RNA–Protein interactions for RNA: ENST00000487711.5

TTC3-220, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-220ENST00000487711 SLC7A11Q9UPY5 501 aa1.98□□□□□ -2.09
TTC3-220ENST00000487711 NDUFAF1Q9Y375 327 aa1.98□□□□□ -2.09
TTC3-220ENST00000487711 TANC1Q9C0D5 1861 aa1.98□□□□□ -2.09
TTC3-220ENST00000487711 MICAL3Q7RTP6 2002 aa1.98□□□□□ -2.09
TTC3-220ENST00000487711 PKD1L2Q7Z442 2459 aa1.97□□□□□ -2.09
TTC3-220ENST00000487711 NYNRINQ9P2P1 1898 aaKnown RBP1.97□□□□□ -2.09
TTC3-220ENST00000487711 A0A087WXM4 84 aa1.97□□□□□ -2.09
TTC3-220ENST00000487711 IGKV3D-11A0A0A0MRZ8 115 aa1.97□□□□□ -2.09
TTC3-220ENST00000487711 LOC285095A0A1B0GVY8 99 aa1.97□□□□□ -2.09
TTC3-220ENST00000487711 PRAMEF26H0Y7S4 382 aa1.97□□□□□ -2.09
TTC3-220ENST00000487711 DNASE2O00115 360 aaPredicted RBP1.97□□□□□ -2.09
TTC3-220ENST00000487711 UBDO15205 165 aa1.97□□□□□ -2.09
TTC3-220ENST00000487711 RAD1O60671 282 aa1.97□□□□□ -2.09
TTC3-220ENST00000487711 BANF1O75531 89 aa1.97□□□□□ -2.09
TTC3-220ENST00000487711 UPK1BO75841 260 aa1.97□□□□□ -2.09
TTC3-220ENST00000487711 MYO1DO94832 1006 aa1.97□□□□□ -2.09
TTC3-220ENST00000487711 PTHP01270 115 aa1.97□□□□□ -2.09
TTC3-220ENST00000487711 IGLV3-27P01718 113 aa1.97□□□□□ -2.09
TTC3-220ENST00000487711 RPS17P08708 135 aaKnown RBP1.97□□□□□ -2.09
TTC3-220ENST00000487711 RD3LP0DJH9 198 aa1.97□□□□□ -2.09
TTC3-220ENST00000487711 SMIM10L2AP0DMW4 78 aa1.97□□□□□ -2.09
TTC3-220ENST00000487711 SMIM10L2BP0DMW5 78 aa1.97□□□□□ -2.09
TTC3-220ENST00000487711 ZNF35P13682 527 aa1.97□□□□□ -2.09
TTC3-220ENST00000487711 PSMB5P28074 263 aa1.97□□□□□ -2.09
TTC3-220ENST00000487711 RBM34P42696 430 aaKnown RBP1.97□□□□□ -2.09
TTC3-220ENST00000487711 RAB7AP51149 207 aa1.97□□□□□ -2.09
TTC3-220ENST00000487711 OR10A3P58181 314 aa1.97□□□□□ -2.09
TTC3-220ENST00000487711 TAS2R31P59538 309 aa1.97□□□□□ -2.09
TTC3-220ENST00000487711 GABARAPL2P60520 117 aa1.97□□□□□ -2.09
TTC3-220ENST00000487711 B2MP61769 119 aa1.97□□□□□ -2.09
TTC3-220ENST00000487711 RPL10AP62906 217 aaKnown RBP1.97□□□□□ -2.09
TTC3-220ENST00000487711 SLC35A1P78382 337 aa1.97□□□□□ -2.09
TTC3-220ENST00000487711 CD164Q04900 197 aa1.97□□□□□ -2.09
TTC3-220ENST00000487711 MGAT3Q09327 533 aa1.97□□□□□ -2.09
TTC3-220ENST00000487711 DMC1Q14565 340 aa1.97□□□□□ -2.09
TTC3-220ENST00000487711 ZNF266Q14584 549 aa1.97□□□□□ -2.09
TTC3-220ENST00000487711 OR1Q1Q15612 314 aa1.97□□□□□ -2.09
TTC3-220ENST00000487711 TOMM34Q15785 309 aaPredicted RBP1.97□□□□□ -2.09
TTC3-220ENST00000487711 TMEM249Q2WGJ8 235 aa1.97□□□□□ -2.09
TTC3-220ENST00000487711 UGT2A3Q6UWM9 527 aa1.97□□□□□ -2.09
TTC3-220ENST00000487711 CLEC18BQ6UXF7 455 aa1.97□□□□□ -2.09
TTC3-220ENST00000487711 FAM151BQ6UXP7 276 aa1.97□□□□□ -2.09
TTC3-220ENST00000487711 BRD3OSQ6XYD6 125 aa1.97□□□□□ -2.09
TTC3-220ENST00000487711 DEFB107AQ8IZN7 70 aa1.97□□□□□ -2.09
TTC3-220ENST00000487711 SPICQ8N5J4 248 aa1.97□□□□□ -2.09
TTC3-220ENST00000487711 COX18Q8N8Q8 333 aa1.97□□□□□ -2.09
TTC3-220ENST00000487711 C12orf29Q8N999 325 aa1.97□□□□□ -2.09
TTC3-220ENST00000487711 ACBD4Q8NC06 268 aa1.97□□□□□ -2.09
TTC3-220ENST00000487711 OR8J3Q8NGG0 315 aa1.97□□□□□ -2.09
TTC3-220ENST00000487711 OR10G6Q8NH81 332 aa1.97□□□□□ -2.09
TTC3-220ENST00000487711 STAG3L4Q8TBR4 150 aa1.97□□□□□ -2.09
TTC3-220ENST00000487711 SPPL2BQ8TCT7 592 aa1.97□□□□□ -2.09
TTC3-220ENST00000487711 DOK4Q8TEW6 326 aa1.97□□□□□ -2.09
TTC3-220ENST00000487711 NAT14Q8WUY8 206 aa1.97□□□□□ -2.09
TTC3-220ENST00000487711 DNAJB3Q8WWF6 145 aa1.97□□□□□ -2.09
TTC3-220ENST00000487711 WDR34Q96EX3 536 aa1.97□□□□□ -2.09
TTC3-220ENST00000487711 IMP4Q96G21 291 aaKnown RBP1.97□□□□□ -2.09
TTC3-220ENST00000487711 CCDC115Q96NT0 180 aa1.97□□□□□ -2.09
TTC3-220ENST00000487711 C9orf16Q9BUW7 83 aa1.97□□□□□ -2.09
TTC3-220ENST00000487711 ZNF426Q9BUY5 554 aa1.97□□□□□ -2.09
TTC3-220ENST00000487711 BEX2Q9BXY8 128 aa1.97□□□□□ -2.09
TTC3-220ENST00000487711 SAMD10Q9BYL1 202 aa1.97□□□□□ -2.09
TTC3-220ENST00000487711 ULBP1Q9BZM6 244 aa1.97□□□□□ -2.09
TTC3-220ENST00000487711 SHCBP1LQ9BZQ2 653 aa1.97□□□□□ -2.09
TTC3-220ENST00000487711 TRIM4Q9C037 500 aa1.97□□□□□ -2.09
TTC3-220ENST00000487711 DERL2Q9GZP9 239 aa1.97□□□□□ -2.09
TTC3-220ENST00000487711 GID8Q9NWU2 228 aa1.97□□□□□ -2.09
TTC3-220ENST00000487711 DDIT4Q9NX09 232 aa1.97□□□□□ -2.09
TTC3-220ENST00000487711 TAS2R13Q9NYV9 303 aa1.97□□□□□ -2.09
TTC3-220ENST00000487711 EMC3Q9P0I2 261 aa1.97□□□□□ -2.09
TTC3-220ENST00000487711 TMEM216Q9P0N5 145 aa1.97□□□□□ -2.09
TTC3-220ENST00000487711 FBXL3Q9UKT7 428 aa1.97□□□□□ -2.09
TTC3-220ENST00000487711 AP4S1Q9Y587 144 aa1.97□□□□□ -2.09
TTC3-220ENST00000487711 HSPE1-MOB4S4R3N1 261 aa1.97□□□□□ -2.09
TTC3-220ENST00000487711 ZNF638Q14966 1978 aaKnown RBP1.97□□□□□ -2.09
TTC3-220ENST00000487711 MYLKQ15746 1914 aa1.97□□□□□ -2.09
TTC3-220ENST00000487711 GOLGB1Q14789 3259 aaKnown RBP1.96□□□□□ -2.1
TTC3-220ENST00000487711 A0A0A6YYH2 397 aa1.96□□□□□ -2.1
TTC3-220ENST00000487711 CCL15-CCL14A0A0B4J2E2 113 aa1.96□□□□□ -2.1
TTC3-220ENST00000487711 IGKV1-8A0A0C4DH67 115 aa1.96□□□□□ -2.1
TTC3-220ENST00000487711 KIR2DS1A0A191URI9 304 aa1.96□□□□□ -2.1
TTC3-220ENST00000487711 A6NJ64 397 aa1.96□□□□□ -2.1
TTC3-220ENST00000487711 A8MT66 165 aa1.96□□□□□ -2.1
TTC3-220ENST00000487711 PSMD12O00232 456 aaPredicted RBP1.96□□□□□ -2.1
TTC3-220ENST00000487711 TAAR5O14804 337 aa1.96□□□□□ -2.1
TTC3-220ENST00000487711 AZIN1O14977 448 aa1.96□□□□□ -2.1
TTC3-220ENST00000487711 SLC31A1O15431 190 aa1.96□□□□□ -2.1
TTC3-220ENST00000487711 CRXO43186 299 aaPredicted RBP1.96□□□□□ -2.1
TTC3-220ENST00000487711 SLC22A5O76082 557 aa1.96□□□□□ -2.1
TTC3-220ENST00000487711 SLC35G6P0C7Q6 338 aa1.96□□□□□ -2.1
TTC3-220ENST00000487711 RPS3P23396 243 aaKnown RBP eCLIP1.96□□□□□ -2.1
TTC3-220ENST00000487711 CXCR1P25024 350 aa1.96□□□□□ -2.1
TTC3-220ENST00000487711 HOXA6P31267 233 aa1.96□□□□□ -2.1
TTC3-220ENST00000487711 CD70P32970 193 aa1.96□□□□□ -2.1
TTC3-220ENST00000487711 TTPAP49638 278 aa1.96□□□□□ -2.1
TTC3-220ENST00000487711 NUDT2P50583 147 aa1.96□□□□□ -2.1
TTC3-220ENST00000487711 CDK9P50750 372 aaKnown RBP1.96□□□□□ -2.1
TTC3-220ENST00000487711 STC1P52823 247 aa1.96□□□□□ -2.1
TTC3-220ENST00000487711 AQP4P55087 323 aa1.96□□□□□ -2.1
TTC3-220ENST00000487711 OR12D2P58182 307 aa1.96□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms