RNA–Protein interactions for RNA: ENST00000486530.1

HPS3-206, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 5

Gene HPS3, Length 1,894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-206ENST00000486530 EWSR1Q01844 656 aaKnown RBP eCLIP17.02■□□□□ 0.32
HPS3-206ENST00000486530 UQCC3Q6UW78 93 aa17.02■□□□□ 0.32
HPS3-206ENST00000486530 RNASE11Q8TAA1 199 aaKnown RBP17.02■□□□□ 0.32
HPS3-206ENST00000486530 ARL11Q969Q4 196 aa17.02■□□□□ 0.32
HPS3-206ENST00000486530 BSCL2Q96G97 398 aaPredicted RBP17.02■□□□□ 0.32
HPS3-206ENST00000486530 OR2D2Q9H210 308 aa17.02■□□□□ 0.32
HPS3-206ENST00000486530 LYRM2Q9NU23 88 aaPredicted RBP17.02■□□□□ 0.32
HPS3-206ENST00000486530 MGST3O14880 152 aa17.01■□□□□ 0.31
HPS3-206ENST00000486530 SPINT2O43291 252 aa17.01■□□□□ 0.31
HPS3-206ENST00000486530 PITX3O75364 302 aa17.01■□□□□ 0.31
HPS3-206ENST00000486530 TNFSF4P23510 183 aa17.01■□□□□ 0.31
HPS3-206ENST00000486530 SSTR5P35346 364 aa17.01■□□□□ 0.31
HPS3-206ENST00000486530 SULT1A2P50226 295 aa17.01■□□□□ 0.31
HPS3-206ENST00000486530 CLEC9AQ6UXN8 241 aa17.01■□□□□ 0.31
HPS3-206ENST00000486530 WFDC8Q8IUA0 241 aa17.01■□□□□ 0.31
HPS3-206ENST00000486530 TPRX1Q8N7U7 411 aa17.01■□□□□ 0.31
HPS3-206ENST00000486530 GPR146Q96CH1 333 aa17.01■□□□□ 0.31
HPS3-206ENST00000486530 SMIM8Q96KF7 97 aa17.01■□□□□ 0.31
HPS3-206ENST00000486530 SLC25A31Q9H0C2 315 aa17.01■□□□□ 0.31
HPS3-206ENST00000486530 A0A0G2JRQ6 117 aa17.01■□□□□ 0.31
HPS3-206ENST00000486530 WRBO00258 174 aa17.01■□□□□ 0.31
HPS3-206ENST00000486530 IGKV1-39P01597 117 aa17.01■□□□□ 0.31
HPS3-206ENST00000486530 IGHV1-46P01743 117 aa17.01■□□□□ 0.31
HPS3-206ENST00000486530 IGKV1D-39P04432 117 aa17.01■□□□□ 0.31
HPS3-206ENST00000486530 ZNF16P17020 682 aaPredicted RBP17.01■□□□□ 0.31
HPS3-206ENST00000486530 CAV2P51636 162 aa17.01■□□□□ 0.31
HPS3-206ENST00000486530 HTD2P86397 168 aa17.01■□□□□ 0.31
HPS3-206ENST00000486530 TNFAIP6P98066 277 aaPredicted RBP17.01■□□□□ 0.31
HPS3-206ENST00000486530 KLRB1Q12918 225 aa17.01■□□□□ 0.31
HPS3-206ENST00000486530 EDDM3AQ14507 147 aa17.01■□□□□ 0.31
HPS3-206ENST00000486530 MAGT1Q9H0U3 335 aa17.01■□□□□ 0.31
HPS3-206ENST00000486530 NARFLQ9H6Q4 476 aa17.01■□□□□ 0.31
HPS3-206ENST00000486530 CACNA1AO00555 2505 aa17■□□□□ 0.31
HPS3-206ENST00000486530 IGHV3OR15-7A0A075B7D8 119 aa17■□□□□ 0.31
HPS3-206ENST00000486530 ADH4P08319 380 aa17■□□□□ 0.31
HPS3-206ENST00000486530 EPHA1P21709 976 aa17■□□□□ 0.31
HPS3-206ENST00000486530 NHLH2Q02577 135 aa17■□□□□ 0.31
HPS3-206ENST00000486530 ZNF585BQ52M93 769 aa17■□□□□ 0.31
HPS3-206ENST00000486530 GINS3Q9BRX5 216 aa17■□□□□ 0.31
HPS3-206ENST00000486530 WFDC1Q9HC57 220 aa17■□□□□ 0.31
HPS3-206ENST00000486530 ODAMA1E959 279 aa16.99■□□□□ 0.31
HPS3-206ENST00000486530 FAM24AA6NFZ4 105 aa16.99■□□□□ 0.31
HPS3-206ENST00000486530 C15orf65H3BRN8 121 aa16.99■□□□□ 0.31
HPS3-206ENST00000486530 ABCD4O14678 606 aa16.99■□□□□ 0.31
HPS3-206ENST00000486530 FBXO24O75426 580 aa16.99■□□□□ 0.31
HPS3-206ENST00000486530 PPP1CCP36873 323 aaKnown RBP16.99■□□□□ 0.31
HPS3-206ENST00000486530 AKR1C2P52895 323 aa16.99■□□□□ 0.31
HPS3-206ENST00000486530 TUSC1Q2TAM9 212 aa16.99■□□□□ 0.31
HPS3-206ENST00000486530 RND1Q92730 232 aa16.99■□□□□ 0.31
HPS3-206ENST00000486530 MMP26Q9NRE1 261 aa16.99■□□□□ 0.31
HPS3-206ENST00000486530 RNF7Q9UBF6 113 aa16.99■□□□□ 0.31
HPS3-206ENST00000486530 IGSF23A1L1A6 192 aa16.99■□□□□ 0.31
HPS3-206ENST00000486530 SEC11BP0C7V7 166 aa16.99■□□□□ 0.31
HPS3-206ENST00000486530 GZMHP20718 246 aa16.99■□□□□ 0.31
HPS3-206ENST00000486530 BAXQ07812 192 aa16.99■□□□□ 0.31
HPS3-206ENST00000486530 CATR1Q13166 79 aa16.99■□□□□ 0.31
HPS3-206ENST00000486530 IL34Q6ZMJ4 242 aa16.99■□□□□ 0.31
HPS3-206ENST00000486530 STPG2Q8N412 459 aa16.99■□□□□ 0.31
HPS3-206ENST00000486530 FAM222BQ8WU58 562 aa16.99■□□□□ 0.31
HPS3-206ENST00000486530 GCM1Q9NP62 436 aa16.99■□□□□ 0.31
HPS3-206ENST00000486530 RNF115Q9Y4L5 304 aa16.99■□□□□ 0.31
HPS3-206ENST00000486530 TLN1Q9Y490 2541 aaKnown RBP16.99■□□□□ 0.31
HPS3-206ENST00000486530 PLCE1Q9P212 2302 aa16.99■□□□□ 0.31
HPS3-206ENST00000486530 DPRXA6NFQ7 191 aa16.98■□□□□ 0.31
HPS3-206ENST00000486530 K7N7A8 449 aa16.98■□□□□ 0.31
HPS3-206ENST00000486530 MED6O75586 246 aa16.98■□□□□ 0.31
HPS3-206ENST00000486530 IGKV1-5P01602 117 aa16.98■□□□□ 0.31
HPS3-206ENST00000486530 THBDP07204 575 aa16.98■□□□□ 0.31
HPS3-206ENST00000486530 BLOC1S1P78537 153 aa16.98■□□□□ 0.31
HPS3-206ENST00000486530 EIF4EBP1Q13541 118 aaPredicted RBP16.98■□□□□ 0.31
HPS3-206ENST00000486530 MST1LQ2TV78 715 aa16.98■□□□□ 0.31
HPS3-206ENST00000486530 CR1LQ2VPA4 569 aa16.98■□□□□ 0.31
HPS3-206ENST00000486530 TMEM252Q8N6L7 170 aa16.98■□□□□ 0.31
HPS3-206ENST00000486530 Q8TCH9 128 aa16.98■□□□□ 0.31
HPS3-206ENST00000486530 FAM216AQ8WUB2 273 aa16.98■□□□□ 0.31
HPS3-206ENST00000486530 VKORC1Q9BQB6 163 aa16.98■□□□□ 0.31
HPS3-206ENST00000486530 PRORYQ9H606 182 aa16.98■□□□□ 0.31
HPS3-206ENST00000486530 RNF150Q9ULK6 438 aa16.98■□□□□ 0.31
HPS3-206ENST00000486530 CHD8Q9HCK8 2581 aa16.98■□□□□ 0.31
HPS3-206ENST00000486530 TMEM8BA6NDV4 472 aa16.97■□□□□ 0.31
HPS3-206ENST00000486530 ZNF266Q14584 549 aa16.97■□□□□ 0.31
HPS3-206ENST00000486530 PXDC1Q5TGL8 231 aa16.97■□□□□ 0.31
HPS3-206ENST00000486530 C5orf30Q96GV9 206 aa16.97■□□□□ 0.31
HPS3-206ENST00000486530 NCOR1P1Q9H4R4 102 aa16.97■□□□□ 0.31
HPS3-206ENST00000486530 FAM212BQ9NTI7 297 aaPredicted RBP16.97■□□□□ 0.31
HPS3-206ENST00000486530 CACNG5Q9UF02 275 aa16.97■□□□□ 0.31
HPS3-206ENST00000486530 CACNA1DQ01668 2161 aa16.97■□□□□ 0.31
HPS3-206ENST00000486530 CHST1O43916 411 aa16.97■□□□□ 0.31
HPS3-206ENST00000486530 CD80P33681 288 aa16.97■□□□□ 0.31
HPS3-206ENST00000486530 BSPH1Q075Z2 132 aa16.97■□□□□ 0.31
HPS3-206ENST00000486530 FAM53AQ6NSI3 398 aaPredicted RBP16.97■□□□□ 0.31
HPS3-206ENST00000486530 ZNF561Q8N587 486 aa16.97■□□□□ 0.31
HPS3-206ENST00000486530 TCTEX1D1Q8N7M0 179 aa16.97■□□□□ 0.31
HPS3-206ENST00000486530 EDARADDQ8WWZ3 215 aa16.97■□□□□ 0.31
HPS3-206ENST00000486530 DIRC2Q96SL1 478 aa16.97■□□□□ 0.31
HPS3-206ENST00000486530 DCTN5Q9BTE1 182 aa16.97■□□□□ 0.31
HPS3-206ENST00000486530 PARP11Q9NR21 331 aa16.97■□□□□ 0.31
HPS3-206ENST00000486530 JPT1Q9UK76 154 aa16.97■□□□□ 0.31
HPS3-206ENST00000486530 KIAA1324LA8MWY0 1029 aaPredicted RBP16.96■□□□□ 0.31
HPS3-206ENST00000486530 SCO1O75880 301 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms