RNA–Protein interactions for RNA: ENST00000486311.5

SREBF1-214, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 473 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-214ENST00000486311 NANOGP1Q8N7R0 232 aa17.57■□□□□ 0.4
SREBF1-214ENST00000486311 OR8U1Q8NH10 309 aa17.57■□□□□ 0.4
SREBF1-214ENST00000486311 MRPL30Q8TCC3 161 aaKnown RBP17.57■□□□□ 0.4
SREBF1-214ENST00000486311 FCGR1BQ92637 280 aa17.57■□□□□ 0.4
SREBF1-214ENST00000486311 RBMXL1Q96E39 390 aaKnown RBP17.57■□□□□ 0.4
SREBF1-214ENST00000486311 KCNIP1Q9NZI2 227 aa17.57■□□□□ 0.4
SREBF1-214ENST00000486311 IGHG4P01861 327 aa17.56■□□□□ 0.4
SREBF1-214ENST00000486311 IGF1P05019 195 aa17.56■□□□□ 0.4
SREBF1-214ENST00000486311 IRF3Q14653 427 aa17.56■□□□□ 0.4
SREBF1-214ENST00000486311 C11orf87Q6NUJ2 197 aa17.56■□□□□ 0.4
SREBF1-214ENST00000486311 CST11Q9H112 138 aa17.56■□□□□ 0.4
SREBF1-214ENST00000486311 JPT1Q9UK76 154 aa17.56■□□□□ 0.4
SREBF1-214ENST00000486311 VDAC1P21796 283 aa17.55■□□□□ 0.4
SREBF1-214ENST00000486311 HTD2P86397 168 aa17.55■□□□□ 0.4
SREBF1-214ENST00000486311 DCTN2Q13561 401 aaKnown RBP17.55■□□□□ 0.4
SREBF1-214ENST00000486311 GNMTQ14749 295 aa17.55■□□□□ 0.4
SREBF1-214ENST00000486311 SPARTQ8N0X7 666 aa17.55■□□□□ 0.4
SREBF1-214ENST00000486311 OR52L2PQ8NGH6 319 aa17.55■□□□□ 0.4
SREBF1-214ENST00000486311 FAM46BQ96A09 425 aa17.55■□□□□ 0.4
SREBF1-214ENST00000486311 B9D2Q9BPU9 175 aa17.55■□□□□ 0.4
SREBF1-214ENST00000486311 ABHD14AQ9BUJ0 271 aa17.55■□□□□ 0.4
SREBF1-214ENST00000486311 UBBP0CG47 229 aa17.54■□□□□ 0.4
SREBF1-214ENST00000486311 RAB25P57735 213 aa17.54■□□□□ 0.4
SREBF1-214ENST00000486311 DGCR2P98153 550 aa17.54■□□□□ 0.4
SREBF1-214ENST00000486311 CD69Q07108 199 aa17.54■□□□□ 0.4
SREBF1-214ENST00000486311 DEFB136Q30KP8 78 aa17.54■□□□□ 0.4
SREBF1-214ENST00000486311 LY6G6FQ5SQ64 297 aa17.54■□□□□ 0.4
SREBF1-214ENST00000486311 ZNF367Q7RTV3 350 aa17.54■□□□□ 0.4
SREBF1-214ENST00000486311 C5orf24Q7Z6I8 188 aa17.54■□□□□ 0.4
SREBF1-214ENST00000486311 ODF3L1Q8IXM7 274 aa17.54■□□□□ 0.4
SREBF1-214ENST00000486311 KCTD7Q96MP8 289 aa17.54■□□□□ 0.4
SREBF1-214ENST00000486311 ZNF107Q9UII5 783 aaPredicted RBP17.54■□□□□ 0.4
SREBF1-214ENST00000486311 YPEL1O60688 119 aa17.53■□□□□ 0.4
SREBF1-214ENST00000486311 OR5H8P0DN80 308 aa17.53■□□□□ 0.4
SREBF1-214ENST00000486311 PSMB8P28062 276 aa17.53■□□□□ 0.4
SREBF1-214ENST00000486311 PPP1CCP36873 323 aaKnown RBP17.53■□□□□ 0.4
SREBF1-214ENST00000486311 SPHARQ15513 63 aa17.53■□□□□ 0.4
SREBF1-214ENST00000486311 MED22Q15528 200 aa17.53■□□□□ 0.4
SREBF1-214ENST00000486311 MMDQ15546 238 aa17.53■□□□□ 0.4
SREBF1-214ENST00000486311 NKAPLQ5M9Q1 402 aa17.53■□□□□ 0.4
SREBF1-214ENST00000486311 OR5M8Q8NGP6 311 aa17.53■□□□□ 0.4
SREBF1-214ENST00000486311 YPEL2Q96QA6 119 aa17.53■□□□□ 0.4
SREBF1-214ENST00000486311 CHCHD6Q9BRQ6 235 aa17.53■□□□□ 0.4
SREBF1-214ENST00000486311 MRPS26Q9BYN8 205 aaKnown RBP17.53■□□□□ 0.4
SREBF1-214ENST00000486311 ACOT13Q9NPJ3 140 aa17.53■□□□□ 0.4
SREBF1-214ENST00000486311 RAMP3O60896 148 aa17.52■□□□□ 0.4
SREBF1-214ENST00000486311 CHATP28329 748 aa17.52■□□□□ 0.4
SREBF1-214ENST00000486311 INSL4Q14641 139 aa17.52■□□□□ 0.4
SREBF1-214ENST00000486311 ACSM3Q53FZ2 586 aa17.52■□□□□ 0.4
SREBF1-214ENST00000486311 MS4A15Q8N5U1 240 aa17.52■□□□□ 0.4
SREBF1-214ENST00000486311 MYOZ3Q8TDC0 251 aa17.52■□□□□ 0.4
SREBF1-214ENST00000486311 C4orf3Q8WVX3 66 aa17.52■□□□□ 0.4
SREBF1-214ENST00000486311 NEDD4LQ96PU5 975 aa17.52■□□□□ 0.4
SREBF1-214ENST00000486311 NABP2Q9BQ15 211 aa17.52■□□□□ 0.4
SREBF1-214ENST00000486311 SULT4A1Q9BR01 284 aa17.52■□□□□ 0.4
SREBF1-214ENST00000486311 MRPL20Q9BYC9 149 aaKnown RBP17.52■□□□□ 0.4
SREBF1-214ENST00000486311 TENM3Q9P273 2699 aa17.51■□□□□ 0.39
SREBF1-214ENST00000486311 RGS11O94810 467 aa17.51■□□□□ 0.39
SREBF1-214ENST00000486311 VSIG8P0DPA2 414 aa17.51■□□□□ 0.39
SREBF1-214ENST00000486311 SLC2A2P11168 524 aaPredicted RBP17.51■□□□□ 0.39
SREBF1-214ENST00000486311 MAP2K4P45985 399 aa17.51■□□□□ 0.39
SREBF1-214ENST00000486311 ACTBP60709 375 aa17.51■□□□□ 0.39
SREBF1-214ENST00000486311 HMGN3Q15651 99 aa17.51■□□□□ 0.39
SREBF1-214ENST00000486311 C1orf100Q5SVJ3 147 aa17.51■□□□□ 0.39
SREBF1-214ENST00000486311 NBEAL2Q6ZNJ1 2754 aa17.51■□□□□ 0.39
SREBF1-214ENST00000486311 ZNF833PQ6ZTB9 187 aa17.51■□□□□ 0.39
SREBF1-214ENST00000486311 LRRTM1Q86UE6 522 aa17.51■□□□□ 0.39
SREBF1-214ENST00000486311 PHYHIPQ92561 330 aa17.51■□□□□ 0.39
SREBF1-214ENST00000486311 GALMQ96C23 342 aa17.51■□□□□ 0.39
SREBF1-214ENST00000486311 RITA1Q96K30 269 aa17.51■□□□□ 0.39
SREBF1-214ENST00000486311 ISYNA1Q9NPH2 558 aa17.51■□□□□ 0.39
SREBF1-214ENST00000486311 SCOCQ9UIL1 159 aa17.51■□□□□ 0.39
SREBF1-214ENST00000486311 TRIM64CA6NLI5 447 aa17.5■□□□□ 0.39
SREBF1-214ENST00000486311 PPIFP30405 207 aaKnown RBP17.5■□□□□ 0.39
SREBF1-214ENST00000486311 LUMP51884 338 aaPredicted RBP17.5■□□□□ 0.39
SREBF1-214ENST00000486311 RPS27AP62979 156 aaKnown RBP17.5■□□□□ 0.39
SREBF1-214ENST00000486311 FHL3Q13643 280 aa17.5■□□□□ 0.39
SREBF1-214ENST00000486311 FAM27D1Q5T7N8 215 aa17.5■□□□□ 0.39
SREBF1-214ENST00000486311 C9orf66Q5T8R8 295 aa17.5■□□□□ 0.39
SREBF1-214ENST00000486311 UBE2UQ5VVX9 321 aa17.5■□□□□ 0.39
SREBF1-214ENST00000486311 GLT8D1Q68CQ7 371 aa17.5■□□□□ 0.39
SREBF1-214ENST00000486311 OR10K2Q6IF99 312 aa17.5■□□□□ 0.39
SREBF1-214ENST00000486311 LSM2Q9Y333 95 aaKnown RBP17.5■□□□□ 0.39
SREBF1-214ENST00000486311 HLA-DRB1P01911 266 aa17.49■□□□□ 0.39
SREBF1-214ENST00000486311 OR3A3P47888 321 aa17.49■□□□□ 0.39
SREBF1-214ENST00000486311 MLLT11Q13015 90 aaPredicted RBP17.49■□□□□ 0.39
SREBF1-214ENST00000486311 OR2AK2Q8NG84 335 aa17.49■□□□□ 0.39
SREBF1-214ENST00000486311 ZNF251Q9BRH9 671 aa17.49■□□□□ 0.39
SREBF1-214ENST00000486311 FAAP24Q9BTP7 215 aa17.49■□□□□ 0.39
SREBF1-214ENST00000486311 TMEM59Q9BXS4 323 aa17.49■□□□□ 0.39
SREBF1-214ENST00000486311 OR51J1Q9H342 316 aa17.49■□□□□ 0.39
SREBF1-214ENST00000486311 SAA2-SAA4A0A096LPE2 208 aa17.48■□□□□ 0.39
SREBF1-214ENST00000486311 NBR2O15453 112 aa17.48■□□□□ 0.39
SREBF1-214ENST00000486311 HSMCR30P0CW71 290 aa17.48■□□□□ 0.39
SREBF1-214ENST00000486311 SAA2P0DJI9 122 aaPredicted RBP17.48■□□□□ 0.39
SREBF1-214ENST00000486311 SMIM18P0DKX4 95 aa17.48■□□□□ 0.39
SREBF1-214ENST00000486311 CNTFRP26992 372 aa17.48■□□□□ 0.39
SREBF1-214ENST00000486311 HTR2CP28335 458 aa17.48■□□□□ 0.39
SREBF1-214ENST00000486311 KIAA0141Q14154 515 aaPredicted RBP17.48■□□□□ 0.39
SREBF1-214ENST00000486311 NEDD8Q15843 81 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms