RNA–Protein interactions for RNA: ENST00000488920.2

CCHCR1-215, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 715 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-215ENST00000488920 SETD6Q8TBK2 473 aa9.38□□□□□ -0.91
CCHCR1-215ENST00000488920 IL1F10Q8WWZ1 152 aa9.38□□□□□ -0.91
CCHCR1-215ENST00000488920 RITA1Q96K30 269 aa9.38□□□□□ -0.91
CCHCR1-215ENST00000488920 MRPL20Q9BYC9 149 aaKnown RBP9.38□□□□□ -0.91
CCHCR1-215ENST00000488920 CCDC90BQ9GZT6 254 aa9.38□□□□□ -0.91
CCHCR1-215ENST00000488920 DUSP21Q9H596 190 aa9.38□□□□□ -0.91
CCHCR1-215ENST00000488920 CHMP1AQ9HD42 196 aaPredicted RBP9.38□□□□□ -0.91
CCHCR1-215ENST00000488920 JPT1Q9UK76 154 aa9.38□□□□□ -0.91
CCHCR1-215ENST00000488920 LRRC42Q9Y546 428 aa9.38□□□□□ -0.91
CCHCR1-215ENST00000488920 A0A0A6YYD4 124 aa9.37□□□□□ -0.91
CCHCR1-215ENST00000488920 TMEM14DPA8MWL7 114 aa9.37□□□□□ -0.91
CCHCR1-215ENST00000488920 K7EIL1 84 aa9.37□□□□□ -0.91
CCHCR1-215ENST00000488920 RGS10O43665 173 aa9.37□□□□□ -0.91
CCHCR1-215ENST00000488920 YPEL1O60688 119 aa9.37□□□□□ -0.91
CCHCR1-215ENST00000488920 DUS4LO95620 317 aaKnown RBP9.37□□□□□ -0.91
CCHCR1-215ENST00000488920 BPNT1O95861 308 aa9.37□□□□□ -0.91
CCHCR1-215ENST00000488920 SLC2A2P11168 524 aaPredicted RBP9.37□□□□□ -0.91
CCHCR1-215ENST00000488920 MYF6P23409 242 aa9.37□□□□□ -0.91
CCHCR1-215ENST00000488920 SOX6P35712 828 aa9.37□□□□□ -0.91
CCHCR1-215ENST00000488920 MYCNOSP40205 109 aa9.37□□□□□ -0.91
CCHCR1-215ENST00000488920 MAP2K4P45985 399 aa9.37□□□□□ -0.91
CCHCR1-215ENST00000488920 TPBGQ13641 420 aa9.37□□□□□ -0.91
CCHCR1-215ENST00000488920 HMGN3Q15651 99 aa9.37□□□□□ -0.91
CCHCR1-215ENST00000488920 OR6M1Q8NGM8 313 aa9.37□□□□□ -0.91
CCHCR1-215ENST00000488920 YPEL2Q96QA6 119 aa9.37□□□□□ -0.91
CCHCR1-215ENST00000488920 GFI1Q99684 422 aa9.37□□□□□ -0.91
CCHCR1-215ENST00000488920 TM2D1Q9BX74 207 aa9.37□□□□□ -0.91
CCHCR1-215ENST00000488920 GON7Q9BXV9 100 aa9.37□□□□□ -0.91
CCHCR1-215ENST00000488920 PLEKHJ1Q9NW61 149 aa9.37□□□□□ -0.91
CCHCR1-215ENST00000488920 ABRACLQ9P1F3 81 aa9.37□□□□□ -0.91
CCHCR1-215ENST00000488920 AK6Q9Y3D8 172 aaKnown RBP9.37□□□□□ -0.91
CCHCR1-215ENST00000488920 WI2-2373I1.2A0A1W2PRP0 233 aa9.36□□□□□ -0.91
CCHCR1-215ENST00000488920 CCL24O00175 119 aa9.36□□□□□ -0.91
CCHCR1-215ENST00000488920 SOCS1O15524 211 aa9.36□□□□□ -0.91
CCHCR1-215ENST00000488920 RRP9O43818 475 aaKnown RBP9.36□□□□□ -0.91
CCHCR1-215ENST00000488920 RGS11O94810 467 aa9.36□□□□□ -0.91
CCHCR1-215ENST00000488920 NAPSAO96009 420 aa9.36□□□□□ -0.91
CCHCR1-215ENST00000488920 ARSBP15848 533 aa9.36□□□□□ -0.91
CCHCR1-215ENST00000488920 CNTFRP26992 372 aa9.36□□□□□ -0.91
CCHCR1-215ENST00000488920 SLC6A1P30531 599 aa9.36□□□□□ -0.91
CCHCR1-215ENST00000488920 RAB25P57735 213 aa9.36□□□□□ -0.91
CCHCR1-215ENST00000488920 ACTBP60709 375 aa9.36□□□□□ -0.91
CCHCR1-215ENST00000488920 FOXE3Q13461 319 aa9.36□□□□□ -0.91
CCHCR1-215ENST00000488920 MMDQ15546 238 aa9.36□□□□□ -0.91
CCHCR1-215ENST00000488920 DEFB121Q5J5C9 76 aa9.36□□□□□ -0.91
CCHCR1-215ENST00000488920 CXorf66Q5JRM2 361 aaPredicted RBP9.36□□□□□ -0.91
CCHCR1-215ENST00000488920 SVOPQ8N4V2 548 aa9.36□□□□□ -0.91
CCHCR1-215ENST00000488920 OR2AK2Q8NG84 335 aa9.36□□□□□ -0.91
CCHCR1-215ENST00000488920 RAX2Q96IS3 184 aa9.36□□□□□ -0.91
CCHCR1-215ENST00000488920 P2RX4Q99571 388 aa9.36□□□□□ -0.91
CCHCR1-215ENST00000488920 NABP2Q9BQ15 211 aa9.36□□□□□ -0.91
CCHCR1-215ENST00000488920 LPAR5Q9H1C0 372 aa9.36□□□□□ -0.91
CCHCR1-215ENST00000488920 PLGRKTQ9HBL7 147 aa9.36□□□□□ -0.91
CCHCR1-215ENST00000488920 STEAP1Q9UHE8 339 aa9.36□□□□□ -0.91
CCHCR1-215ENST00000488920 ZNF107Q9UII5 783 aaPredicted RBP9.36□□□□□ -0.91
CCHCR1-215ENST00000488920 SAA2-SAA4A0A096LPE2 208 aa9.35□□□□□ -0.91
CCHCR1-215ENST00000488920 SLC17A2O00624 439 aa9.35□□□□□ -0.91
CCHCR1-215ENST00000488920 ST8SIA5O15466 376 aa9.35□□□□□ -0.91
CCHCR1-215ENST00000488920 SAA2P0DJI9 122 aaPredicted RBP9.35□□□□□ -0.91
CCHCR1-215ENST00000488920 CPEP16870 476 aa9.35□□□□□ -0.91
CCHCR1-215ENST00000488920 VDAC1P21796 283 aa9.35□□□□□ -0.91
CCHCR1-215ENST00000488920 CRHBPP24387 322 aa9.35□□□□□ -0.91
CCHCR1-215ENST00000488920 FABP5Q01469 135 aa9.35□□□□□ -0.91
CCHCR1-215ENST00000488920 CFHR3Q02985 330 aa9.35□□□□□ -0.91
CCHCR1-215ENST00000488920 EGFEM1PQ0D2K5 195 aa9.35□□□□□ -0.91
CCHCR1-215ENST00000488920 RAB11BQ15907 218 aa9.35□□□□□ -0.91
CCHCR1-215ENST00000488920 DEFB136Q30KP8 78 aa9.35□□□□□ -0.91
CCHCR1-215ENST00000488920 LY6G6FQ5SQ64 297 aa9.35□□□□□ -0.91
CCHCR1-215ENST00000488920 ZNF880Q6PDB4 577 aa9.35□□□□□ -0.91
CCHCR1-215ENST00000488920 ZNF833PQ6ZTB9 187 aa9.35□□□□□ -0.91
CCHCR1-215ENST00000488920 KCTD7Q96MP8 289 aa9.35□□□□□ -0.91
CCHCR1-215ENST00000488920 ZNF251Q9BRH9 671 aa9.35□□□□□ -0.91
CCHCR1-215ENST00000488920 HDHD3Q9BSH5 251 aaPredicted RBP9.35□□□□□ -0.91
CCHCR1-215ENST00000488920 URM1Q9BTM9 101 aaKnown RBP9.35□□□□□ -0.91
CCHCR1-215ENST00000488920 ANKRD60Q9BZ19 345 aa9.35□□□□□ -0.91
CCHCR1-215ENST00000488920 PARP12Q9H0J9 701 aaKnown RBP9.35□□□□□ -0.91
CCHCR1-215ENST00000488920 IFI27L2Q9H2X8 130 aa9.35□□□□□ -0.91
CCHCR1-215ENST00000488920 ISYNA1Q9NPH2 558 aa9.35□□□□□ -0.91
CCHCR1-215ENST00000488920 AK3Q9UIJ7 227 aa9.35□□□□□ -0.91
CCHCR1-215ENST00000488920 WSB1Q9Y6I7 421 aa9.35□□□□□ -0.91
CCHCR1-215ENST00000488920 ARL6IP5O75915 188 aa9.34□□□□□ -0.91
CCHCR1-215ENST00000488920 IGHG4P01861 327 aa9.34□□□□□ -0.91
CCHCR1-215ENST00000488920 IGF1P05019 195 aa9.34□□□□□ -0.91
CCHCR1-215ENST00000488920 ELANEP08246 267 aa9.34□□□□□ -0.91
CCHCR1-215ENST00000488920 CALRP27797 417 aaKnown RBP9.34□□□□□ -0.91
CCHCR1-215ENST00000488920 CDX1P47902 265 aaPredicted RBP9.34□□□□□ -0.91
CCHCR1-215ENST00000488920 CLDN12P56749 244 aa9.34□□□□□ -0.91
CCHCR1-215ENST00000488920 MLLT11Q13015 90 aaPredicted RBP9.34□□□□□ -0.91
CCHCR1-215ENST00000488920 KIR2DS1Q14954 304 aa9.34□□□□□ -0.91
CCHCR1-215ENST00000488920 TRAM1Q15629 374 aa9.34□□□□□ -0.91
CCHCR1-215ENST00000488920 RPL39P5Q59GN2 51 aa9.34□□□□□ -0.91
CCHCR1-215ENST00000488920 PRSS48Q7RTY5 328 aa9.34□□□□□ -0.91
CCHCR1-215ENST00000488920 FAM89BQ8N5H3 189 aa9.34□□□□□ -0.91
CCHCR1-215ENST00000488920 RNF152Q8N8N0 203 aa9.34□□□□□ -0.91
CCHCR1-215ENST00000488920 DPF1Q92782 380 aa9.34□□□□□ -0.91
CCHCR1-215ENST00000488920 MGLLQ99685 303 aa9.34□□□□□ -0.91
CCHCR1-215ENST00000488920 MCRIP2Q9BUT9 160 aaKnown RBP9.34□□□□□ -0.91
CCHCR1-215ENST00000488920 GPR61Q9BZJ8 451 aa9.34□□□□□ -0.91
CCHCR1-215ENST00000488920 RIMS4Q9H426 269 aaPredicted RBP9.34□□□□□ -0.91
CCHCR1-215ENST00000488920 SLC23A1Q9UHI7 598 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms