RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 PSMB11A5LHX3 300 aa19.75■□□□□ 0.75
HMGN1-217ENST00000489072 LINC01548A6NM66 108 aa19.75■□□□□ 0.75
HMGN1-217ENST00000489072 NCBP2LA6PVI3 153 aaKnown RBP19.75■□□□□ 0.75
HMGN1-217ENST00000489072 MOSP00540 346 aa19.75■□□□□ 0.75
HMGN1-217ENST00000489072 IGHG2P01859 326 aa19.75■□□□□ 0.75
HMGN1-217ENST00000489072 TMEM50BP56557 158 aa19.75■□□□□ 0.75
HMGN1-217ENST00000489072 PLA2G7Q13093 441 aa19.75■□□□□ 0.75
HMGN1-217ENST00000489072 ZNF329Q86UD4 541 aa19.75■□□□□ 0.75
HMGN1-217ENST00000489072 FAM3DQ96BQ1 224 aa19.75■□□□□ 0.75
HMGN1-217ENST00000489072 CHMP1AQ9HD42 196 aaPredicted RBP19.75■□□□□ 0.75
HMGN1-217ENST00000489072 LINC00527Q9UJ94 153 aa19.75■□□□□ 0.75
HMGN1-217ENST00000489072 LRRC42Q9Y546 428 aa19.75■□□□□ 0.75
HMGN1-217ENST00000489072 LDLRAD4O15165 306 aa19.74■□□□□ 0.75
HMGN1-217ENST00000489072 LSAMPQ13449 338 aa19.74■□□□□ 0.75
HMGN1-217ENST00000489072 C2orf76Q3KRA6 126 aa19.74■□□□□ 0.75
HMGN1-217ENST00000489072 LY6G6FQ5SQ64 297 aa19.74■□□□□ 0.75
HMGN1-217ENST00000489072 HES5Q5TA89 166 aa19.74■□□□□ 0.75
HMGN1-217ENST00000489072 CD200R1LQ6Q8B3 271 aa19.74■□□□□ 0.75
HMGN1-217ENST00000489072 SLC35E3Q7Z769 313 aa19.74■□□□□ 0.75
HMGN1-217ENST00000489072 ABRACLQ9P1F3 81 aa19.74■□□□□ 0.75
HMGN1-217ENST00000489072 DNAH3Q8TD57 4116 aa19.73■□□□□ 0.75
HMGN1-217ENST00000489072 TRBV6-6A0A0A6YYG2 114 aa19.73■□□□□ 0.75
HMGN1-217ENST00000489072 SERPINE3A8MV23 424 aa19.73■□□□□ 0.75
HMGN1-217ENST00000489072 VEGFCP49767 419 aa19.73■□□□□ 0.75
HMGN1-217ENST00000489072 OR10A3P58181 314 aa19.73■□□□□ 0.75
HMGN1-217ENST00000489072 KPRPQ5T749 579 aaPredicted RBP19.73■□□□□ 0.75
HMGN1-217ENST00000489072 SETD6Q8TBK2 473 aa19.73■□□□□ 0.75
HMGN1-217ENST00000489072 IL1F10Q8WWZ1 152 aa19.73■□□□□ 0.75
HMGN1-217ENST00000489072 S1PR3Q99500 378 aa19.73■□□□□ 0.75
HMGN1-217ENST00000489072 ABCG5Q9H222 651 aa19.73■□□□□ 0.75
HMGN1-217ENST00000489072 LIN7CQ9NUP9 197 aaKnown RBP19.73■□□□□ 0.75
HMGN1-217ENST00000489072 HSF4Q9ULV5 492 aa19.73■□□□□ 0.75
HMGN1-217ENST00000489072 TRAV1-2A0A0B4J238 106 aa19.72■□□□□ 0.75
HMGN1-217ENST00000489072 TMEM272A0A1B0GTI8 110 aa19.72■□□□□ 0.75
HMGN1-217ENST00000489072 DENRO43583 198 aaKnown RBP19.72■□□□□ 0.75
HMGN1-217ENST00000489072 MRPS14O60783 128 aaKnown RBP19.72■□□□□ 0.75
HMGN1-217ENST00000489072 RGS11O94810 467 aa19.72■□□□□ 0.75
HMGN1-217ENST00000489072 GPR12P47775 334 aa19.72■□□□□ 0.75
HMGN1-217ENST00000489072 OR3A3P47888 321 aa19.72■□□□□ 0.75
HMGN1-217ENST00000489072 F2RL1P55085 397 aa19.72■□□□□ 0.75
HMGN1-217ENST00000489072 OXLD1Q5BKU9 147 aa19.72■□□□□ 0.75
HMGN1-217ENST00000489072 KHDC1LQ5JSQ8 128 aa19.72■□□□□ 0.75
HMGN1-217ENST00000489072 MOB1BQ7L9L4 216 aa19.72■□□□□ 0.75
HMGN1-217ENST00000489072 CHPT1Q8WUD6 406 aa19.72■□□□□ 0.75
HMGN1-217ENST00000489072 ARHGAP5-AS1Q96IT6 56 aa19.72■□□□□ 0.75
HMGN1-217ENST00000489072 PECRQ9BY49 303 aa19.72■□□□□ 0.75
HMGN1-217ENST00000489072 MRPL20Q9BYC9 149 aaKnown RBP19.72■□□□□ 0.75
HMGN1-217ENST00000489072 IFI27L2Q9H2X8 130 aa19.72■□□□□ 0.75
HMGN1-217ENST00000489072 STEAP1Q9UHE8 339 aa19.72■□□□□ 0.75
HMGN1-217ENST00000489072 TRDV1A0A1B0GX56 115 aa19.71■□□□□ 0.75
HMGN1-217ENST00000489072 PF4V1P10720 104 aa19.71■□□□□ 0.75
HMGN1-217ENST00000489072 PSMD7P51665 324 aa19.71■□□□□ 0.75
HMGN1-217ENST00000489072 PLAC9Q5JTB6 97 aa19.71■□□□□ 0.75
HMGN1-217ENST00000489072 UBE2UQ5VVX9 321 aa19.71■□□□□ 0.75
HMGN1-217ENST00000489072 SPARTQ8N0X7 666 aa19.71■□□□□ 0.75
HMGN1-217ENST00000489072 FAM71E2Q8N5Q1 922 aa19.71■□□□□ 0.75
HMGN1-217ENST00000489072 OR2AK2Q8NG84 335 aa19.71■□□□□ 0.75
HMGN1-217ENST00000489072 PARP12Q9H0J9 701 aaKnown RBP19.71■□□□□ 0.75
HMGN1-217ENST00000489072 RIMS4Q9H426 269 aaPredicted RBP19.71■□□□□ 0.75
HMGN1-217ENST00000489072 SAA2-SAA4A0A096LPE2 208 aa19.7■□□□□ 0.74
HMGN1-217ENST00000489072 SAA2P0DJI9 122 aaPredicted RBP19.7■□□□□ 0.74
HMGN1-217ENST00000489072 ZNF833PQ6ZTB9 187 aa19.7■□□□□ 0.74
HMGN1-217ENST00000489072 STPG2Q8N412 459 aa19.7■□□□□ 0.74
HMGN1-217ENST00000489072 OR8H1Q8NGG4 311 aa19.7■□□□□ 0.74
HMGN1-217ENST00000489072 NABP2Q9BQ15 211 aa19.7■□□□□ 0.74
HMGN1-217ENST00000489072 PDCD5O14737 125 aa19.69■□□□□ 0.74
HMGN1-217ENST00000489072 ST8SIA5O15466 376 aa19.69■□□□□ 0.74
HMGN1-217ENST00000489072 HLA-DRB3P79483 266 aa19.69■□□□□ 0.74
HMGN1-217ENST00000489072 FOXRED2Q8IWF2 684 aa19.69■□□□□ 0.74
HMGN1-217ENST00000489072 WFDC9Q8NEX5 89 aa19.69■□□□□ 0.74
HMGN1-217ENST00000489072 OR56B1Q8NGI3 324 aa19.69■□□□□ 0.74
HMGN1-217ENST00000489072 RASL11BQ9BPW5 248 aa19.69■□□□□ 0.74
HMGN1-217ENST00000489072 HSPB9Q9BQS6 159 aa19.69■□□□□ 0.74
HMGN1-217ENST00000489072 Q9H521 79 aa19.69■□□□□ 0.74
HMGN1-217ENST00000489072 Q9N2K0 584 aa19.69■□□□□ 0.74
HMGN1-217ENST00000489072 IFITM5A6NNB3 132 aa19.68■□□□□ 0.74
HMGN1-217ENST00000489072 C22orf42Q6IC83 251 aa19.68■□□□□ 0.74
HMGN1-217ENST00000489072 NR2C2APQ86WQ0 139 aa19.68■□□□□ 0.74
HMGN1-217ENST00000489072 RITA1Q96K30 269 aa19.68■□□□□ 0.74
HMGN1-217ENST00000489072 ZNF251Q9BRH9 671 aa19.68■□□□□ 0.74
HMGN1-217ENST00000489072 C12orf4Q9NQ89 552 aa19.68■□□□□ 0.74
HMGN1-217ENST00000489072 OR1A1Q9P1Q5 309 aa19.68■□□□□ 0.74
HMGN1-217ENST00000489072 RAB22AQ9UL26 194 aa19.68■□□□□ 0.74
HMGN1-217ENST00000489072 A0A0B4J203 849 aa19.67■□□□□ 0.74
HMGN1-217ENST00000489072 AP4M1O00189 453 aa19.67■□□□□ 0.74
HMGN1-217ENST00000489072 PRB2P02812 416 aaPredicted RBP19.67■□□□□ 0.74
HMGN1-217ENST00000489072 SCTP09683 121 aa19.67■□□□□ 0.74
HMGN1-217ENST00000489072 GALP22466 123 aa19.67■□□□□ 0.74
HMGN1-217ENST00000489072 MYL9P24844 172 aa19.67■□□□□ 0.74
HMGN1-217ENST00000489072 RPL23AP62750 156 aaKnown RBP19.67■□□□□ 0.74
HMGN1-217ENST00000489072 MOGAT2Q3SYC2 334 aa19.67■□□□□ 0.74
HMGN1-217ENST00000489072 C18orf65Q6ZTR6 163 aa19.67■□□□□ 0.74
HMGN1-217ENST00000489072 CMSS1Q9BQ75 279 aaKnown RBP19.67■□□□□ 0.74
HMGN1-217ENST00000489072 SLC23A1Q9UHI7 598 aa19.67■□□□□ 0.74
HMGN1-217ENST00000489072 KCNK7Q9Y2U2 307 aa19.67■□□□□ 0.74
HMGN1-217ENST00000489072 PF4P02776 101 aa19.66■□□□□ 0.74
HMGN1-217ENST00000489072 CD33P20138 364 aa19.66■□□□□ 0.74
HMGN1-217ENST00000489072 RAB3BP20337 219 aa19.66■□□□□ 0.74
HMGN1-217ENST00000489072 CNTFRP26992 372 aa19.66■□□□□ 0.74
HMGN1-217ENST00000489072 PSMB9P28065 219 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms