RNA–Protein interactions for RNA: ENST00000486618.1

HDAC3-209, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-209ENST00000486618 SERPINE1P05121 402 aa5.6□□□□□ -1.51
HDAC3-209ENST00000486618 GYPEP15421 78 aa5.6□□□□□ -1.51
HDAC3-209ENST00000486618 GZMHP20718 246 aa5.6□□□□□ -1.51
HDAC3-209ENST00000486618 HTR1FP30939 366 aa5.6□□□□□ -1.51
HDAC3-209ENST00000486618 GUCA1AP43080 201 aaPredicted RBP5.6□□□□□ -1.51
HDAC3-209ENST00000486618 WNT4P56705 351 aa5.6□□□□□ -1.51
HDAC3-209ENST00000486618 RAB25P57735 213 aa5.6□□□□□ -1.51
HDAC3-209ENST00000486618 ABCE1P61221 599 aaKnown RBP5.6□□□□□ -1.51
HDAC3-209ENST00000486618 SNRPEP62304 92 aaKnown RBP5.6□□□□□ -1.51
HDAC3-209ENST00000486618 SRSF4Q08170 494 aaKnown RBP5.6□□□□□ -1.51
HDAC3-209ENST00000486618 KIAA0141Q14154 515 aaPredicted RBP5.6□□□□□ -1.51
HDAC3-209ENST00000486618 ZNF718Q3SXZ3 478 aa5.6□□□□□ -1.51
HDAC3-209ENST00000486618 HSD17B12Q53GQ0 312 aa5.6□□□□□ -1.51
HDAC3-209ENST00000486618 SLC27A4Q6P1M0 643 aa5.6□□□□□ -1.51
HDAC3-209ENST00000486618 C9orf139Q6ZV77 190 aa5.6□□□□□ -1.51
HDAC3-209ENST00000486618 ZNF767PQ75MW2 155 aa5.6□□□□□ -1.51
HDAC3-209ENST00000486618 CROCCP2Q86T23 111 aa5.6□□□□□ -1.51
HDAC3-209ENST00000486618 NIT1Q86X76 327 aa5.6□□□□□ -1.51
HDAC3-209ENST00000486618 SLC22A24Q8N4F4 322 aa5.6□□□□□ -1.51
HDAC3-209ENST00000486618 GCSAMQ8N6F7 178 aa5.6□□□□□ -1.51
HDAC3-209ENST00000486618 NPEPL1Q8NDH3 523 aa5.6□□□□□ -1.51
HDAC3-209ENST00000486618 SLC26A10Q8NG04 563 aa5.6□□□□□ -1.51
HDAC3-209ENST00000486618 TMEM170AQ8WVE7 144 aa5.6□□□□□ -1.51
HDAC3-209ENST00000486618 TAAR8Q969N4 342 aa5.6□□□□□ -1.51
HDAC3-209ENST00000486618 SMIM19Q96E16 107 aa5.6□□□□□ -1.51
HDAC3-209ENST00000486618 KCTD7Q96MP8 289 aa5.6□□□□□ -1.51
HDAC3-209ENST00000486618 CCDC115Q96NT0 180 aa5.6□□□□□ -1.51
HDAC3-209ENST00000486618 TSPAN32Q96QS1 320 aa5.6□□□□□ -1.51
HDAC3-209ENST00000486618 ARHGDIGQ99819 225 aa5.6□□□□□ -1.51
HDAC3-209ENST00000486618 EMC6Q9BV81 110 aa5.6□□□□□ -1.51
HDAC3-209ENST00000486618 RSPO3Q9BXY4 272 aaPredicted RBP5.6□□□□□ -1.51
HDAC3-209ENST00000486618 PATZ1Q9HBE1 687 aaKnown RBP5.6□□□□□ -1.51
HDAC3-209ENST00000486618 MMP26Q9NRE1 261 aa5.6□□□□□ -1.51
HDAC3-209ENST00000486618 C1orf123Q9NWV4 160 aa5.6□□□□□ -1.51
HDAC3-209ENST00000486618 ZNF224Q9NZL3 707 aa5.6□□□□□ -1.51
HDAC3-209ENST00000486618 OR5V1Q9UGF6 321 aa5.6□□□□□ -1.51
HDAC3-209ENST00000486618 ZNF443Q9Y2A4 671 aaPredicted RBP5.6□□□□□ -1.51
HDAC3-209ENST00000486618 INSIG2Q9Y5U4 225 aa5.6□□□□□ -1.51
HDAC3-209ENST00000486618 TANC2Q9HCD6 1990 aa5.6□□□□□ -1.51
HDAC3-209ENST00000486618 A0A087WUJ7 227 aa5.59□□□□□ -1.51
HDAC3-209ENST00000486618 PRORSD1PA6NEY8 169 aa5.59□□□□□ -1.51
HDAC3-209ENST00000486618 TRAPPC2LH3BP13 241 aa5.59□□□□□ -1.51
HDAC3-209ENST00000486618 SLC1A7O00341 560 aa5.59□□□□□ -1.51
HDAC3-209ENST00000486618 HOXA3O43365 443 aaPredicted RBP5.59□□□□□ -1.51
HDAC3-209ENST00000486618 SPRY3O43610 288 aa5.59□□□□□ -1.51
HDAC3-209ENST00000486618 SLC16A7O60669 478 aa5.59□□□□□ -1.51
HDAC3-209ENST00000486618 ENTPD6O75354 484 aa5.59□□□□□ -1.51
HDAC3-209ENST00000486618 NGFP01138 241 aa5.59□□□□□ -1.51
HDAC3-209ENST00000486618 IFNA1P01562 189 aa5.59□□□□□ -1.51
HDAC3-209ENST00000486618 IGHV1-46P01743 117 aa5.59□□□□□ -1.51
HDAC3-209ENST00000486618 GIPP09681 153 aaPredicted RBP5.59□□□□□ -1.51
HDAC3-209ENST00000486618 PATE4P0C8F1 98 aa5.59□□□□□ -1.51
HDAC3-209ENST00000486618 MAKP20794 623 aa5.59□□□□□ -1.51
HDAC3-209ENST00000486618 CBLP22681 906 aa5.59□□□□□ -1.51
HDAC3-209ENST00000486618 FPR3P25089 353 aa5.59□□□□□ -1.51
HDAC3-209ENST00000486618 S100A11P31949 105 aa5.59□□□□□ -1.51
HDAC3-209ENST00000486618 APLNRP35414 380 aa5.59□□□□□ -1.51
HDAC3-209ENST00000486618 UBE2MP61081 183 aaKnown RBP5.59□□□□□ -1.51
HDAC3-209ENST00000486618 RAP1AP62834 184 aa5.59□□□□□ -1.51
HDAC3-209ENST00000486618 PAX8Q06710 450 aa5.59□□□□□ -1.51
HDAC3-209ENST00000486618 ZNF616Q08AN1 781 aa5.59□□□□□ -1.51
HDAC3-209ENST00000486618 ZNF415Q09FC8 603 aa5.59□□□□□ -1.51
HDAC3-209ENST00000486618 TAF9Q16594 264 aa5.59□□□□□ -1.51
HDAC3-209ENST00000486618 TMEM155Q4W5P6 130 aa5.59□□□□□ -1.51
HDAC3-209ENST00000486618 SPANXN4Q5MJ08 99 aa5.59□□□□□ -1.51
HDAC3-209ENST00000486618 ATAD3CQ5T2N8 411 aa5.59□□□□□ -1.51
HDAC3-209ENST00000486618 WDR25Q64LD2 544 aaPredicted RBP5.59□□□□□ -1.51
HDAC3-209ENST00000486618 LINC00336Q6ZUF6 198 aa5.59□□□□□ -1.51
HDAC3-209ENST00000486618 SERPINA11Q86U17 422 aa5.59□□□□□ -1.51
HDAC3-209ENST00000486618 ZNF584Q8IVC4 421 aa5.59□□□□□ -1.51
HDAC3-209ENST00000486618 C1orf174Q8IYL3 243 aa5.59□□□□□ -1.51
HDAC3-209ENST00000486618 CLIP4Q8N3C7 705 aa5.59□□□□□ -1.51
HDAC3-209ENST00000486618 OR1J1Q8NGS3 322 aa5.59□□□□□ -1.51
HDAC3-209ENST00000486618 OR2AJ1Q8NGZ0 328 aa5.59□□□□□ -1.51
HDAC3-209ENST00000486618 Q8TCH9 128 aa5.59□□□□□ -1.51
HDAC3-209ENST00000486618 SFT2D1Q8WV19 159 aa5.59□□□□□ -1.51
HDAC3-209ENST00000486618 CCDC107Q8WV48 283 aa5.59□□□□□ -1.51
HDAC3-209ENST00000486618 TAF15Q92804 592 aaKnown RBP eCLIP5.59□□□□□ -1.51
HDAC3-209ENST00000486618 RAB3CQ96E17 227 aa5.59□□□□□ -1.51
HDAC3-209ENST00000486618 TXNDC15Q96J42 360 aa5.59□□□□□ -1.51
HDAC3-209ENST00000486618 DCLRE1CQ96SD1 692 aaKnown RBP5.59□□□□□ -1.51
HDAC3-209ENST00000486618 CCDC32Q9BV29 185 aa5.59□□□□□ -1.51
HDAC3-209ENST00000486618 DPCDQ9BVM2 203 aaPredicted RBP5.59□□□□□ -1.51
HDAC3-209ENST00000486618 CDCA4Q9BXL8 241 aa5.59□□□□□ -1.51
HDAC3-209ENST00000486618 MAGIXQ9H6Y5 334 aa5.59□□□□□ -1.51
HDAC3-209ENST00000486618 NANOGQ9H9S0 305 aa5.59□□□□□ -1.51
HDAC3-209ENST00000486618 ISYNA1Q9NPH2 558 aa5.59□□□□□ -1.51
HDAC3-209ENST00000486618 RASL12Q9NYN1 266 aa5.59□□□□□ -1.51
HDAC3-209ENST00000486618 VPREB3Q9UKI3 123 aa5.59□□□□□ -1.51
HDAC3-209ENST00000486618 OAZ3Q9UMX2 235 aa5.59□□□□□ -1.51
HDAC3-209ENST00000486618 BAIAP2Q9UQB8 552 aa5.59□□□□□ -1.51
HDAC3-209ENST00000486618 NOTCH3Q9UM47 2321 aa5.58□□□□□ -1.52
HDAC3-209ENST00000486618 TRAV24A0A0B4J272 114 aa5.58□□□□□ -1.52
HDAC3-209ENST00000486618 A0A1W2PPK0 400 aa5.58□□□□□ -1.52
HDAC3-209ENST00000486618 A8MXK9 166 aa5.58□□□□□ -1.52
HDAC3-209ENST00000486618 SRRM5B3KS81 715 aa5.58□□□□□ -1.52
HDAC3-209ENST00000486618 F8VVB4 439 aa5.58□□□□□ -1.52
HDAC3-209ENST00000486618 F8VWA3 439 aa5.58□□□□□ -1.52
HDAC3-209ENST00000486618 K7EN84 100 aa5.58□□□□□ -1.52
HDAC3-209ENST00000486618 K7ERU9 68 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms