11.7	□□□□□ -0.54
AGAP3-222	ENST00000490839	IL17D	Q8TAD2	202 aa		11.7	□□□□□ -0.54
AGAP3-222	ENST00000490839	MRPS24	Q96EL2	167 aa	Known RBP	11.7	□□□□□ -0.54
AGAP3-222	ENST00000490839	RNF150	Q9ULK6	438 aa		11.7	□□□□□ -0.54
AGAP3-222	ENST00000490839	ORC6	Q9Y5N6	252 aa		11.7	□□□□□ -0.54
AGAP3-222	ENST00000490839	NUBP2	Q9Y5Y2	271 aa		11.7	□□□□□ -0.54
AGAP3-222	ENST00000490839	A3GALT2	U3KPV4	340 aa		11.7	□□□□□ -0.54
AGAP3-222	ENST00000490839	ALMS1	Q8TCU4	4167 aa		11.69	□□□□□ -0.54
AGAP3-222	ENST00000490839	SAA2-SAA4	A0A096LPE2	208 aa		11.69	□□□□□ -0.54
AGAP3-222	ENST00000490839	SC5D	O75845	299 aa		11.69	□□□□□ -0.54
AGAP3-222	ENST00000490839	ALPL	P05186	524 aa		11.69	□□□□□ -0.54
AGAP3-222	ENST00000490839	SAA2	P0DJI9	122 aa	Predicted RBP	11.69	□□□□□ -0.54
AGAP3-222	ENST00000490839	GABRB1	P18505	474 aa		11.69	□□□□□ -0.54
AGAP3-222	ENST00000490839	PPP1CC	P36873	323 aa	Known RBP	11.69	□□□□□ -0.54
AGAP3-222	ENST00000490839	GTF2A1	P52655	376 aa	Predicted RBP	11.69	□□□□□ -0.54
AGAP3-222	ENST00000490839	TPPP2	P59282	170 aa		11.69	□□□□□ -0.54
AGAP3-222	ENST00000490839	RAB40B	Q12829	278 aa		11.69	□□□□□ -0.54
AGAP3-222	ENST00000490839	RIPK1	Q13546	671 aa		11.69	□□□□□ -0.54
AGAP3-222	ENST00000490839	ACTBL2	Q562R1	376 aa		11.69	□□□□□ -0.54
AGAP3-222	ENST00000490839	OR52L2P	Q8NGH6	319 aa		11.69	□□□□□ -0.54
AGAP3-222	ENST00000490839	ABHD5	Q8WTS1	349 aa		11.69	□□□□□ -0.54
AGAP3-222	ENST00000490839	RHOV	Q96L33	236 aa		11.69	□□□□□ -0.54
AGAP3-222	ENST00000490839	ZNF184	Q99676	751 aa	Predicted RBP	11.69	□□□□□ -0.54
AGAP3-222	ENST00000490839	FBXL15	Q9H469	300 aa		11.69	□□□□□ -0.54
AGAP3-222	ENST00000490839	SLA2	Q9H6Q3	261 aa		11.69	□□□□□ -0.54
AGAP3-222	ENST00000490839	MBNL3	Q9NUK0	354 aa	Known RBP	11.69	□□□□□ -0.54
AGAP3-222	ENST00000490839	KCNIP1	Q9NZI2	227 aa		11.69	□□□□□ -0.54
AGAP3-222	ENST00000490839	AASS	Q9UDR5	926 aa		11.69	□□□□□ -0.54
AGAP3-222	ENST00000490839	RRH	O14718	337 aa		11.68	□□□□□ -0.54
AGAP3-222	ENST00000490839	RGS11	O94810	467 aa		11.68	□□□□□ -0.54
AGAP3-222	ENST00000490839	GLA	P06280	429 aa		11.68	□□□□□ -0.54
AGAP3-222	ENST00000490839	EGR2	P11161	476 aa	Predicted RBP	11.68	□□□□□ -0.54
AGAP3-222	ENST00000490839	CD40LG	P29965	261 aa		11.68	□□□□□ -0.54
AGAP3-222	ENST00000490839	OR3A3	P47888	321 aa		11.68	□□□□□ -0.54
AGAP3-222	ENST00000490839	HTD2	P86397	168 aa		11.68	□□□□□ -0.54
AGAP3-222	ENST00000490839	PLGLA	Q15195	96 aa		11.68	□□□□□ -0.54
AGAP3-222	ENST00000490839	CCDC58	Q4VC31	144 aa		11.68	□□□□□ -0.54
AGAP3-222	ENST00000490839	AKIRIN2	Q53H80	203 aa		11.68	□□□□□ -0.54
AGAP3-222	ENST00000490839	LY6G6F	Q5SQ64	297 aa		11.68	□□□□□ -0.54
AGAP3-222	ENST00000490839	C1orf146	Q5VVC0	180 aa		11.68	□□□□□ -0.54
AGAP3-222	ENST00000490839	FAM71F2	Q6NXP2	309 aa		11.68	□□□□□ -0.54
AGAP3-222	ENST00000490839	RPL22L1	Q6P5R6	122 aa	Known RBP	11.68	□□□□□ -0.54
AGAP3-222	ENST00000490839	FAM131A	Q6UXB0	335 aa		11.68	□□□□□ -0.54
AGAP3-222	ENST00000490839	PEX16	Q9Y5Y5	336 aa		11.68	□□□□□ -0.54
AGAP3-222	ENST00000490839	FAM90A7P	A6NKC0	464 aa		11.67	□□□□□ -0.54
AGAP3-222	ENST00000490839	FAM90A23P	A8MXZ1	464 aa		11.67	□□□□□ -0.54
AGAP3-222	ENST00000490839		H0Y980	276 aa		11.67	□□□□□ -0.54
AGAP3-222	ENST00000490839	EI24	O14681	340 aa		11.67	□□□□□ -0.54
AGAP3-222	ENST00000490839	YPEL1	O60688	119 aa		11.67	□□□□□ -0.54
AGAP3-222	ENST00000490839	IGFBP3	P17936	291 aa	Predicted RBP	11.67	□□□□□ -0.54
AGAP3-222	ENST00000490839	ZP3	P21754	424 aa		11.67	□□□□□ -0.54
AGAP3-222	ENST00000490839	UNQ5815/PRO19632	Q6UWF5	114 aa		11.67	□□□□□ -0.54
AGAP3-222	ENST00000490839	PPP1R27	Q86WC6	154 aa		11.67	□□□□□ -0.54
AGAP3-222	ENST00000490839	OR2AK2	Q8NG84	335 aa		11.67	□□□□□ -0.54
AGAP3-222	ENST00000490839	OR52I1	Q8NGK6	324 aa		11.67	□□□□□ -0.54
AGAP3-222	ENST00000490839		Q96MT0	163 aa		11.67	□□□□□ -0.54
AGAP3-222	ENST00000490839	MS4A10	Q96PG2	267 aa		11.67	□□□□□ -0.54
AGAP3-222	ENST00000490839	YPEL2	Q96QA6	119 aa		11.67	□□□□□ -0.54
AGAP3-222	ENST00000490839	CNOT2	Q9NZN8	540 aa	Known RBP	11.67	□□□□□ -0.54
AGAP3-222	ENST00000490839	OR5H14	A6NHG9	310 aa		11.66	□□□□□ -0.54
AGAP3-222	ENST00000490839	RBBP9	O75884	186 aa		11.66	□□□□□ -0.54
AGAP3-222	ENST00000490839	MAS1	P04201	325 aa		11.66	□□□□□ -0.54
AGAP3-222	ENST00000490839	LIMS3	P0CW19	117 aa		11.66	□□□□□ -0.54
AGAP3-222	ENST00000490839	LIMS4	P0CW20	117 aa		11.66	□□□□□ -0.54
AGAP3-222	ENST00000490839	ZIK1	Q3SY52	487 aa	Predicted RBP	11.66	□□□□□ -0.54
AGAP3-222	ENST00000490839	XAF1	Q6GPH4	301 aa		11.66	□□□□□ -0.54
AGAP3-222	ENST00000490839	GLIPR1L1	Q6UWM5	242 aa		11.66	□□□□□ -0.54
AGAP3-222	ENST00000490839	GTSCR1	Q86UQ5	136 aa		11.66	□□□□□ -0.54
AGAP3-222	ENST00000490839	MUL1	Q969V5	352 aa		11.66	□□□□□ -0.54
AGAP3-222	ENST00000490839	ORAI1	Q96D31	301 aa		11.66	□□□□□ -0.54
AGAP3-222	ENST00000490839	IFI27L2	Q9H2X8	130 aa		11.66	□□□□□ -0.54
AGAP3-222	ENST00000490839	TUBA4B	Q9H853	241 aa		11.66	□□□□□ -0.54
AGAP3-222	ENST00000490839	RANGRF	Q9HD47	186 aa	Predicted RBP	11.66	□□□□□ -0.54
AGAP3-222	ENST00000490839	AMBN	Q9NP70	447 aa		11.66	□□□□□ -0.54
AGAP3-222	ENST00000490839	CKLF	Q9UBR5	152 aa		11.66	□□□□□ -0.54
AGAP3-222	ENST00000490839	FCN1	O00602	326 aa		11.65	□□□□□ -0.54
AGAP3-222	ENST00000490839	GPX5	O75715	221 aa		11.65	□□□□□ -0.54
AGAP3-222	ENST00000490839	TRGV3	P03979	118 aa		11.65	□□□□□ -0.54
AGAP3-222	ENST00000490839	TFAP2A	P05549	437 aa		11.65	□□□□□ -0.54
AGAP3-222	ENST00000490839	FUT3	P21217	361 aa		11.65	□□□□□ -0.54
AGAP3-222	ENST00000490839	ALDH3A2	P51648	485 aa		11.65	□□□□□ -0.54
AGAP3-222	ENST00000490839	LFNG	Q8NES3	379 aa		11.65	□□□□□ -0.54
AGAP3-222	ENST00000490839	MRPL30	Q8TCC3	161 aa	Known RBP	11.65	□□□□□ -0.54
AGAP3-222	ENST00000490839	GALM	Q96C23	342 aa		11.65	□□□□□ -0.54
AGAP3-222	ENST00000490839	SMIM19	Q96E16	107 aa		11.65	□□□□□ -0.54
AGAP3-222	ENST00000490839	RDH12	Q96NR8	316 aa		11.65	□□□□□ -0.54

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