RNA–Protein interactions for RNA: ENST00000489629.1

CPSF3-205, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 3

Gene CPSF3, Length 547 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-205ENST00000489629 PSKH1P11801 424 aa0.97□□□□□ -2.25
CPSF3-205ENST00000489629 ORM2P19652 201 aa0.97□□□□□ -2.25
CPSF3-205ENST00000489629 CXCL2P19875 107 aa0.97□□□□□ -2.25
CPSF3-205ENST00000489629 GADD45AP24522 165 aa0.97□□□□□ -2.25
CPSF3-205ENST00000489629 CRABP2P29373 138 aa0.97□□□□□ -2.25
CPSF3-205ENST00000489629 GABRA3P34903 492 aa0.97□□□□□ -2.25
CPSF3-205ENST00000489629 RCVRNP35243 200 aa0.97□□□□□ -2.25
CPSF3-205ENST00000489629 CDC34P49427 236 aaPredicted RBP0.97□□□□□ -2.25
CPSF3-205ENST00000489629 PSMB3P49720 205 aa0.97□□□□□ -2.25
CPSF3-205ENST00000489629 DAPP51397 102 aa0.97□□□□□ -2.25
CPSF3-205ENST00000489629 ACTBP60709 375 aa0.97□□□□□ -2.25
CPSF3-205ENST00000489629 ACTG1P63261 375 aa0.97□□□□□ -2.25
CPSF3-205ENST00000489629 TPM4P67936 248 aa0.97□□□□□ -2.25
CPSF3-205ENST00000489629 FOXF1Q12946 379 aa0.97□□□□□ -2.25
CPSF3-205ENST00000489629 APOFQ13790 326 aa0.97□□□□□ -2.25
CPSF3-205ENST00000489629 PAFAH1B3Q15102 231 aaKnown RBP0.97□□□□□ -2.25
CPSF3-205ENST00000489629 OR8G1Q15617 311 aa0.97□□□□□ -2.25
CPSF3-205ENST00000489629 FAM229BQ4G0N7 80 aa0.97□□□□□ -2.25
CPSF3-205ENST00000489629 DNAL1Q4LDG9 190 aa0.97□□□□□ -2.25
CPSF3-205ENST00000489629 PYCR3Q53H96 274 aa0.97□□□□□ -2.25
CPSF3-205ENST00000489629 CDKL4Q5MAI5 379 aa0.97□□□□□ -2.25
CPSF3-205ENST00000489629 TTC33Q6PID6 262 aaPredicted RBP0.97□□□□□ -2.25
CPSF3-205ENST00000489629 PLEKHG7Q6ZR37 379 aa0.97□□□□□ -2.25
CPSF3-205ENST00000489629 TMPPEQ6ZT21 453 aa0.97□□□□□ -2.25
CPSF3-205ENST00000489629 TCF24Q7RTU0 167 aa0.97□□□□□ -2.25
CPSF3-205ENST00000489629 MSRB3Q8IXL7 192 aa0.97□□□□□ -2.25
CPSF3-205ENST00000489629 HS3ST5Q8IZT8 346 aa0.97□□□□□ -2.25
CPSF3-205ENST00000489629 TMEM251Q8N6I4 163 aa0.97□□□□□ -2.25
CPSF3-205ENST00000489629 FER1L6-AS1Q8NA97 138 aa0.97□□□□□ -2.25
CPSF3-205ENST00000489629 OR10D4PQ8NGN7 298 aa0.97□□□□□ -2.25
CPSF3-205ENST00000489629 LMX1AQ8TE12 382 aa0.97□□□□□ -2.25
CPSF3-205ENST00000489629 SLC37A2Q8TED4 501 aa0.97□□□□□ -2.25
CPSF3-205ENST00000489629 TNFAIP8L1Q8WVP5 186 aa0.97□□□□□ -2.25
CPSF3-205ENST00000489629 RAD51AP1Q96B01 352 aa0.97□□□□□ -2.25
CPSF3-205ENST00000489629 OR52B2Q96RD2 323 aa0.97□□□□□ -2.25
CPSF3-205ENST00000489629 DCUN1D5Q9BTE7 237 aa0.97□□□□□ -2.25
CPSF3-205ENST00000489629 TMEM208Q9BTX3 173 aa0.97□□□□□ -2.25
CPSF3-205ENST00000489629 UGT2B28Q9BY64 529 aa0.97□□□□□ -2.25
CPSF3-205ENST00000489629 PARD6GQ9BYG4 376 aaPredicted RBP0.97□□□□□ -2.25
CPSF3-205ENST00000489629 NSRP1Q9H0G5 558 aaKnown RBP0.97□□□□□ -2.25
CPSF3-205ENST00000489629 GTSF1LQ9H1H1 148 aa0.97□□□□□ -2.25
CPSF3-205ENST00000489629 C11orf49Q9H6J7 331 aa0.97□□□□□ -2.25
CPSF3-205ENST00000489629 ZNHIT6Q9NWK9 470 aaKnown RBP0.97□□□□□ -2.25
CPSF3-205ENST00000489629 MRPS16Q9Y3D3 137 aaKnown RBP0.97□□□□□ -2.25
CPSF3-205ENST00000489629 V9GYY5 206 aaPredicted RBP0.97□□□□□ -2.25
CPSF3-205ENST00000489629 COL18A1P39060 1754 aa0.97□□□□□ -2.25
CPSF3-205ENST00000489629 COL11A1P12107 1806 aaPredicted RBP0.96□□□□□ -2.26
CPSF3-205ENST00000489629 COL5A3P25940 1745 aaPredicted RBP0.96□□□□□ -2.26
CPSF3-205ENST00000489629 IGSF23A1L1A6 192 aa0.96□□□□□ -2.26
CPSF3-205ENST00000489629 B4DEV8 164 aa0.96□□□□□ -2.26
CPSF3-205ENST00000489629 C3orf84H3BNL1 204 aa0.96□□□□□ -2.26
CPSF3-205ENST00000489629 J3QRE1 110 aa0.96□□□□□ -2.26
CPSF3-205ENST00000489629 K7EQS6 105 aa0.96□□□□□ -2.26
CPSF3-205ENST00000489629 CCRL2O00421 344 aa0.96□□□□□ -2.26
CPSF3-205ENST00000489629 EEF1E1O43324 174 aaKnown RBP0.96□□□□□ -2.26
CPSF3-205ENST00000489629 ZNF73O43830 326 aaPredicted RBP0.96□□□□□ -2.26
CPSF3-205ENST00000489629 HPGDSO60760 199 aa0.96□□□□□ -2.26
CPSF3-205ENST00000489629 GYPCP04921 128 aa0.96□□□□□ -2.26
CPSF3-205ENST00000489629 GUSBP08236 651 aa0.96□□□□□ -2.26
CPSF3-205ENST00000489629 FBP1P09467 338 aa0.96□□□□□ -2.26
CPSF3-205ENST00000489629 OR13C7P0DN81 318 aa0.96□□□□□ -2.26
CPSF3-205ENST00000489629 OR12D1P0DN82 309 aa0.96□□□□□ -2.26
CPSF3-205ENST00000489629 COX5BP10606 129 aa0.96□□□□□ -2.26
CPSF3-205ENST00000489629 PSMA1P25786 263 aaKnown RBP0.96□□□□□ -2.26
CPSF3-205ENST00000489629 AGTR1P30556 359 aa0.96□□□□□ -2.26
CPSF3-205ENST00000489629 IFNGR2P38484 337 aa0.96□□□□□ -2.26
CPSF3-205ENST00000489629 GABARAPL2P60520 117 aa0.96□□□□□ -2.26
CPSF3-205ENST00000489629 HPCAP84074 193 aa0.96□□□□□ -2.26
CPSF3-205ENST00000489629 TMEM267Q0VDI3 215 aaPredicted RBP0.96□□□□□ -2.26
CPSF3-205ENST00000489629 TSPAN31Q12999 210 aa0.96□□□□□ -2.26
CPSF3-205ENST00000489629 NOXRED1Q6NXP6 359 aa0.96□□□□□ -2.26
CPSF3-205ENST00000489629 DNM1P34Q6PK57 102 aa0.96□□□□□ -2.26
CPSF3-205ENST00000489629 FAM151BQ6UXP7 276 aa0.96□□□□□ -2.26
CPSF3-205ENST00000489629 FAM19A5Q7Z5A7 132 aaPredicted RBP0.96□□□□□ -2.26
CPSF3-205ENST00000489629 NIT1Q86X76 327 aa0.96□□□□□ -2.26
CPSF3-205ENST00000489629 PLCZ1Q86YW0 608 aa0.96□□□□□ -2.26
CPSF3-205ENST00000489629 OR10D3Q8NH80 312 aa0.96□□□□□ -2.26
CPSF3-205ENST00000489629 SPPL2BQ8TCT7 592 aa0.96□□□□□ -2.26
CPSF3-205ENST00000489629 SMIM19Q96E16 107 aa0.96□□□□□ -2.26
CPSF3-205ENST00000489629 SMIM12Q96EX1 92 aa0.96□□□□□ -2.26
CPSF3-205ENST00000489629 C1QTNF6Q9BXI9 259 aa0.96□□□□□ -2.26
CPSF3-205ENST00000489629 CDCA4Q9BXL8 241 aa0.96□□□□□ -2.26
CPSF3-205ENST00000489629 MROQ9BYG7 248 aa0.96□□□□□ -2.26
CPSF3-205ENST00000489629 DERL2Q9GZP9 239 aa0.96□□□□□ -2.26
CPSF3-205ENST00000489629 SLC22A4Q9H015 551 aa0.96□□□□□ -2.26
CPSF3-205ENST00000489629 TMEM216Q9P0N5 145 aa0.96□□□□□ -2.26
CPSF3-205ENST00000489629 LINC00527Q9UJ94 153 aa0.96□□□□□ -2.26
CPSF3-205ENST00000489629 SBDSQ9Y3A5 250 aaKnown RBP eCLIP0.96□□□□□ -2.26
CPSF3-205ENST00000489629 NYNRINQ9P2P1 1898 aaKnown RBP0.96□□□□□ -2.26
CPSF3-205ENST00000489629 MPDZO75970 2070 aa0.96□□□□□ -2.26
CPSF3-205ENST00000489629 ADAMTS7Q9UKP4 1686 aa0.95□□□□□ -2.26
CPSF3-205ENST00000489629 SORL1Q92673 2214 aa0.95□□□□□ -2.26
CPSF3-205ENST00000489629 LOC102725191A0A1B0GVB3 256 aa0.95□□□□□ -2.26
CPSF3-205ENST00000489629 C19orf71A6NCJ1 209 aa0.95□□□□□ -2.26
CPSF3-205ENST00000489629 C17orf98A8MV24 154 aa0.95□□□□□ -2.26
CPSF3-205ENST00000489629 M0QYV0 167 aa0.95□□□□□ -2.26
CPSF3-205ENST00000489629 LIN7AO14910 233 aaPredicted RBP0.95□□□□□ -2.26
CPSF3-205ENST00000489629 SLC25A20O43772 301 aa0.95□□□□□ -2.26
CPSF3-205ENST00000489629 HLA-DRAP01903 254 aa0.95□□□□□ -2.26
CPSF3-205ENST00000489629 REG1AP05451 166 aa0.95□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms