RNA–Protein interactions for RNA: ENST00000490833.5

FN1-223, Transcript of fibronectin 1, human

TSL 3

Gene FN1, Length 699 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FN1-223	ENST00000490833	PLA2G5	P39877	138 aa		5.36	□□□□□ -1.55
FN1-223	ENST00000490833	RFC3	P40938	356 aa		5.36	□□□□□ -1.55
FN1-223	ENST00000490833	KIR2DL2	P43627	348 aa	Predicted RBP	5.36	□□□□□ -1.55
FN1-223	ENST00000490833	ZNF154	Q13106	437 aa		5.36	□□□□□ -1.55
FN1-223	ENST00000490833	RAB31	Q13636	194 aa		5.36	□□□□□ -1.55
FN1-223	ENST00000490833	CLINT1	Q14677	625 aa		5.36	□□□□□ -1.55
FN1-223	ENST00000490833	TGIF1	Q15583	401 aa		5.36	□□□□□ -1.55
FN1-223	ENST00000490833		Q3ZCU0	254 aa		5.36	□□□□□ -1.55
FN1-223	ENST00000490833	ACP7	Q6ZNF0	438 aa		5.36	□□□□□ -1.55
FN1-223	ENST00000490833	SLC35E3	Q7Z769	313 aa		5.36	□□□□□ -1.55
FN1-223	ENST00000490833	CENPV	Q7Z7K6	275 aa	Predicted RBP	5.36	□□□□□ -1.55
FN1-223	ENST00000490833	FGFRL1	Q8N441	504 aa		5.36	□□□□□ -1.55
FN1-223	ENST00000490833	SREK1IP1	Q8N9Q2	155 aa	Predicted RBP	5.36	□□□□□ -1.55
FN1-223	ENST00000490833	FDCSP	Q8NFU4	85 aa		5.36	□□□□□ -1.55
FN1-223	ENST00000490833	OR10P1	Q8NGE3	313 aa		5.36	□□□□□ -1.55
FN1-223	ENST00000490833	OR52M1	Q8NGK5	317 aa		5.36	□□□□□ -1.55
FN1-223	ENST00000490833	OR5C1	Q8NGR4	320 aa		5.36	□□□□□ -1.55
FN1-223	ENST00000490833	OR11L1	Q8NGX0	322 aa		5.36	□□□□□ -1.55
FN1-223	ENST00000490833	OR52E5	Q8NH55	327 aa		5.36	□□□□□ -1.55
FN1-223	ENST00000490833	PCNP	Q8WW12	178 aa	Known RBP	5.36	□□□□□ -1.55
FN1-223	ENST00000490833	IL1F10	Q8WWZ1	152 aa		5.36	□□□□□ -1.55
FN1-223	ENST00000490833	FAM122A	Q96E09	287 aa		5.36	□□□□□ -1.55
FN1-223	ENST00000490833	NIPSNAP3B	Q9BS92	247 aa		5.36	□□□□□ -1.55
FN1-223	ENST00000490833	HES7	Q9BYE0	225 aa		5.36	□□□□□ -1.55
FN1-223	ENST00000490833	MRPL37	Q9BZE1	423 aa	Known RBP	5.36	□□□□□ -1.55
FN1-223	ENST00000490833	LIME1	Q9H400	295 aa		5.36	□□□□□ -1.55
FN1-223	ENST00000490833	C11orf1	Q9H5F2	150 aa		5.36	□□□□□ -1.55
FN1-223	ENST00000490833	CCL28	Q9NRJ3	127 aa		5.36	□□□□□ -1.55
FN1-223	ENST00000490833	PSENEN	Q9NZ42	101 aa		5.36	□□□□□ -1.55
FN1-223	ENST00000490833	OR14J1	Q9UGF5	321 aa		5.36	□□□□□ -1.55
FN1-223	ENST00000490833	RNF115	Q9Y4L5	304 aa		5.36	□□□□□ -1.55
FN1-223	ENST00000490833	SDK2	Q58EX2	2172 aa		5.36	□□□□□ -1.55
FN1-223	ENST00000490833		A6NLC8	198 aa		5.35	□□□□□ -1.55
FN1-223	ENST00000490833	LRRC30	A6NM36	301 aa		5.35	□□□□□ -1.55
FN1-223	ENST00000490833	PROB1	E7EW31	1015 aa		5.35	□□□□□ -1.55
FN1-223	ENST00000490833		K7N7A8	449 aa		5.35	□□□□□ -1.55
FN1-223	ENST00000490833	MASP2	O00187	686 aa		5.35	□□□□□ -1.55
FN1-223	ENST00000490833	CYB5B	O43169	146 aa		5.35	□□□□□ -1.55
FN1-223	ENST00000490833	SSSCA1	O60232	199 aa		5.35	□□□□□ -1.55
FN1-223	ENST00000490833	YPEL1	O60688	119 aa		5.35	□□□□□ -1.55
FN1-223	ENST00000490833	HPRT1	P00492	218 aa		5.35	□□□□□ -1.55
FN1-223	ENST00000490833	IFNA17	P01571	189 aa		5.35	□□□□□ -1.55
FN1-223	ENST00000490833	S100A8	P05109	93 aa		5.35	□□□□□ -1.55
FN1-223	ENST00000490833	S100A6	P06703	90 aa		5.35	□□□□□ -1.55
FN1-223	ENST00000490833	GRP	P07492	148 aa		5.35	□□□□□ -1.55
FN1-223	ENST00000490833	CCL2	P13500	99 aa		5.35	□□□□□ -1.55
FN1-223	ENST00000490833	IRF2	P14316	349 aa		5.35	□□□□□ -1.55
FN1-223	ENST00000490833	MUC1	P15941	1255 aa	Predicted RBP	5.35	□□□□□ -1.55
FN1-223	ENST00000490833	TNFRSF1A	P19438	455 aa		5.35	□□□□□ -1.55
FN1-223	ENST00000490833	LPAR6	P43657	344 aa		5.35	□□□□□ -1.55
FN1-223	ENST00000490833	HOXA1	P49639	335 aa	Predicted RBP	5.35	□□□□□ -1.55
FN1-223	ENST00000490833	KLF3	P57682	345 aa	Predicted RBP	5.35	□□□□□ -1.55
FN1-223	ENST00000490833	UBE2K	P61086	200 aa		5.35	□□□□□ -1.55
FN1-223	ENST00000490833	ERVK-16	P61578	105 aa		5.35	□□□□□ -1.55
FN1-223	ENST00000490833	POLR2G	P62487	172 aa	Known RBP eCLIP	5.35	□□□□□ -1.55
FN1-223	ENST00000490833	RAB11A	P62491	216 aa		5.35	□□□□□ -1.55
FN1-223	ENST00000490833	GNB2	P62879	340 aa		5.35	□□□□□ -1.55
FN1-223	ENST00000490833	NHLH2	Q02577	135 aa		5.35	□□□□□ -1.55
FN1-223	ENST00000490833	RBPJ	Q06330	500 aa		5.35	□□□□□ -1.55
FN1-223	ENST00000490833	HERPUD1	Q15011	391 aa		5.35	□□□□□ -1.55
FN1-223	ENST00000490833	MST1L	Q2TV78	715 aa		5.35	□□□□□ -1.55
FN1-223	ENST00000490833	TMEM249	Q2WGJ8	235 aa		5.35	□□□□□ -1.55
FN1-223	ENST00000490833	DMRTC1	Q5HYR2	192 aa		5.35	□□□□□ -1.55
FN1-223	ENST00000490833	KRBOX4	Q5JUW0	171 aa		5.35	□□□□□ -1.55
FN1-223	ENST00000490833		Q6ZS92	163 aa		5.35	□□□□□ -1.55
FN1-223	ENST00000490833	ASCL5	Q7RTU5	278 aa		5.35	□□□□□ -1.55
FN1-223	ENST00000490833	H2BFWT	Q7Z2G1	175 aa		5.35	□□□□□ -1.55
FN1-223	ENST00000490833	MRGPRG	Q86SM5	289 aa		5.35	□□□□□ -1.55
FN1-223	ENST00000490833	C1orf87	Q8N0U7	546 aa		5.35	□□□□□ -1.55
FN1-223	ENST00000490833	LILRB2	Q8N423	598 aa		5.35	□□□□□ -1.55
FN1-223	ENST00000490833	NAXE	Q8NCW5	288 aa		5.35	□□□□□ -1.55
FN1-223	ENST00000490833	NANP	Q8TBE9	248 aa		5.35	□□□□□ -1.55
FN1-223	ENST00000490833	MBD3L1	Q8WWY6	194 aa		5.35	□□□□□ -1.55
FN1-223	ENST00000490833	MEGF10	Q96KG7	1140 aa		5.35	□□□□□ -1.55
FN1-223	ENST00000490833	YPEL2	Q96QA6	119 aa		5.35	□□□□□ -1.55
FN1-223	ENST00000490833	TMEM204	Q9BSN7	226 aa		5.35	□□□□□ -1.55
FN1-223	ENST00000490833	SSBP4	Q9BWG4	385 aa	Predicted RBP	5.35	□□□□□ -1.55
FN1-223	ENST00000490833	EGLN1	Q9GZT9	426 aa		5.35	□□□□□ -1.55
FN1-223	ENST00000490833	CTDSP1	Q9GZU7	261 aa		5.35	□□□□□ -1.55
FN1-223	ENST00000490833	MAGT1	Q9H0U3	335 aa		5.35	□□□□□ -1.55
FN1-223	ENST00000490833	FKBP11	Q9NYL4	201 aa		5.35	□□□□□ -1.55
FN1-223	ENST00000490833	HSPB7	Q9UBY9	170 aa		5.35	□□□□□ -1.55
FN1-223	ENST00000490833	IL19	Q9UHD0	177 aa		5.35	□□□□□ -1.55
FN1-223	ENST00000490833	KCNS2	Q9ULS6	477 aa		5.35	□□□□□ -1.55
FN1-223	ENST00000490833	COL27A1	Q8IZC6	1860 aa	Predicted RBP	5.34	□□□□□ -1.55
FN1-223	ENST00000490833	KMT2E	Q8IZD2	1858 aa		5.34	□□□□□ -1.55
FN1-223	ENST00000490833	DOCK10	Q96BY6	2186 aa		5.34	□□□□□ -1.55
FN1-223	ENST00000490833	IGKV1-6	A0A0C4DH72	117 aa		5.34	□□□□□ -1.55
FN1-223	ENST00000490833	SMCO3	A2RU48	225 aa		5.34	□□□□□ -1.55
FN1-223	ENST00000490833	FAM24A	A6NFZ4	105 aa		5.34	□□□□□ -1.55
FN1-223	ENST00000490833	FNDC10	F2Z333	226 aa		5.34	□□□□□ -1.55
FN1-223	ENST00000490833	SIRPB1	O00241	398 aa		5.34	□□□□□ -1.55
FN1-223	ENST00000490833	PRRG2	O14669	202 aa		5.34	□□□□□ -1.55
FN1-223	ENST00000490833	NKX2-8	O15522	239 aa		5.34	□□□□□ -1.55
FN1-223	ENST00000490833	LYZL6	O75951	148 aa		5.34	□□□□□ -1.55
FN1-223	ENST00000490833	CLDN1	O95832	211 aa		5.34	□□□□□ -1.55
FN1-223	ENST00000490833	S100A9	P06702	114 aa	Known RBP	5.34	□□□□□ -1.55
FN1-223	ENST00000490833	RCC1	P18754	421 aa	Predicted RBP	5.34	□□□□□ -1.55
FN1-223	ENST00000490833	ANOS1	P23352	680 aa		5.34	□□□□□ -1.55
FN1-223	ENST00000490833	PTAFR	P25105	342 aa		5.34	□□□□□ -1.55

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