RNA–Protein interactions for RNA: ENST00000487645.1

COL4A6-207, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 3

Gene COL4A6, Length 812 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-207ENST00000487645 CT45A3Q8NHU0 189 aa10.8□□□□□ -0.68
COL4A6-207ENST00000487645 C22orf15Q8WYQ4 148 aa10.8□□□□□ -0.68
COL4A6-207ENST00000487645 GHITMQ9H3K2 345 aa10.8□□□□□ -0.68
COL4A6-207ENST00000487645 SETD2Q9BYW2 2564 aaPredicted RBP10.8□□□□□ -0.68
COL4A6-207ENST00000487645 A0A0A6YYJ9 748 aa10.79□□□□□ -0.68
COL4A6-207ENST00000487645 MEIS3P1A6NDR6 274 aa10.79□□□□□ -0.68
COL4A6-207ENST00000487645 OOSP1A8MZH6 123 aa10.79□□□□□ -0.68
COL4A6-207ENST00000487645 BET1O15155 118 aa10.79□□□□□ -0.68
COL4A6-207ENST00000487645 RCVRNP35243 200 aa10.79□□□□□ -0.68
COL4A6-207ENST00000487645 GNG10P50151 68 aa10.79□□□□□ -0.68
COL4A6-207ENST00000487645 SSBP1Q04837 148 aaKnown RBP10.79□□□□□ -0.68
COL4A6-207ENST00000487645 MADCAM1Q13477 382 aa10.79□□□□□ -0.68
COL4A6-207ENST00000487645 DEFB112Q30KQ8 113 aa10.79□□□□□ -0.68
COL4A6-207ENST00000487645 SPANXN2Q5MJ10 180 aa10.79□□□□□ -0.68
COL4A6-207ENST00000487645 FAM131AQ6UXB0 335 aa10.79□□□□□ -0.68
COL4A6-207ENST00000487645 Q6YL49 198 aa10.79□□□□□ -0.68
COL4A6-207ENST00000487645 LHFPL4Q7Z7J7 247 aa10.79□□□□□ -0.68
COL4A6-207ENST00000487645 LYSMD2Q8IV50 215 aa10.79□□□□□ -0.68
COL4A6-207ENST00000487645 OR5AP2Q8NGF4 316 aa10.79□□□□□ -0.68
COL4A6-207ENST00000487645 OR10X1Q8NGY0 326 aa10.79□□□□□ -0.68
COL4A6-207ENST00000487645 OR52I2Q8NH67 350 aa10.79□□□□□ -0.68
COL4A6-207ENST00000487645 ZNF418Q8TF45 676 aaPredicted RBP10.79□□□□□ -0.68
COL4A6-207ENST00000487645 FAM216AQ8WUB2 273 aa10.79□□□□□ -0.68
COL4A6-207ENST00000487645 EDARADDQ8WWZ3 215 aa10.79□□□□□ -0.68
COL4A6-207ENST00000487645 GCDHQ92947 438 aaPredicted RBP10.79□□□□□ -0.68
COL4A6-207ENST00000487645 SLC6A7Q99884 636 aa10.79□□□□□ -0.68
COL4A6-207ENST00000487645 OCEL1Q9H607 264 aa10.79□□□□□ -0.68
COL4A6-207ENST00000487645 OR1A1Q9P1Q5 309 aa10.79□□□□□ -0.68
COL4A6-207ENST00000487645 MTFP1Q9UDX5 166 aa10.79□□□□□ -0.68
COL4A6-207ENST00000487645 SOX21Q9Y651 276 aaPredicted RBP10.79□□□□□ -0.68
COL4A6-207ENST00000487645 GSTZ1O43708 216 aaPredicted RBP10.78□□□□□ -0.68
COL4A6-207ENST00000487645 IFNA2P01563 188 aa10.78□□□□□ -0.68
COL4A6-207ENST00000487645 IL3RAP26951 378 aa10.78□□□□□ -0.68
COL4A6-207ENST00000487645 RAB7AP51149 207 aa10.78□□□□□ -0.68
COL4A6-207ENST00000487645 ZNF137PP52743 207 aa10.78□□□□□ -0.68
COL4A6-207ENST00000487645 TAS2R46P59540 309 aa10.78□□□□□ -0.68
COL4A6-207ENST00000487645 ARPC4P59998 168 aa10.78□□□□□ -0.68
COL4A6-207ENST00000487645 ACTBP60709 375 aa10.78□□□□□ -0.68
COL4A6-207ENST00000487645 ACTG1P63261 375 aa10.78□□□□□ -0.68
COL4A6-207ENST00000487645 CDK10Q15131 360 aa10.78□□□□□ -0.68
COL4A6-207ENST00000487645 AANATQ16613 207 aa10.78□□□□□ -0.68
COL4A6-207ENST00000487645 LDLRAD2Q5SZI1 272 aa10.78□□□□□ -0.68
COL4A6-207ENST00000487645 RBMS3Q6XE24 437 aaKnown RBP10.78□□□□□ -0.68
COL4A6-207ENST00000487645 OR2AK2Q8NG84 335 aa10.78□□□□□ -0.68
COL4A6-207ENST00000487645 C17orf50Q8WW18 174 aa10.78□□□□□ -0.68
COL4A6-207ENST00000487645 SNAPC3Q92966 411 aa10.78□□□□□ -0.68
COL4A6-207ENST00000487645 ZDHHC16Q969W1 377 aa10.78□□□□□ -0.68
COL4A6-207ENST00000487645 ZNF48Q96MX3 618 aaPredicted RBP10.78□□□□□ -0.68
COL4A6-207ENST00000487645 GINS4Q9BRT9 223 aa10.78□□□□□ -0.68
COL4A6-207ENST00000487645 ABHD14AQ9BUJ0 271 aa10.78□□□□□ -0.68
COL4A6-207ENST00000487645 C11orf54Q9H0W9 315 aaPredicted RBP10.78□□□□□ -0.68
COL4A6-207ENST00000487645 NECAP2Q9NVZ3 263 aa10.78□□□□□ -0.68
COL4A6-207ENST00000487645 RDH8Q9NYR8 311 aa10.78□□□□□ -0.68
COL4A6-207ENST00000487645 PTTG2Q9NZH5 202 aa10.78□□□□□ -0.68
COL4A6-207ENST00000487645 KLK11Q9UBX7 282 aa10.78□□□□□ -0.68
COL4A6-207ENST00000487645 NF1P21359 2839 aa10.78□□□□□ -0.68
COL4A6-207ENST00000487645 A0A1W2PPE3 182 aa10.77□□□□□ -0.69
COL4A6-207ENST00000487645 VGLL3A8MV65 326 aa10.77□□□□□ -0.69
COL4A6-207ENST00000487645 SLC31A2O15432 143 aa10.77□□□□□ -0.69
COL4A6-207ENST00000487645 OR3A3P47888 321 aa10.77□□□□□ -0.69
COL4A6-207ENST00000487645 SSX2Q16385 188 aa10.77□□□□□ -0.69
COL4A6-207ENST00000487645 TPTE2P1Q5T6R2 138 aa10.77□□□□□ -0.69
COL4A6-207ENST00000487645 CCDC144NLQ6NUI1 221 aa10.77□□□□□ -0.69
COL4A6-207ENST00000487645 LDLRAD3Q86YD5 345 aa10.77□□□□□ -0.69
COL4A6-207ENST00000487645 H1FOOQ8IZA3 346 aaPredicted RBP10.77□□□□□ -0.69
COL4A6-207ENST00000487645 SIGLECL1Q8N7X8 197 aa10.77□□□□□ -0.69
COL4A6-207ENST00000487645 SMIM4Q8WVI0 70 aa10.77□□□□□ -0.69
COL4A6-207ENST00000487645 ST6GALNAC6Q969X2 333 aa10.77□□□□□ -0.69
COL4A6-207ENST00000487645 JMJD8Q96S16 334 aa10.77□□□□□ -0.69
COL4A6-207ENST00000487645 AGMATQ9BSE5 352 aa10.77□□□□□ -0.69
COL4A6-207ENST00000487645 PIPOXQ9P0Z9 390 aa10.77□□□□□ -0.69
COL4A6-207ENST00000487645 ZNRD1Q9P1U0 126 aa10.77□□□□□ -0.69
COL4A6-207ENST00000487645 ZNF107Q9UII5 783 aaPredicted RBP10.77□□□□□ -0.69
COL4A6-207ENST00000487645 HILPDAQ9Y5L2 63 aa10.77□□□□□ -0.69
COL4A6-207ENST00000487645 V9GYH0 126 aa10.77□□□□□ -0.69
COL4A6-207ENST00000487645 ZFHX3Q15911 3703 aa10.76□□□□□ -0.69
COL4A6-207ENST00000487645 RAB29O14966 203 aa10.76□□□□□ -0.69
COL4A6-207ENST00000487645 GAPDHP04406 335 aaKnown RBP10.76□□□□□ -0.69
COL4A6-207ENST00000487645 OR5H8P0DN80 308 aa10.76□□□□□ -0.69
COL4A6-207ENST00000487645 IER3P46695 156 aa10.76□□□□□ -0.69
COL4A6-207ENST00000487645 DYNLT3P51808 116 aa10.76□□□□□ -0.69
COL4A6-207ENST00000487645 ARHGDIBP52566 201 aa10.76□□□□□ -0.69
COL4A6-207ENST00000487645 DGCR2P98153 550 aa10.76□□□□□ -0.69
COL4A6-207ENST00000487645 ZNF45Q02386 682 aa10.76□□□□□ -0.69
COL4A6-207ENST00000487645 ZNF816Q0VGE8 651 aaPredicted RBP10.76□□□□□ -0.69
COL4A6-207ENST00000487645 PYDC2Q56P42 97 aa10.76□□□□□ -0.69
COL4A6-207ENST00000487645 DHRS11Q6UWP2 260 aa10.76□□□□□ -0.69
COL4A6-207ENST00000487645 OVCH2Q7RTZ1 564 aa10.76□□□□□ -0.69
COL4A6-207ENST00000487645 LYG1Q8N1E2 194 aa10.76□□□□□ -0.69
COL4A6-207ENST00000487645 DYNAPQ8N1N2 210 aa10.76□□□□□ -0.69
COL4A6-207ENST00000487645 OR5H2Q8NGV7 314 aa10.76□□□□□ -0.69
COL4A6-207ENST00000487645 GIMAP1Q8WWP7 306 aa10.76□□□□□ -0.69
COL4A6-207ENST00000487645 RPEQ96AT9 228 aa10.76□□□□□ -0.69
COL4A6-207ENST00000487645 DPAGT1Q9H3H5 408 aa10.76□□□□□ -0.69
COL4A6-207ENST00000487645 TAS2R8Q9NYW2 309 aa10.76□□□□□ -0.69
COL4A6-207ENST00000487645 GAB2Q9UQC2 676 aa10.76□□□□□ -0.69
COL4A6-207ENST00000487645 RBMX2Q9Y388 322 aaKnown RBP10.76□□□□□ -0.69
COL4A6-207ENST00000487645 MDFIC2A0A1B0GVS7 189 aa10.75□□□□□ -0.69
COL4A6-207ENST00000487645 TCF21O43680 179 aa10.75□□□□□ -0.69
COL4A6-207ENST00000487645 LANCL1O43813 399 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms