RNA–Protein interactions for RNA: ENST00000487029.1

SNRNP27-204, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 3

Gene SNRNP27, Length 604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-204ENST00000487029 MLNP12872 115 aa1.88□□□□□ -2.11
SNRNP27-204ENST00000487029 HLA-GP17693 338 aa1.88□□□□□ -2.11
SNRNP27-204ENST00000487029 SPI1P17947 270 aa1.88□□□□□ -2.11
SNRNP27-204ENST00000487029 PVALBP20472 110 aaPredicted RBP1.88□□□□□ -2.11
SNRNP27-204ENST00000487029 HLA-DMAP28067 261 aa1.88□□□□□ -2.11
SNRNP27-204ENST00000487029 S100A2P29034 98 aa1.88□□□□□ -2.11
SNRNP27-204ENST00000487029 CRABP1P29762 137 aa1.88□□□□□ -2.11
SNRNP27-204ENST00000487029 DYNLL1P63167 89 aaKnown RBP1.88□□□□□ -2.11
SNRNP27-204ENST00000487029 EIF5AP63241 154 aaKnown RBP1.88□□□□□ -2.11
SNRNP27-204ENST00000487029 REEP5Q00765 189 aa1.88□□□□□ -2.11
SNRNP27-204ENST00000487029 PRKCDQ05655 676 aa1.88□□□□□ -2.11
SNRNP27-204ENST00000487029 TOMM34Q15785 309 aaPredicted RBP1.88□□□□□ -2.11
SNRNP27-204ENST00000487029 USF2Q15853 346 aaPredicted RBP1.88□□□□□ -2.11
SNRNP27-204ENST00000487029 SP6Q3SY56 376 aa1.88□□□□□ -2.11
SNRNP27-204ENST00000487029 CDKL4Q5MAI5 379 aa1.88□□□□□ -2.11
SNRNP27-204ENST00000487029 KPRPQ5T749 579 aaPredicted RBP1.88□□□□□ -2.11
SNRNP27-204ENST00000487029 LIN9Q5TKA1 542 aa1.88□□□□□ -2.11
SNRNP27-204ENST00000487029 EIF5AL1Q6IS14 154 aaKnown RBP1.88□□□□□ -2.11
SNRNP27-204ENST00000487029 HAGHLQ6PII5 290 aaPredicted RBP1.88□□□□□ -2.11
SNRNP27-204ENST00000487029 PID1Q7Z2X4 250 aa1.88□□□□□ -2.11
SNRNP27-204ENST00000487029 DCXRQ7Z4W1 244 aa1.88□□□□□ -2.11
SNRNP27-204ENST00000487029 PDPNQ86YL7 162 aa1.88□□□□□ -2.11
SNRNP27-204ENST00000487029 SLC13A5Q86YT5 568 aaPredicted RBP1.88□□□□□ -2.11
SNRNP27-204ENST00000487029 C12orf45Q8N5I9 185 aaPredicted RBP1.88□□□□□ -2.11
SNRNP27-204ENST00000487029 ZNF283Q8N7M2 679 aa1.88□□□□□ -2.11
SNRNP27-204ENST00000487029 SLC26A10Q8NG04 563 aa1.88□□□□□ -2.11
SNRNP27-204ENST00000487029 MCFD2Q8NI22 146 aa1.88□□□□□ -2.11
SNRNP27-204ENST00000487029 ORAOV1Q8WV07 137 aa1.88□□□□□ -2.11
SNRNP27-204ENST00000487029 CACNG8Q8WXS5 425 aa1.88□□□□□ -2.11
SNRNP27-204ENST00000487029 RORBQ92753 470 aa1.88□□□□□ -2.11
SNRNP27-204ENST00000487029 OTUB2Q96DC9 234 aa1.88□□□□□ -2.11
SNRNP27-204ENST00000487029 ZHX1-C8orf76Q96EF9 292 aa1.88□□□□□ -2.11
SNRNP27-204ENST00000487029 GLT1D1Q96MS3 346 aa1.88□□□□□ -2.11
SNRNP27-204ENST00000487029 AIF1LQ9BQI0 150 aa1.88□□□□□ -2.11
SNRNP27-204ENST00000487029 UTP23Q9BRU9 249 aaKnown RBP1.88□□□□□ -2.11
SNRNP27-204ENST00000487029 ZNF649Q9BS31 505 aa1.88□□□□□ -2.11
SNRNP27-204ENST00000487029 TMED9Q9BVK6 235 aa1.88□□□□□ -2.11
SNRNP27-204ENST00000487029 ZNF436Q9C0F3 470 aaPredicted RBP1.88□□□□□ -2.11
SNRNP27-204ENST00000487029 TREM1Q9NP99 234 aa1.88□□□□□ -2.11
SNRNP27-204ENST00000487029 NIT2Q9NQR4 276 aa1.88□□□□□ -2.11
SNRNP27-204ENST00000487029 MED9Q9NWA0 146 aa1.88□□□□□ -2.11
SNRNP27-204ENST00000487029 SCN3BQ9NY72 215 aa1.88□□□□□ -2.11
SNRNP27-204ENST00000487029 USE1Q9NZ43 259 aa1.88□□□□□ -2.11
SNRNP27-204ENST00000487029 SSR3Q9UNL2 185 aa1.88□□□□□ -2.11
SNRNP27-204ENST00000487029 POMPQ9Y244 141 aa1.88□□□□□ -2.11
SNRNP27-204ENST00000487029 TPRKBQ9Y3C4 175 aa1.88□□□□□ -2.11
SNRNP27-204ENST00000487029 HSPE1-MOB4S4R3N1 261 aa1.88□□□□□ -2.11
SNRNP27-204ENST00000487029 RIC1Q4ADV7 1423 aa1.88□□□□□ -2.11
SNRNP27-204ENST00000487029 SPHKAPQ2M3C7 1700 aa1.88□□□□□ -2.11
SNRNP27-204ENST00000487029 TRPM3Q9HCF6 1732 aaPredicted RBP1.88□□□□□ -2.11
SNRNP27-204ENST00000487029 PARP4Q9UKK3 1724 aaKnown RBP1.88□□□□□ -2.11
SNRNP27-204ENST00000487029 CRYBG1Q9Y4K1 1723 aa1.88□□□□□ -2.11
SNRNP27-204ENST00000487029 NID2Q14112 1375 aa1.87□□□□□ -2.11
SNRNP27-204ENST00000487029 BRWD3Q6RI45 1802 aa1.87□□□□□ -2.11
SNRNP27-204ENST00000487029 MYH9P35579 1960 aaKnown RBP1.87□□□□□ -2.11
SNRNP27-204ENST00000487029 TRAPPC13A5PLN9 417 aa1.87□□□□□ -2.11
SNRNP27-204ENST00000487029 TVP23AA6NH52 213 aa1.87□□□□□ -2.11
SNRNP27-204ENST00000487029 RFPL4AA6NLU0 287 aa1.87□□□□□ -2.11
SNRNP27-204ENST00000487029 E7EWF7 191 aa1.87□□□□□ -2.11
SNRNP27-204ENST00000487029 RFPL4AL1F8VTS6 287 aa1.87□□□□□ -2.11
SNRNP27-204ENST00000487029 ZNF593O00488 134 aaPredicted RBP1.87□□□□□ -2.11
SNRNP27-204ENST00000487029 COPEO14579 308 aa1.87□□□□□ -2.11
SNRNP27-204ENST00000487029 ZNF609O15014 1411 aa1.87□□□□□ -2.11
SNRNP27-204ENST00000487029 TPST1O60507 370 aa1.87□□□□□ -2.11
SNRNP27-204ENST00000487029 UGT2B11O75310 529 aa1.87□□□□□ -2.11
SNRNP27-204ENST00000487029 OR4Q2P0C623 313 aa1.87□□□□□ -2.11
SNRNP27-204ENST00000487029 LIPCP11150 499 aa1.87□□□□□ -2.11
SNRNP27-204ENST00000487029 SLC2A1P11166 492 aa1.87□□□□□ -2.11
SNRNP27-204ENST00000487029 IFI30P13284 250 aa1.87□□□□□ -2.11
SNRNP27-204ENST00000487029 BGNP21810 368 aa1.87□□□□□ -2.11
SNRNP27-204ENST00000487029 CA5AP35218 305 aa1.87□□□□□ -2.11
SNRNP27-204ENST00000487029 ETV6P41212 452 aa1.87□□□□□ -2.11
SNRNP27-204ENST00000487029 P2RY2P41231 377 aa1.87□□□□□ -2.11
SNRNP27-204ENST00000487029 MAGEA3P43357 314 aa1.87□□□□□ -2.11
SNRNP27-204ENST00000487029 RBP2P50120 134 aa1.87□□□□□ -2.11
SNRNP27-204ENST00000487029 ATP5J2P56134 94 aa1.87□□□□□ -2.11
SNRNP27-204ENST00000487029 PSME3P61289 254 aa1.87□□□□□ -2.11
SNRNP27-204ENST00000487029 RBX1P62877 108 aa1.87□□□□□ -2.11
SNRNP27-204ENST00000487029 VAMP3Q15836 100 aa1.87□□□□□ -2.11
SNRNP27-204ENST00000487029 NEDD8Q15843 81 aa1.87□□□□□ -2.11
SNRNP27-204ENST00000487029 ZNF404Q494X3 552 aa1.87□□□□□ -2.11
SNRNP27-204ENST00000487029 RNASE10Q5GAN6 216 aaKnown RBP1.87□□□□□ -2.11
SNRNP27-204ENST00000487029 ZNF678Q5SXM1 525 aa1.87□□□□□ -2.11
SNRNP27-204ENST00000487029 IDNKQ5T6J7 187 aa1.87□□□□□ -2.11
SNRNP27-204ENST00000487029 SYT6Q5T7P8 510 aaPredicted RBP1.87□□□□□ -2.11
SNRNP27-204ENST00000487029 FAM45BPQ6NSW5 357 aa1.87□□□□□ -2.11
SNRNP27-204ENST00000487029 WDR59Q6PJI9 974 aa1.87□□□□□ -2.11
SNRNP27-204ENST00000487029 TEX261Q6UWH6 196 aa1.87□□□□□ -2.11
SNRNP27-204ENST00000487029 CLEC19AQ6UXS0 136 aa1.87□□□□□ -2.11
SNRNP27-204ENST00000487029 C10orf71Q711Q0 1435 aa1.87□□□□□ -2.11
SNRNP27-204ENST00000487029 KNDC1Q76NI1 1749 aa1.87□□□□□ -2.11
SNRNP27-204ENST00000487029 DHFR2Q86XF0 187 aa1.87□□□□□ -2.11
SNRNP27-204ENST00000487029 DEFB107AQ8IZN7 70 aa1.87□□□□□ -2.11
SNRNP27-204ENST00000487029 C4orf33Q8N1A6 199 aa1.87□□□□□ -2.11
SNRNP27-204ENST00000487029 SYS1Q8N2H4 156 aa1.87□□□□□ -2.11
SNRNP27-204ENST00000487029 SVBPQ8N300 66 aa1.87□□□□□ -2.11
SNRNP27-204ENST00000487029 EIF4E3Q8N5X7 224 aaKnown RBP1.87□□□□□ -2.11
SNRNP27-204ENST00000487029 TERB2Q8NHR7 220 aa1.87□□□□□ -2.11
SNRNP27-204ENST00000487029 DTD1Q8TEA8 209 aa1.87□□□□□ -2.11
SNRNP27-204ENST00000487029 ZNF431Q8TF32 576 aaPredicted RBP1.87□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms