RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 JPT1Q9UK76 154 aa19.21■□□□□ 0.67
LIME1-206ENST00000487026 IGHG4P01861 327 aa19.2■□□□□ 0.66
LIME1-206ENST00000487026 UBBP0CG47 229 aa19.2■□□□□ 0.66
LIME1-206ENST00000487026 ACTBP60709 375 aa19.2■□□□□ 0.66
LIME1-206ENST00000487026 RPS27AP62979 156 aaKnown RBP19.2■□□□□ 0.66
LIME1-206ENST00000487026 C1orf100Q5SVJ3 147 aa19.2■□□□□ 0.66
LIME1-206ENST00000487026 GLT8D1Q68CQ7 371 aa19.2■□□□□ 0.66
LIME1-206ENST00000487026 CEACAM19Q7Z692 300 aa19.2■□□□□ 0.66
LIME1-206ENST00000487026 ZNF554Q86TJ5 538 aa19.2■□□□□ 0.66
LIME1-206ENST00000487026 OR8U1Q8NH10 309 aa19.2■□□□□ 0.66
LIME1-206ENST00000487026 GALMQ96C23 342 aa19.2■□□□□ 0.66
LIME1-206ENST00000487026 NABP2Q9BQ15 211 aa19.2■□□□□ 0.66
LIME1-206ENST00000487026 NICN1Q9BSH3 213 aa19.2■□□□□ 0.66
LIME1-206ENST00000487026 YPEL1O60688 119 aa19.19■□□□□ 0.66
LIME1-206ENST00000487026 IGF1P05019 195 aa19.19■□□□□ 0.66
LIME1-206ENST00000487026 SRMP19623 302 aa19.19■□□□□ 0.66
LIME1-206ENST00000487026 LUMP51884 338 aaPredicted RBP19.19■□□□□ 0.66
LIME1-206ENST00000487026 YPEL2Q96QA6 119 aa19.19■□□□□ 0.66
LIME1-206ENST00000487026 TMEM59Q9BXS4 323 aa19.19■□□□□ 0.66
LIME1-206ENST00000487026 LSM2Q9Y333 95 aaKnown RBP19.19■□□□□ 0.66
LIME1-206ENST00000487026 WSB1Q9Y6I7 421 aa19.19■□□□□ 0.66
LIME1-206ENST00000487026 DGCR2P98153 550 aa19.18■□□□□ 0.66
LIME1-206ENST00000487026 CD69Q07108 199 aa19.18■□□□□ 0.66
LIME1-206ENST00000487026 UNC119Q13432 240 aa19.18■□□□□ 0.66
LIME1-206ENST00000487026 SPHARQ15513 63 aa19.18■□□□□ 0.66
LIME1-206ENST00000487026 MED22Q15528 200 aa19.18■□□□□ 0.66
LIME1-206ENST00000487026 HMGN3Q15651 99 aa19.18■□□□□ 0.66
LIME1-206ENST00000487026 RNLSQ5VYX0 342 aa19.18■□□□□ 0.66
LIME1-206ENST00000487026 IL1F10Q8WWZ1 152 aa19.18■□□□□ 0.66
LIME1-206ENST00000487026 PHYHIPQ92561 330 aa19.18■□□□□ 0.66
LIME1-206ENST00000487026 G3V318 75 aa19.17■□□□□ 0.66
LIME1-206ENST00000487026 RGS11O94810 467 aa19.17■□□□□ 0.66
LIME1-206ENST00000487026 PSMB8P28062 276 aa19.17■□□□□ 0.66
LIME1-206ENST00000487026 HSD17B12Q53GQ0 312 aa19.17■□□□□ 0.66
LIME1-206ENST00000487026 ZNF833PQ6ZTB9 187 aa19.17■□□□□ 0.66
LIME1-206ENST00000487026 OR2AK2Q8NG84 335 aa19.17■□□□□ 0.66
LIME1-206ENST00000487026 KCNG3Q8TAE7 436 aa19.17■□□□□ 0.66
LIME1-206ENST00000487026 SETD6Q8TBK2 473 aa19.17■□□□□ 0.66
LIME1-206ENST00000487026 TMEM203Q969S6 136 aa19.17■□□□□ 0.66
LIME1-206ENST00000487026 ZNF251Q9BRH9 671 aa19.17■□□□□ 0.66
LIME1-206ENST00000487026 KLK15Q9H2R5 256 aa19.17■□□□□ 0.66
LIME1-206ENST00000487026 LRRC42Q9Y546 428 aa19.17■□□□□ 0.66
LIME1-206ENST00000487026 SAA2-SAA4A0A096LPE2 208 aa19.16■□□□□ 0.66
LIME1-206ENST00000487026 A0A0A6YYD4 124 aa19.16■□□□□ 0.66
LIME1-206ENST00000487026 ST8SIA5O15466 376 aa19.16■□□□□ 0.66
LIME1-206ENST00000487026 SAA2P0DJI9 122 aaPredicted RBP19.16■□□□□ 0.66
LIME1-206ENST00000487026 BLVRBP30043 206 aaPredicted RBP19.16■□□□□ 0.66
LIME1-206ENST00000487026 LIPKQ5VXJ0 399 aa19.16■□□□□ 0.66
LIME1-206ENST00000487026 OR5M8Q8NGP6 311 aa19.16■□□□□ 0.66
LIME1-206ENST00000487026 ANKRD60Q9BZ19 345 aa19.16■□□□□ 0.66
LIME1-206ENST00000487026 VCXQ9H320 206 aa19.16■□□□□ 0.66
LIME1-206ENST00000487026 CHMP1AQ9HD42 196 aaPredicted RBP19.16■□□□□ 0.66
LIME1-206ENST00000487026 PARP11Q9NR21 331 aa19.16■□□□□ 0.66
LIME1-206ENST00000487026 ABRACLQ9P1F3 81 aa19.16■□□□□ 0.66
LIME1-206ENST00000487026 NKX1-2Q9UD57 310 aaPredicted RBP19.16■□□□□ 0.66
LIME1-206ENST00000487026 SLC22A1O15245 554 aa19.15■□□□□ 0.66
LIME1-206ENST00000487026 QRFPP83859 136 aa19.15■□□□□ 0.66
LIME1-206ENST00000487026 LY6G6FQ5SQ64 297 aa19.15■□□□□ 0.66
LIME1-206ENST00000487026 SVOPQ8N4V2 548 aa19.15■□□□□ 0.66
LIME1-206ENST00000487026 C4orf3Q8WVX3 66 aa19.15■□□□□ 0.66
LIME1-206ENST00000487026 B9D2Q9BPU9 175 aa19.15■□□□□ 0.66
LIME1-206ENST00000487026 TM2D1Q9BX74 207 aa19.15■□□□□ 0.66
LIME1-206ENST00000487026 IFI27L2Q9H2X8 130 aa19.15■□□□□ 0.66
LIME1-206ENST00000487026 OR51J1Q9H342 316 aa19.15■□□□□ 0.66
LIME1-206ENST00000487026 PLEKHJ1Q9NW61 149 aa19.15■□□□□ 0.66
LIME1-206ENST00000487026 SCN3BQ9NY72 215 aa19.15■□□□□ 0.66
LIME1-206ENST00000487026 IGHV7-81A0A0B4J1V7 117 aa19.14■□□□□ 0.65
LIME1-206ENST00000487026 TMEM14DPA8MWL7 114 aa19.14■□□□□ 0.65
LIME1-206ENST00000487026 ATP6V0E1O15342 81 aa19.14■□□□□ 0.65
LIME1-206ENST00000487026 NBR2O15453 112 aa19.14■□□□□ 0.65
LIME1-206ENST00000487026 NAPSAO96009 420 aa19.14■□□□□ 0.65
LIME1-206ENST00000487026 UCHL1P09936 223 aa19.14■□□□□ 0.65
LIME1-206ENST00000487026 OR5H8P0DN80 308 aa19.14■□□□□ 0.65
LIME1-206ENST00000487026 PPIFP30405 207 aaKnown RBP19.14■□□□□ 0.65
LIME1-206ENST00000487026 P2RY14Q15391 338 aa19.14■□□□□ 0.65
LIME1-206ENST00000487026 C5orf64Q2M2E5 130 aa19.14■□□□□ 0.65
LIME1-206ENST00000487026 OR11H1Q8NG94 326 aa19.14■□□□□ 0.65
LIME1-206ENST00000487026 PARP12Q9H0J9 701 aaKnown RBP19.14■□□□□ 0.65
LIME1-206ENST00000487026 STEAP1Q9UHE8 339 aa19.14■□□□□ 0.65
LIME1-206ENST00000487026 ZNF580Q9UK33 172 aa19.14■□□□□ 0.65
LIME1-206ENST00000487026 SOCS1O15524 211 aa19.13■□□□□ 0.65
LIME1-206ENST00000487026 HLA-DRB1P01911 266 aa19.13■□□□□ 0.65
LIME1-206ENST00000487026 CD37P11049 281 aa19.13■□□□□ 0.65
LIME1-206ENST00000487026 KIAA0141Q14154 515 aaPredicted RBP19.13■□□□□ 0.65
LIME1-206ENST00000487026 IRF3Q14653 427 aa19.13■□□□□ 0.65
LIME1-206ENST00000487026 RPL39P5Q59GN2 51 aa19.13■□□□□ 0.65
LIME1-206ENST00000487026 LIN54Q6MZP7 749 aa19.13■□□□□ 0.65
LIME1-206ENST00000487026 ZNF880Q6PDB4 577 aa19.13■□□□□ 0.65
LIME1-206ENST00000487026 TMEM65Q6PI78 240 aa19.13■□□□□ 0.65
LIME1-206ENST00000487026 OR5B12Q96R08 314 aa19.13■□□□□ 0.65
LIME1-206ENST00000487026 PRR25Q96S07 402 aa19.13■□□□□ 0.65
LIME1-206ENST00000487026 GFI1Q99684 422 aa19.13■□□□□ 0.65
LIME1-206ENST00000487026 HDHD3Q9BSH5 251 aaPredicted RBP19.13■□□□□ 0.65
LIME1-206ENST00000487026 GNB4Q9HAV0 340 aa19.13■□□□□ 0.65
LIME1-206ENST00000487026 ZMAT5Q9UDW3 170 aaKnown RBP19.13■□□□□ 0.65
LIME1-206ENST00000487026 SEC14L6B5MCN3 397 aa19.12■□□□□ 0.65
LIME1-206ENST00000487026 BPNT1O95861 308 aa19.12■□□□□ 0.65
LIME1-206ENST00000487026 C9orf66Q5T8R8 295 aa19.12■□□□□ 0.65
LIME1-206ENST00000487026 FAM131AQ6UXB0 335 aa19.12■□□□□ 0.65
LIME1-206ENST00000487026 GLDNQ6ZMI3 551 aaPredicted RBP19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms