RNA–Protein interactions for RNA: ENST00000490035.6

LSAMP-205, Transcript of limbic system associated membrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSAMP, Length 9,446 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-205ENST00000490035 DYNLRB2Q8TF09 96 aa7.72□□□□□ -1.17
LSAMP-205ENST00000490035 ZNF714Q96N38 554 aa7.72□□□□□ -1.17
LSAMP-205ENST00000490035 NAGKQ9UJ70 344 aa7.72□□□□□ -1.17
LSAMP-205ENST00000490035 CACNA1IQ9P0X4 2223 aa7.72□□□□□ -1.17
LSAMP-205ENST00000490035 CIRBPQ14011 172 aaKnown RBP7.72□□□□□ -1.17
LSAMP-205ENST00000490035 PRSS41Q7RTY9 318 aa7.72□□□□□ -1.17
LSAMP-205ENST00000490035 C16orf82Q7Z2V1 217 aa7.72□□□□□ -1.17
LSAMP-205ENST00000490035 GVQW1Q8N7I0 195 aa7.72□□□□□ -1.17
LSAMP-205ENST00000490035 FBLIM1Q8WUP2 373 aa7.72□□□□□ -1.17
LSAMP-205ENST00000490035 FLRT3Q9NZU0 649 aa7.72□□□□□ -1.17
LSAMP-205ENST00000490035 SF3B6Q9Y3B4 125 aaKnown RBP7.72□□□□□ -1.17
LSAMP-205ENST00000490035 C3orf80F5H4A9 247 aa7.72□□□□□ -1.17
LSAMP-205ENST00000490035 ASAH2BP0C7U1 165 aa7.72□□□□□ -1.17
LSAMP-205ENST00000490035 SPINK14Q6IE38 97 aa7.72□□□□□ -1.17
LSAMP-205ENST00000490035 SPNS3Q6ZMD2 512 aa7.72□□□□□ -1.17
LSAMP-205ENST00000490035 SMRP1Q8NCR6 262 aa7.72□□□□□ -1.17
LSAMP-205ENST00000490035 OR4A5Q8NH83 315 aa7.72□□□□□ -1.17
LSAMP-205ENST00000490035 FAM216AQ8WUB2 273 aa7.72□□□□□ -1.17
LSAMP-205ENST00000490035 YLPM1P49750 1951 aaKnown RBP7.72□□□□□ -1.17
LSAMP-205ENST00000490035 ACAA2P42765 397 aaKnown RBP7.72□□□□□ -1.17
LSAMP-205ENST00000490035 SOX8P57073 446 aa7.72□□□□□ -1.17
LSAMP-205ENST00000490035 TMEM92Q6UXU6 159 aa7.72□□□□□ -1.17
LSAMP-205ENST00000490035 FANCMQ8IYD8 2048 aa7.72□□□□□ -1.17
LSAMP-205ENST00000490035 PRR33A8MZF0 331 aa7.72□□□□□ -1.17
LSAMP-205ENST00000490035 UCP3P55916 312 aa7.72□□□□□ -1.17
LSAMP-205ENST00000490035 RPL31P62899 125 aaKnown RBP7.72□□□□□ -1.17
LSAMP-205ENST00000490035 MMD2Q8IY49 270 aa7.72□□□□□ -1.17
LSAMP-205ENST00000490035 PTPMT1Q8WUK0 201 aaPredicted RBP7.72□□□□□ -1.17
LSAMP-205ENST00000490035 MRGPRFQ96AM1 343 aa7.72□□□□□ -1.17
LSAMP-205ENST00000490035 MRPL32Q9BYC8 188 aaKnown RBP7.72□□□□□ -1.17
LSAMP-205ENST00000490035 FOXD3Q9UJU5 478 aaPredicted RBP7.72□□□□□ -1.17
LSAMP-205ENST00000490035 LOC390937A0A1W2PQ73 354 aa7.72□□□□□ -1.17
LSAMP-205ENST00000490035 PTP4A3O75365 173 aa7.72□□□□□ -1.17
LSAMP-205ENST00000490035 RFESDQ8TAC1 157 aa7.72□□□□□ -1.17
LSAMP-205ENST00000490035 GALNT14Q96FL9 552 aa7.72□□□□□ -1.17
LSAMP-205ENST00000490035 LPAR5Q9H1C0 372 aa7.72□□□□□ -1.17
LSAMP-205ENST00000490035 DOCK11Q5JSL3 2073 aa7.72□□□□□ -1.17
LSAMP-205ENST00000490035 FOXC1Q12948 553 aa7.71□□□□□ -1.17
LSAMP-205ENST00000490035 NSUN5P2Q63ZY6 315 aa7.71□□□□□ -1.17
LSAMP-205ENST00000490035 AMER3Q8N944 861 aa7.71□□□□□ -1.17
LSAMP-205ENST00000490035 SMIM12Q96EX1 92 aa7.71□□□□□ -1.17
LSAMP-205ENST00000490035 SNX22Q96L94 193 aa7.71□□□□□ -1.17
LSAMP-205ENST00000490035 TMUB1Q9BVT8 246 aa7.71□□□□□ -1.17
LSAMP-205ENST00000490035 PLA2G2FQ9BZM2 168 aa7.71□□□□□ -1.17
LSAMP-205ENST00000490035 PPIAL4EA0A075B759 164 aa7.71□□□□□ -1.17
LSAMP-205ENST00000490035 FBLL1A6NHQ2 334 aaKnown RBP7.71□□□□□ -1.17
LSAMP-205ENST00000490035 PPIAL4DF5H284 164 aa7.71□□□□□ -1.17
LSAMP-205ENST00000490035 PPIAL4FP0DN26 164 aa7.71□□□□□ -1.17
LSAMP-205ENST00000490035 OR8G5Q8NG78 346 aa7.71□□□□□ -1.17
LSAMP-205ENST00000490035 OR10J6PQ8NGY7 276 aa7.71□□□□□ -1.17
LSAMP-205ENST00000490035 ZNF721Q8TF20 911 aa7.71□□□□□ -1.17
LSAMP-205ENST00000490035 ORAI1Q96D31 301 aa7.71□□□□□ -1.17
LSAMP-205ENST00000490035 FAM60AQ9NP50 221 aa7.71□□□□□ -1.17
LSAMP-205ENST00000490035 TUBD1Q9UJT1 453 aa7.71□□□□□ -1.17
LSAMP-205ENST00000490035 PPIAL4AQ9Y536 164 aa7.71□□□□□ -1.17
LSAMP-205ENST00000490035 DEFB108AA8MXU0 73 aa7.71□□□□□ -1.17
LSAMP-205ENST00000490035 RPL29P47914 159 aaKnown RBP7.71□□□□□ -1.17
LSAMP-205ENST00000490035 RTP5Q14D33 572 aa7.71□□□□□ -1.17
LSAMP-205ENST00000490035 DHRS13Q6UX07 377 aa7.71□□□□□ -1.17
LSAMP-205ENST00000490035 Q6ZS52 159 aa7.71□□□□□ -1.17
LSAMP-205ENST00000490035 TMEM171Q8WVE6 324 aa7.71□□□□□ -1.17
LSAMP-205ENST00000490035 AQP10Q96PS8 301 aa7.71□□□□□ -1.17
LSAMP-205ENST00000490035 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.71□□□□□ -1.18
LSAMP-205ENST00000490035 SNURFLB1AK76 121 aa7.71□□□□□ -1.18
LSAMP-205ENST00000490035 CDIPTO14735 213 aa7.71□□□□□ -1.18
LSAMP-205ENST00000490035 EID2BQ96D98 161 aa7.71□□□□□ -1.18
LSAMP-205ENST00000490035 TMEM78Q5T7P6 136 aa7.71□□□□□ -1.18
LSAMP-205ENST00000490035 TUSC5Q8IXB3 177 aa7.71□□□□□ -1.18
LSAMP-205ENST00000490035 SP7Q8TDD2 431 aaPredicted RBP7.71□□□□□ -1.18
LSAMP-205ENST00000490035 CDX2Q99626 313 aaPredicted RBP7.71□□□□□ -1.18
LSAMP-205ENST00000490035 IGHV3-64DA0A0J9YX35 117 aa7.71□□□□□ -1.18
LSAMP-205ENST00000490035 FGF5P12034 268 aa7.71□□□□□ -1.18
LSAMP-205ENST00000490035 SELENOPP49908 381 aa7.71□□□□□ -1.18
LSAMP-205ENST00000490035 SPANXN1Q5VSR9 72 aa7.71□□□□□ -1.18
LSAMP-205ENST00000490035 OR4B1Q8NGF8 309 aa7.71□□□□□ -1.18
LSAMP-205ENST00000490035 PRDM14Q9GZV8 571 aa7.71□□□□□ -1.18
LSAMP-205ENST00000490035 SH3BGRL3Q9H299 93 aa7.71□□□□□ -1.18
LSAMP-205ENST00000490035 RCC2Q9P258 522 aaKnown RBP7.71□□□□□ -1.18
LSAMP-205ENST00000490035 JOSD1Q15040 202 aaPredicted RBP7.71□□□□□ -1.18
LSAMP-205ENST00000490035 C1orf185Q5T7R7 199 aa7.71□□□□□ -1.18
LSAMP-205ENST00000490035 TMEM222Q9H0R3 208 aa7.71□□□□□ -1.18
LSAMP-205ENST00000490035 ALPK2Q86TB3 2170 aa7.71□□□□□ -1.18
LSAMP-205ENST00000490035 VSIG8P0DPA2 414 aa7.71□□□□□ -1.18
LSAMP-205ENST00000490035 PRDX2P32119 198 aa7.71□□□□□ -1.18
LSAMP-205ENST00000490035 LIMS1P48059 325 aa7.71□□□□□ -1.18
LSAMP-205ENST00000490035 RPS11P62280 158 aaKnown RBP eCLIP7.71□□□□□ -1.18
LSAMP-205ENST00000490035 C1QTNF12Q5T7M4 302 aa7.71□□□□□ -1.18
LSAMP-205ENST00000490035 EBLN2Q6P2I7 272 aa7.71□□□□□ -1.18
LSAMP-205ENST00000490035 VCX2Q9H322 139 aa7.71□□□□□ -1.18
LSAMP-205ENST00000490035 SRD5A3Q9H8P0 318 aa7.71□□□□□ -1.18
LSAMP-205ENST00000490035 VSIG4Q9Y279 399 aa7.71□□□□□ -1.18
LSAMP-205ENST00000490035 NYNRINQ9P2P1 1898 aaKnown RBP7.71□□□□□ -1.18
LSAMP-205ENST00000490035 CLEC12BQ2HXU8 276 aa7.7□□□□□ -1.18
LSAMP-205ENST00000490035 OR11H7Q8NGC8 314 aa7.7□□□□□ -1.18
LSAMP-205ENST00000490035 MIXL1Q9H2W2 232 aa7.7□□□□□ -1.18
LSAMP-205ENST00000490035 TRBV5-5A0A0J9YX44 114 aa7.7□□□□□ -1.18
LSAMP-205ENST00000490035 A0A1W2PPC1 479 aa7.7□□□□□ -1.18
LSAMP-205ENST00000490035 GHRHP01286 108 aa7.7□□□□□ -1.18
LSAMP-205ENST00000490035 UQCRFS1P47985 274 aa7.7□□□□□ -1.18
LSAMP-205ENST00000490035 METAP1P53582 386 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms