RNA–Protein interactions for RNA: ENST00000489241.1

XRN1-213, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-213ENST00000489241 ACY3Q96HD9 319 aa2.29□□□□□ -2.04
XRN1-213ENST00000489241 OR7D2Q96RA2 312 aa2.29□□□□□ -2.04
XRN1-213ENST00000489241 EBNA1BP2Q99848 306 aaKnown RBP2.29□□□□□ -2.04
XRN1-213ENST00000489241 MAP1LC3AQ9H492 121 aa2.29□□□□□ -2.04
XRN1-213ENST00000489241 TAS2R1Q9NYW7 299 aa2.29□□□□□ -2.04
XRN1-213ENST00000489241 SLC23A2Q9UGH3 650 aa2.29□□□□□ -2.04
XRN1-213ENST00000489241 NPATQ14207 1427 aa2.28□□□□□ -2.04
XRN1-213ENST00000489241 GPR179Q6PRD1 2367 aa2.28□□□□□ -2.04
XRN1-213ENST00000489241 SSH2Q76I76 1423 aa2.28□□□□□ -2.04
XRN1-213ENST00000489241 C4orf51C9J302 202 aa2.28□□□□□ -2.04
XRN1-213ENST00000489241 COPEO14579 308 aa2.28□□□□□ -2.04
XRN1-213ENST00000489241 SH2D1AO60880 128 aa2.28□□□□□ -2.04
XRN1-213ENST00000489241 HLA-DRAP01903 254 aa2.28□□□□□ -2.04
XRN1-213ENST00000489241 CRYBA1P05813 215 aa2.28□□□□□ -2.04
XRN1-213ENST00000489241 HSPA9P38646 679 aaKnown RBP2.28□□□□□ -2.04
XRN1-213ENST00000489241 ACTBP60709 375 aa2.28□□□□□ -2.04
XRN1-213ENST00000489241 CXCR4P61073 352 aa2.28□□□□□ -2.04
XRN1-213ENST00000489241 ACTG1P63261 375 aa2.28□□□□□ -2.04
XRN1-213ENST00000489241 BSPH1Q075Z2 132 aa2.28□□□□□ -2.04
XRN1-213ENST00000489241 TMEM267Q0VDI3 215 aaPredicted RBP2.28□□□□□ -2.04
XRN1-213ENST00000489241 DHRS2Q13268 280 aa2.28□□□□□ -2.04
XRN1-213ENST00000489241 MAPK14Q16539 360 aa2.28□□□□□ -2.04
XRN1-213ENST00000489241 KRTAP25-1Q3LHN0 102 aa2.28□□□□□ -2.04
XRN1-213ENST00000489241 OGFRL1Q5TC84 451 aaPredicted RBP2.28□□□□□ -2.04
XRN1-213ENST00000489241 LRRN1Q6UXK5 716 aa2.28□□□□□ -2.04
XRN1-213ENST00000489241 LYZL2Q7Z4W2 148 aa2.28□□□□□ -2.04
XRN1-213ENST00000489241 ATP5L2Q7Z4Y8 100 aa2.28□□□□□ -2.04
XRN1-213ENST00000489241 MED18Q9BUE0 208 aa2.28□□□□□ -2.04
XRN1-213ENST00000489241 BCL2L14Q9BZR8 327 aa2.28□□□□□ -2.04
XRN1-213ENST00000489241 MED28Q9H204 178 aa2.28□□□□□ -2.04
XRN1-213ENST00000489241 DUSP21Q9H596 190 aa2.28□□□□□ -2.04
XRN1-213ENST00000489241 ADGRL1O94910 1474 aa2.27□□□□□ -2.05
XRN1-213ENST00000489241 COL1A2P08123 1366 aa2.27□□□□□ -2.05
XRN1-213ENST00000489241 EEF1E1O43324 174 aaKnown RBP2.27□□□□□ -2.05
XRN1-213ENST00000489241 IGLV3-19P01714 112 aa2.27□□□□□ -2.05
XRN1-213ENST00000489241 IL6P05231 212 aa2.27□□□□□ -2.05
XRN1-213ENST00000489241 CD5P06127 495 aa2.27□□□□□ -2.05
XRN1-213ENST00000489241 OR12D1P0DN82 309 aa2.27□□□□□ -2.05
XRN1-213ENST00000489241 HRES1P13985 223 aa2.27□□□□□ -2.05
XRN1-213ENST00000489241 TSPAN31Q12999 210 aa2.27□□□□□ -2.05
XRN1-213ENST00000489241 PPP1R1AQ13522 171 aa2.27□□□□□ -2.05
XRN1-213ENST00000489241 OR8G1Q15617 311 aa2.27□□□□□ -2.05
XRN1-213ENST00000489241 SPIN4Q56A73 249 aa2.27□□□□□ -2.05
XRN1-213ENST00000489241 WDR59Q6PJI9 974 aa2.27□□□□□ -2.05
XRN1-213ENST00000489241 ZNF565Q8N9K5 539 aa2.27□□□□□ -2.05
XRN1-213ENST00000489241 PIGXQ8TBF5 258 aa2.27□□□□□ -2.05
XRN1-213ENST00000489241 EEF1AKMT1Q8WVE0 214 aa2.27□□□□□ -2.05
XRN1-213ENST00000489241 TMBIM1Q969X1 311 aa2.27□□□□□ -2.05
XRN1-213ENST00000489241 HIST1H2BAQ96A08 127 aa2.27□□□□□ -2.05
XRN1-213ENST00000489241 PTH2Q96A98 100 aa2.27□□□□□ -2.05
XRN1-213ENST00000489241 OR51B6Q9H340 312 aa2.27□□□□□ -2.05
XRN1-213ENST00000489241 MRPS16Q9Y3D3 137 aaKnown RBP2.27□□□□□ -2.05
XRN1-213ENST00000489241 HDGFL3Q9Y3E1 203 aa2.27□□□□□ -2.05
XRN1-213ENST00000489241 IGKV1D-17A0A075B6S4 117 aa2.26□□□□□ -2.05
XRN1-213ENST00000489241 TEX50A0A1B0GTY4 177 aa2.26□□□□□ -2.05
XRN1-213ENST00000489241 GGTLC3B5MD39 225 aa2.26□□□□□ -2.05
XRN1-213ENST00000489241 CPSF4O95639 269 aaKnown RBP2.26□□□□□ -2.05
XRN1-213ENST00000489241 CDK2P24941 298 aa2.26□□□□□ -2.05
XRN1-213ENST00000489241 RPS12P25398 132 aaKnown RBP2.26□□□□□ -2.05
XRN1-213ENST00000489241 RPL12P30050 165 aaKnown RBP2.26□□□□□ -2.05
XRN1-213ENST00000489241 OR1E2P47887 323 aa2.26□□□□□ -2.05
XRN1-213ENST00000489241 IHHQ14623 411 aa2.26□□□□□ -2.05
XRN1-213ENST00000489241 PDK2Q15119 407 aa2.26□□□□□ -2.05
XRN1-213ENST00000489241 LGALSLQ3ZCW2 172 aaPredicted RBP2.26□□□□□ -2.05
XRN1-213ENST00000489241 AMMECR1LQ6DCA0 310 aa2.26□□□□□ -2.05
XRN1-213ENST00000489241 TNFAIP8L2Q6P589 184 aaPredicted RBP2.26□□□□□ -2.05
XRN1-213ENST00000489241 CD200R1LQ6Q8B3 271 aa2.26□□□□□ -2.05
XRN1-213ENST00000489241 DCXRQ7Z4W1 244 aa2.26□□□□□ -2.05
XRN1-213ENST00000489241 LYPD6Q86Y78 171 aa2.26□□□□□ -2.05
XRN1-213ENST00000489241 C10orf67Q8IYJ2 551 aa2.26□□□□□ -2.05
XRN1-213ENST00000489241 EIF4E3Q8N5X7 224 aaKnown RBP2.26□□□□□ -2.05
XRN1-213ENST00000489241 Q8NAQ8 132 aa2.26□□□□□ -2.05
XRN1-213ENST00000489241 OR2V1Q8NHB1 315 aa2.26□□□□□ -2.05
XRN1-213ENST00000489241 CD200R1Q8TD46 325 aa2.26□□□□□ -2.05
XRN1-213ENST00000489241 RAB8BQ92930 207 aa2.26□□□□□ -2.05
XRN1-213ENST00000489241 ABHD14BQ96IU4 210 aa2.26□□□□□ -2.05
XRN1-213ENST00000489241 EIF5A2Q9GZV4 153 aaKnown RBP2.26□□□□□ -2.05
XRN1-213ENST00000489241 ASF1BQ9NVP2 202 aa2.26□□□□□ -2.05
XRN1-213ENST00000489241 BABAM2Q9NXR7 383 aa2.26□□□□□ -2.05
XRN1-213ENST00000489241 WASHC3Q9Y3C0 194 aa2.26□□□□□ -2.05
XRN1-213ENST00000489241 CRB1P82279 1406 aa2.25□□□□□ -2.05
XRN1-213ENST00000489241 C9orf84Q5VXU9 1444 aa2.25□□□□□ -2.05
XRN1-213ENST00000489241 SEC16AO15027 2179 aa2.25□□□□□ -2.05
XRN1-213ENST00000489241 A0A1B0GU33 70 aa2.25□□□□□ -2.05
XRN1-213ENST00000489241 MRASO14807 208 aa2.25□□□□□ -2.05
XRN1-213ENST00000489241 TGOLN2O43493 480 aa2.25□□□□□ -2.05
XRN1-213ENST00000489241 DENRO43583 198 aaKnown RBP2.25□□□□□ -2.05
XRN1-213ENST00000489241 SLC25A20O43772 301 aa2.25□□□□□ -2.05
XRN1-213ENST00000489241 DEDDO75618 318 aa2.25□□□□□ -2.05
XRN1-213ENST00000489241 IFNA5P01569 189 aa2.25□□□□□ -2.05
XRN1-213ENST00000489241 IGKV1-17P01599 117 aa2.25□□□□□ -2.05
XRN1-213ENST00000489241 IGLV3-27P01718 113 aa2.25□□□□□ -2.05
XRN1-213ENST00000489241 OPN1SWP03999 348 aa2.25□□□□□ -2.05
XRN1-213ENST00000489241 NQO1P15559 274 aaKnown RBP2.25□□□□□ -2.05
XRN1-213ENST00000489241 ZNF708P17019 499 aa2.25□□□□□ -2.05
XRN1-213ENST00000489241 NKX2-5P52952 324 aaPredicted RBP2.25□□□□□ -2.05
XRN1-213ENST00000489241 HERVK_113P63121 156 aa2.25□□□□□ -2.05
XRN1-213ENST00000489241 PYCR3Q53H96 274 aa2.25□□□□□ -2.05
XRN1-213ENST00000489241 ACSBG2Q5FVE4 666 aa2.25□□□□□ -2.05
XRN1-213ENST00000489241 SCXQ7RTU7 201 aa2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms