RNA–Protein interactions for RNA: ENST00000488989.1

CLDN11-208, Transcript of claudin 11, humanhuman

TSL 4

Gene CLDN11, Length 600 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-208ENST00000488989 TRAV20A0A0B4J274 112 aa13.1□□□□□ -0.31
CLDN11-208ENST00000488989 IGKV1D-13A0A0B4J2D9 117 aa13.1□□□□□ -0.31
CLDN11-208ENST00000488989 IGKV1-13P0DP09 117 aa13.1□□□□□ -0.31
CLDN11-208ENST00000488989 SPNP16150 400 aa13.1□□□□□ -0.31
CLDN11-208ENST00000488989 GZMKP49863 264 aa13.1□□□□□ -0.31
CLDN11-208ENST00000488989 HERV-K104P61576 105 aa13.1□□□□□ -0.31
CLDN11-208ENST00000488989 TMEM249Q2WGJ8 235 aa13.1□□□□□ -0.31
CLDN11-208ENST00000488989 UTF1Q5T230 341 aa13.1□□□□□ -0.31
CLDN11-208ENST00000488989 GLCCI1Q86VQ1 547 aa13.1□□□□□ -0.31
CLDN11-208ENST00000488989 LINC00311Q8N616 119 aa13.1□□□□□ -0.31
CLDN11-208ENST00000488989 OR10V1Q8NGI7 309 aa13.1□□□□□ -0.31
CLDN11-208ENST00000488989 AGMATQ9BSE5 352 aa13.1□□□□□ -0.31
CLDN11-208ENST00000488989 TMEM133Q9H2Q1 129 aa13.1□□□□□ -0.31
CLDN11-208ENST00000488989 METTL8Q9H825 291 aaKnown RBP13.1□□□□□ -0.31
CLDN11-208ENST00000488989 GPR132Q9UNW8 380 aa13.1□□□□□ -0.31
CLDN11-208ENST00000488989 NUBP2Q9Y5Y2 271 aa13.1□□□□□ -0.31
CLDN11-208ENST00000488989 ABCA1O95477 2261 aa13.1□□□□□ -0.31
CLDN11-208ENST00000488989 FAM172BPA6NC97 362 aa13.09□□□□□ -0.31
CLDN11-208ENST00000488989 IGHV4-31P0DP07 118 aa13.09□□□□□ -0.31
CLDN11-208ENST00000488989 GATA3P23771 443 aa13.09□□□□□ -0.31
CLDN11-208ENST00000488989 NFYBP25208 207 aa13.09□□□□□ -0.31
CLDN11-208ENST00000488989 MECP2P51608 486 aaKnown RBP13.09□□□□□ -0.31
CLDN11-208ENST00000488989 LUMP51884 338 aaPredicted RBP13.09□□□□□ -0.31
CLDN11-208ENST00000488989 ZNF134P52741 427 aa13.09□□□□□ -0.31
CLDN11-208ENST00000488989 MSMO1Q15800 293 aa13.09□□□□□ -0.31
CLDN11-208ENST00000488989 CCBE1Q6UXH8 406 aaPredicted RBP13.09□□□□□ -0.31
CLDN11-208ENST00000488989 SLC25A48Q6ZT89 311 aaKnown RBP13.09□□□□□ -0.31
CLDN11-208ENST00000488989 CENPSQ8N2Z9 138 aa13.09□□□□□ -0.31
CLDN11-208ENST00000488989 MARCH1Q8TCQ1 289 aa13.09□□□□□ -0.31
CLDN11-208ENST00000488989 TNFRSF14Q92956 283 aa13.09□□□□□ -0.31
CLDN11-208ENST00000488989 SCGB3A2Q96PL1 93 aa13.09□□□□□ -0.31
CLDN11-208ENST00000488989 MARVELD1Q9BSK0 173 aa13.09□□□□□ -0.31
CLDN11-208ENST00000488989 RSRP1Q9BUV0 290 aa13.09□□□□□ -0.31
CLDN11-208ENST00000488989 SUCNR1Q9BXA5 334 aa13.09□□□□□ -0.31
CLDN11-208ENST00000488989 LPAR2Q9HBW0 351 aa13.09□□□□□ -0.31
CLDN11-208ENST00000488989 PSG11Q9UQ72 335 aa13.09□□□□□ -0.31
CLDN11-208ENST00000488989 GAB2Q9UQC2 676 aa13.09□□□□□ -0.31
CLDN11-208ENST00000488989 VSIG4Q9Y279 399 aa13.09□□□□□ -0.31
CLDN11-208ENST00000488989 MYO9AB2RTY4 2548 aa13.08□□□□□ -0.32
CLDN11-208ENST00000488989 RAB7AP51149 207 aa13.08□□□□□ -0.32
CLDN11-208ENST00000488989 RAG2P55895 527 aa13.08□□□□□ -0.32
CLDN11-208ENST00000488989 FXYD4P59646 89 aa13.08□□□□□ -0.32
CLDN11-208ENST00000488989 TRIM16LQ309B1 348 aa13.08□□□□□ -0.32
CLDN11-208ENST00000488989 CT45A1Q5HYN5 189 aa13.08□□□□□ -0.32
CLDN11-208ENST00000488989 METTL11BQ5VVY1 283 aa13.08□□□□□ -0.32
CLDN11-208ENST00000488989 LPCAT3Q6P1A2 487 aa13.08□□□□□ -0.32
CLDN11-208ENST00000488989 PLET1Q6UQ28 207 aa13.08□□□□□ -0.32
CLDN11-208ENST00000488989 SLC38A6Q8IZM9 456 aa13.08□□□□□ -0.32
CLDN11-208ENST00000488989 MAPK1IP1LQ8NDC0 245 aa13.08□□□□□ -0.32
CLDN11-208ENST00000488989 OR2AK2Q8NG84 335 aa13.08□□□□□ -0.32
CLDN11-208ENST00000488989 OR9G1Q8NH87 305 aa13.08□□□□□ -0.32
CLDN11-208ENST00000488989 CT45A3Q8NHU0 189 aa13.08□□□□□ -0.32
CLDN11-208ENST00000488989 TMEM186Q96B77 213 aa13.08□□□□□ -0.32
CLDN11-208ENST00000488989 CREB3L1Q96BA8 519 aa13.08□□□□□ -0.32
CLDN11-208ENST00000488989 UPRTQ96BW1 309 aa13.08□□□□□ -0.32
CLDN11-208ENST00000488989 MSI2Q96DH6 328 aaKnown RBP13.08□□□□□ -0.32
CLDN11-208ENST00000488989 ZNF486Q96H40 463 aaPredicted RBP13.08□□□□□ -0.32
CLDN11-208ENST00000488989 TBX15Q96SF7 602 aa13.08□□□□□ -0.32
CLDN11-208ENST00000488989 ABHD14AQ9BUJ0 271 aa13.08□□□□□ -0.32
CLDN11-208ENST00000488989 C20orf85Q9H1P6 137 aa13.08□□□□□ -0.32
CLDN11-208ENST00000488989 ZNF469Q96JG9 3925 aaPredicted RBP13.07□□□□□ -0.32
CLDN11-208ENST00000488989 FLNBO75369 2602 aaKnown RBP13.07□□□□□ -0.32
CLDN11-208ENST00000488989 IGHV2-26A0A0B4J1V2 119 aa13.07□□□□□ -0.32
CLDN11-208ENST00000488989 J3QR06 171 aa13.07□□□□□ -0.32
CLDN11-208ENST00000488989 SLC31A2O15432 143 aa13.07□□□□□ -0.32
CLDN11-208ENST00000488989 SLC22A5O76082 557 aa13.07□□□□□ -0.32
CLDN11-208ENST00000488989 CTSDP07339 412 aaPredicted RBP13.07□□□□□ -0.32
CLDN11-208ENST00000488989 OR8U9P0C7N5 309 aa13.07□□□□□ -0.32
CLDN11-208ENST00000488989 GNRHRP30968 328 aa13.07□□□□□ -0.32
CLDN11-208ENST00000488989 HCP5Q6MZN7 132 aa13.07□□□□□ -0.32
CLDN11-208ENST00000488989 VMO1Q7Z5L0 202 aa13.07□□□□□ -0.32
CLDN11-208ENST00000488989 ABHD12Q8N2K0 398 aa13.07□□□□□ -0.32
CLDN11-208ENST00000488989 OR11H6Q8NGC7 330 aa13.07□□□□□ -0.32
CLDN11-208ENST00000488989 OR8U1Q8NH10 309 aa13.07□□□□□ -0.32
CLDN11-208ENST00000488989 ZFAND1Q8TCF1 268 aa13.07□□□□□ -0.32
CLDN11-208ENST00000488989 SECTM1Q8WVN6 248 aa13.07□□□□□ -0.32
CLDN11-208ENST00000488989 LEAP2Q969E1 77 aa13.07□□□□□ -0.32
CLDN11-208ENST00000488989 TOMM40LQ969M1 308 aa13.07□□□□□ -0.32
CLDN11-208ENST00000488989 RTBDNQ9BSG5 229 aaPredicted RBP13.07□□□□□ -0.32
CLDN11-208ENST00000488989 SLC5A7Q9GZV3 580 aa13.07□□□□□ -0.32
CLDN11-208ENST00000488989 MMP28Q9H239 520 aa13.07□□□□□ -0.32
CLDN11-208ENST00000488989 IFI27L2Q9H2X8 130 aa13.07□□□□□ -0.32
CLDN11-208ENST00000488989 GHITMQ9H3K2 345 aa13.07□□□□□ -0.32
CLDN11-208ENST00000488989 C5orf66Q9H5L9 145 aa13.07□□□□□ -0.32
CLDN11-208ENST00000488989 HEXA-AS1Q9H8Q6 139 aa13.07□□□□□ -0.32
CLDN11-208ENST00000488989 NUDT15Q9NV35 164 aa13.07□□□□□ -0.32
CLDN11-208ENST00000488989 NOTCH2Q04721 2471 aa13.07□□□□□ -0.32
CLDN11-208ENST00000488989 ST8SIA5O15466 376 aa13.06□□□□□ -0.32
CLDN11-208ENST00000488989 TOX4O94842 621 aa13.06□□□□□ -0.32
CLDN11-208ENST00000488989 IGLV1-47P01700 117 aa13.06□□□□□ -0.32
CLDN11-208ENST00000488989 IGLV2-14P01704 120 aa13.06□□□□□ -0.32
CLDN11-208ENST00000488989 H2AFB2P0C5Z0 115 aa13.06□□□□□ -0.32
CLDN11-208ENST00000488989 PGAM2P15259 253 aa13.06□□□□□ -0.32
CLDN11-208ENST00000488989 RND3P61587 244 aa13.06□□□□□ -0.32
CLDN11-208ENST00000488989 DCAF12L2Q5VW00 463 aa13.06□□□□□ -0.32
CLDN11-208ENST00000488989 NCR3LG1Q68D85 454 aa13.06□□□□□ -0.32
CLDN11-208ENST00000488989 CIARTQ8N365 385 aaPredicted RBP13.06□□□□□ -0.32
CLDN11-208ENST00000488989 ZNF645Q8N7E2 425 aa13.06□□□□□ -0.32
CLDN11-208ENST00000488989 ZBTB34Q8NCN2 500 aa13.06□□□□□ -0.32
CLDN11-208ENST00000488989 BEND2Q8NDZ0 799 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms