RNA–Protein interactions for RNA: ENST00000485901.1

HLA-DOA-204, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

Gene HLA-DOA, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-204ENST00000485901 YPEL2Q96QA6 119 aa9.61□□□□□ -0.87
HLA-DOA-204ENST00000485901 HDHD3Q9BSH5 251 aaPredicted RBP9.61□□□□□ -0.87
HLA-DOA-204ENST00000485901 FUNDC2Q9BWH2 189 aa9.61□□□□□ -0.87
HLA-DOA-204ENST00000485901 RANBP3Q9H6Z4 567 aaPredicted RBP9.61□□□□□ -0.87
HLA-DOA-204ENST00000485901 Q9N2K0 584 aa9.61□□□□□ -0.87
HLA-DOA-204ENST00000485901 KCNK7Q9Y2U2 307 aa9.61□□□□□ -0.87
HLA-DOA-204ENST00000485901 LPLP06858 475 aa9.6□□□□□ -0.87
HLA-DOA-204ENST00000485901 SMIM18P0DKX4 95 aa9.6□□□□□ -0.87
HLA-DOA-204ENST00000485901 GNB3P16520 340 aa9.6□□□□□ -0.87
HLA-DOA-204ENST00000485901 TALDO1P37837 337 aa9.6□□□□□ -0.87
HLA-DOA-204ENST00000485901 RPS19P39019 145 aaKnown RBP9.6□□□□□ -0.87
HLA-DOA-204ENST00000485901 ZNF134P52741 427 aa9.6□□□□□ -0.87
HLA-DOA-204ENST00000485901 HIST2H2BDQ6DRA6 164 aa9.6□□□□□ -0.87
HLA-DOA-204ENST00000485901 C16orf82Q7Z2V1 217 aa9.6□□□□□ -0.87
HLA-DOA-204ENST00000485901 C5orf24Q7Z6I8 188 aa9.6□□□□□ -0.87
HLA-DOA-204ENST00000485901 TMEM219Q86XT9 240 aa9.6□□□□□ -0.87
HLA-DOA-204ENST00000485901 ZNF439Q8NDP4 499 aa9.6□□□□□ -0.87
HLA-DOA-204ENST00000485901 FAM110DQ8TAY7 271 aaPredicted RBP9.6□□□□□ -0.87
HLA-DOA-204ENST00000485901 CAPSLQ8WWF8 208 aa9.6□□□□□ -0.87
HLA-DOA-204ENST00000485901 CFHR4Q92496 578 aa9.6□□□□□ -0.87
HLA-DOA-204ENST00000485901 PHF21AQ96BD5 680 aa9.6□□□□□ -0.87
HLA-DOA-204ENST00000485901 AKR1E2Q96JD6 320 aa9.6□□□□□ -0.87
HLA-DOA-204ENST00000485901 MRPS26Q9BYN8 205 aaKnown RBP9.6□□□□□ -0.87
HLA-DOA-204ENST00000485901 ETV7Q9Y603 341 aa9.6□□□□□ -0.87
HLA-DOA-204ENST00000485901 A0A075B6Q4 140 aa9.59□□□□□ -0.87
HLA-DOA-204ENST00000485901 FAM90A9PA6NNJ1 464 aa9.59□□□□□ -0.87
HLA-DOA-204ENST00000485901 TRDCB7Z8K6 153 aa9.59□□□□□ -0.87
HLA-DOA-204ENST00000485901 MFNGO00587 321 aa9.59□□□□□ -0.87
HLA-DOA-204ENST00000485901 HSD17B6O14756 317 aa9.59□□□□□ -0.87
HLA-DOA-204ENST00000485901 CHST1O43916 411 aa9.59□□□□□ -0.87
HLA-DOA-204ENST00000485901 ZBTB25P24278 435 aa9.59□□□□□ -0.87
HLA-DOA-204ENST00000485901 CD24P25063 80 aa9.59□□□□□ -0.87
HLA-DOA-204ENST00000485901 PPP1CCP36873 323 aaKnown RBP9.59□□□□□ -0.87
HLA-DOA-204ENST00000485901 ZNF816Q0VGE8 651 aaPredicted RBP9.59□□□□□ -0.87
HLA-DOA-204ENST00000485901 ARFRP1Q13795 201 aa9.59□□□□□ -0.87
HLA-DOA-204ENST00000485901 DIAPH2-AS1Q14236 149 aa9.59□□□□□ -0.87
HLA-DOA-204ENST00000485901 GNMTQ14749 295 aa9.59□□□□□ -0.87
HLA-DOA-204ENST00000485901 CDNFQ49AH0 187 aa9.59□□□□□ -0.87
HLA-DOA-204ENST00000485901 Q6ZPA2 131 aa9.59□□□□□ -0.87
HLA-DOA-204ENST00000485901 MOB3BQ86TA1 216 aa9.59□□□□□ -0.87
HLA-DOA-204ENST00000485901 LYG1Q8N1E2 194 aa9.59□□□□□ -0.87
HLA-DOA-204ENST00000485901 DRAM1Q8N682 238 aa9.59□□□□□ -0.87
HLA-DOA-204ENST00000485901 OR2T6Q8NHC8 308 aa9.59□□□□□ -0.87
HLA-DOA-204ENST00000485901 LGALS14Q8TCE9 139 aa9.59□□□□□ -0.87
HLA-DOA-204ENST00000485901 ST6GALNAC6Q969X2 333 aa9.59□□□□□ -0.87
HLA-DOA-204ENST00000485901 PRSS22Q9GZN4 317 aa9.59□□□□□ -0.87
HLA-DOA-204ENST00000485901 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.59□□□□□ -0.87
HLA-DOA-204ENST00000485901 RHBDL2Q9NX52 303 aa9.59□□□□□ -0.87
HLA-DOA-204ENST00000485901 SPATA2Q9UM82 520 aa9.59□□□□□ -0.87
HLA-DOA-204ENST00000485901 IGHV1-3A0A0C4DH29 117 aa9.58□□□□□ -0.88
HLA-DOA-204ENST00000485901 A0A1W2PPI3 338 aa9.58□□□□□ -0.88
HLA-DOA-204ENST00000485901 SLC31A2O15432 143 aa9.58□□□□□ -0.88
HLA-DOA-204ENST00000485901 HSPA12AO43301 675 aa9.58□□□□□ -0.88
HLA-DOA-204ENST00000485901 TXNL1O43396 289 aa9.58□□□□□ -0.88
HLA-DOA-204ENST00000485901 GSTP1P09211 210 aaKnown RBP9.58□□□□□ -0.88
HLA-DOA-204ENST00000485901 SCTP09683 121 aa9.58□□□□□ -0.88
HLA-DOA-204ENST00000485901 TGFBR1P36897 503 aa9.58□□□□□ -0.88
HLA-DOA-204ENST00000485901 CEACAM6P40199 344 aa9.58□□□□□ -0.88
HLA-DOA-204ENST00000485901 ZNF137PP52743 207 aa9.58□□□□□ -0.88
HLA-DOA-204ENST00000485901 HLA-DRB3P79483 266 aa9.58□□□□□ -0.88
HLA-DOA-204ENST00000485901 PITPNAQ00169 270 aa9.58□□□□□ -0.88
HLA-DOA-204ENST00000485901 KIR2DS1Q14954 304 aa9.58□□□□□ -0.88
HLA-DOA-204ENST00000485901 SRSF7Q16629 238 aaKnown RBP eCLIP9.58□□□□□ -0.88
HLA-DOA-204ENST00000485901 HACD4Q5VWC8 232 aa9.58□□□□□ -0.88
HLA-DOA-204ENST00000485901 OR2AK2Q8NG84 335 aa9.58□□□□□ -0.88
HLA-DOA-204ENST00000485901 OR5H6Q8NGV6 325 aa9.58□□□□□ -0.88
HLA-DOA-204ENST00000485901 OR56B4Q8NH76 319 aa9.58□□□□□ -0.88
HLA-DOA-204ENST00000485901 RTN4IP1Q8WWV3 396 aaPredicted RBP9.58□□□□□ -0.88
HLA-DOA-204ENST00000485901 RBM14Q96PK6 669 aaKnown RBP9.58□□□□□ -0.88
HLA-DOA-204ENST00000485901 ABHD14AQ9BUJ0 271 aa9.58□□□□□ -0.88
HLA-DOA-204ENST00000485901 GHITMQ9H3K2 345 aa9.58□□□□□ -0.88
HLA-DOA-204ENST00000485901 SLC23A1Q9UHI7 598 aa9.58□□□□□ -0.88
HLA-DOA-204ENST00000485901 A0A0A6YYH2 397 aa9.57□□□□□ -0.88
HLA-DOA-204ENST00000485901 A6NJ64 397 aa9.57□□□□□ -0.88
HLA-DOA-204ENST00000485901 M0QZK8 103 aa9.57□□□□□ -0.88
HLA-DOA-204ENST00000485901 ITGB1BP1O14713 200 aa9.57□□□□□ -0.88
HLA-DOA-204ENST00000485901 LANCL1O43813 399 aa9.57□□□□□ -0.88
HLA-DOA-204ENST00000485901 OR2F2O95006 317 aa9.57□□□□□ -0.88
HLA-DOA-204ENST00000485901 SNRNP70P08621 437 aaKnown RBP9.57□□□□□ -0.88
HLA-DOA-204ENST00000485901 FCGR3AP08637 254 aa9.57□□□□□ -0.88
HLA-DOA-204ENST00000485901 CD1BP29016 333 aa9.57□□□□□ -0.88
HLA-DOA-204ENST00000485901 REG1BP48304 166 aa9.57□□□□□ -0.88
HLA-DOA-204ENST00000485901 SERPINB10P48595 397 aa9.57□□□□□ -0.88
HLA-DOA-204ENST00000485901 NCS1P62166 190 aa9.57□□□□□ -0.88
HLA-DOA-204ENST00000485901 HES1Q14469 280 aa9.57□□□□□ -0.88
HLA-DOA-204ENST00000485901 HABP2Q14520 560 aaPredicted RBP9.57□□□□□ -0.88
HLA-DOA-204ENST00000485901 ANKRD13BQ86YJ7 626 aa9.57□□□□□ -0.88
HLA-DOA-204ENST00000485901 C1QL4Q86Z23 238 aa9.57□□□□□ -0.88
HLA-DOA-204ENST00000485901 TGIF2LXQ8IUE1 241 aa9.57□□□□□ -0.88
HLA-DOA-204ENST00000485901 Q8N2B8 174 aa9.57□□□□□ -0.88
HLA-DOA-204ENST00000485901 OR4A4PQ8NGN8 299 aa9.57□□□□□ -0.88
HLA-DOA-204ENST00000485901 EDARADDQ8WWZ3 215 aa9.57□□□□□ -0.88
HLA-DOA-204ENST00000485901 SLC25A33Q9BSK2 321 aa9.57□□□□□ -0.88
HLA-DOA-204ENST00000485901 DIABLOQ9NR28 239 aa9.57□□□□□ -0.88
HLA-DOA-204ENST00000485901 NBEAL2Q6ZNJ1 2754 aa9.57□□□□□ -0.88
HLA-DOA-204ENST00000485901 G3V4G9 280 aa9.56□□□□□ -0.88
HLA-DOA-204ENST00000485901 RAB29O14966 203 aa9.56□□□□□ -0.88
HLA-DOA-204ENST00000485901 FABP7O15540 132 aa9.56□□□□□ -0.88
HLA-DOA-204ENST00000485901 TFAP2AP05549 437 aa9.56□□□□□ -0.88
HLA-DOA-204ENST00000485901 TMEM11P17152 192 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms