RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 SOX6P35712 828 aa9.54□□□□□ -0.88
HPS4-214ENST00000485842 ZNF134P52741 427 aa9.54□□□□□ -0.88
HPS4-214ENST00000485842 PNLIPRP3Q17RR3 467 aa9.54□□□□□ -0.88
HPS4-214ENST00000485842 CT45A1Q5HYN5 189 aa9.54□□□□□ -0.88
HPS4-214ENST00000485842 TMEM69Q5SWH9 247 aa9.54□□□□□ -0.88
HPS4-214ENST00000485842 DHRS7BQ6IAN0 325 aaPredicted RBP9.54□□□□□ -0.88
HPS4-214ENST00000485842 CCDC144NLQ6NUI1 221 aa9.54□□□□□ -0.88
HPS4-214ENST00000485842 MZT2AQ6P582 158 aa9.54□□□□□ -0.88
HPS4-214ENST00000485842 TMEM219Q86XT9 240 aa9.54□□□□□ -0.88
HPS4-214ENST00000485842 LYG1Q8N1E2 194 aa9.54□□□□□ -0.88
HPS4-214ENST00000485842 C8orf31Q8N9H6 132 aa9.54□□□□□ -0.88
HPS4-214ENST00000485842 OR2AK2Q8NG84 335 aa9.54□□□□□ -0.88
HPS4-214ENST00000485842 CT45A3Q8NHU0 189 aa9.54□□□□□ -0.88
HPS4-214ENST00000485842 PIFOQ8TCI5 191 aa9.54□□□□□ -0.88
HPS4-214ENST00000485842 YPEL2Q96QA6 119 aa9.54□□□□□ -0.88
HPS4-214ENST00000485842 ST6GALNAC5Q9BVH7 336 aa9.54□□□□□ -0.88
HPS4-214ENST00000485842 PARP12Q9H0J9 701 aaKnown RBP9.54□□□□□ -0.88
HPS4-214ENST00000485842 AUNIPQ9H7T9 357 aa9.54□□□□□ -0.88
HPS4-214ENST00000485842 TCF19Q9Y242 345 aa9.54□□□□□ -0.88
HPS4-214ENST00000485842 IGKV1D-8A0A087WSZ0 117 aa9.53□□□□□ -0.88
HPS4-214ENST00000485842 IGKV1-6A0A0C4DH72 117 aa9.53□□□□□ -0.88
HPS4-214ENST00000485842 A0A1W2PPI3 338 aa9.53□□□□□ -0.88
HPS4-214ENST00000485842 FAM25AB3EWG3 89 aa9.53□□□□□ -0.88
HPS4-214ENST00000485842 FAM25CB3EWG5 89 aa9.53□□□□□ -0.88
HPS4-214ENST00000485842 FAM25GB3EWG6 89 aa9.53□□□□□ -0.88
HPS4-214ENST00000485842 H3BMQ9 156 aa9.53□□□□□ -0.88
HPS4-214ENST00000485842 TIMM23O14925 209 aa9.53□□□□□ -0.88
HPS4-214ENST00000485842 ST8SIA5O15466 376 aa9.53□□□□□ -0.88
HPS4-214ENST00000485842 XRCC3O43542 346 aa9.53□□□□□ -0.88
HPS4-214ENST00000485842 CHST1O43916 411 aa9.53□□□□□ -0.88
HPS4-214ENST00000485842 GSTT2P0CG29 244 aa9.53□□□□□ -0.88
HPS4-214ENST00000485842 GSTT2BP0CG30 244 aa9.53□□□□□ -0.88
HPS4-214ENST00000485842 HKR1P10072 659 aa9.53□□□□□ -0.88
HPS4-214ENST00000485842 ZBTB25P24278 435 aa9.53□□□□□ -0.88
HPS4-214ENST00000485842 CEACAM6P40199 344 aa9.53□□□□□ -0.88
HPS4-214ENST00000485842 RAB7AP51149 207 aa9.53□□□□□ -0.88
HPS4-214ENST00000485842 DYNLT3P51808 116 aa9.53□□□□□ -0.88
HPS4-214ENST00000485842 TAS2R20P59543 309 aa9.53□□□□□ -0.88
HPS4-214ENST00000485842 PITPNAQ00169 270 aa9.53□□□□□ -0.88
HPS4-214ENST00000485842 HERPUD1Q15011 391 aa9.53□□□□□ -0.88
HPS4-214ENST00000485842 IGSF11Q5DX21 431 aa9.53□□□□□ -0.88
HPS4-214ENST00000485842 MOB3BQ86TA1 216 aa9.53□□□□□ -0.88
HPS4-214ENST00000485842 OR4A4PQ8NGN8 299 aa9.53□□□□□ -0.88
HPS4-214ENST00000485842 OR56B4Q8NH76 319 aa9.53□□□□□ -0.88
HPS4-214ENST00000485842 CAPSLQ8WWF8 208 aa9.53□□□□□ -0.88
HPS4-214ENST00000485842 CEPT1Q9Y6K0 416 aa9.53□□□□□ -0.88
HPS4-214ENST00000485842 COL6A5A8TX70 2615 aa9.52□□□□□ -0.88
HPS4-214ENST00000485842 MEIS3P1A6NDR6 274 aa9.52□□□□□ -0.89
HPS4-214ENST00000485842 APOA1P02647 267 aa9.52□□□□□ -0.89
HPS4-214ENST00000485842 GAPDHP04406 335 aaKnown RBP9.52□□□□□ -0.89
HPS4-214ENST00000485842 FCER2P06734 321 aa9.52□□□□□ -0.89
HPS4-214ENST00000485842 ELK1P19419 428 aa9.52□□□□□ -0.89
HPS4-214ENST00000485842 RAG2P55895 527 aa9.52□□□□□ -0.89
HPS4-214ENST00000485842 ZNF816Q0VGE8 651 aaPredicted RBP9.52□□□□□ -0.89
HPS4-214ENST00000485842 CCBE1Q6UXH8 406 aaPredicted RBP9.52□□□□□ -0.89
HPS4-214ENST00000485842 TGIF2LXQ8IUE1 241 aa9.52□□□□□ -0.89
HPS4-214ENST00000485842 OR8H3Q8N146 312 aa9.52□□□□□ -0.89
HPS4-214ENST00000485842 DRAM1Q8N682 238 aa9.52□□□□□ -0.89
HPS4-214ENST00000485842 DYNC2LI1Q8TCX1 351 aa9.52□□□□□ -0.89
HPS4-214ENST00000485842 GINS4Q9BRT9 223 aa9.52□□□□□ -0.89
HPS4-214ENST00000485842 CABLES2Q9BTV7 478 aa9.52□□□□□ -0.89
HPS4-214ENST00000485842 C1RLQ9NZP8 487 aa9.52□□□□□ -0.89
HPS4-214ENST00000485842 PITPNC1Q9UKF7 332 aa9.52□□□□□ -0.89
HPS4-214ENST00000485842 IGHV3-72A0A0B4J1Y9 119 aa9.51□□□□□ -0.89
HPS4-214ENST00000485842 IGHV1-3A0A0C4DH29 117 aa9.51□□□□□ -0.89
HPS4-214ENST00000485842 SMIM31A0A1B0GVY4 71 aa9.51□□□□□ -0.89
HPS4-214ENST00000485842 TMEM89A2RUT3 159 aa9.51□□□□□ -0.89
HPS4-214ENST00000485842 A6NDX4 124 aa9.51□□□□□ -0.89
HPS4-214ENST00000485842 RGS5O15539 181 aa9.51□□□□□ -0.89
HPS4-214ENST00000485842 LPLP06858 475 aa9.51□□□□□ -0.89
HPS4-214ENST00000485842 SNRNP70P08621 437 aaKnown RBP9.51□□□□□ -0.89
HPS4-214ENST00000485842 OR3A3P47888 321 aa9.51□□□□□ -0.89
HPS4-214ENST00000485842 RPL15P61313 204 aaKnown RBP9.51□□□□□ -0.89
HPS4-214ENST00000485842 RELBQ01201 579 aa9.51□□□□□ -0.89
HPS4-214ENST00000485842 HES1Q14469 280 aa9.51□□□□□ -0.89
HPS4-214ENST00000485842 FBLN7Q53RD9 439 aa9.51□□□□□ -0.89
HPS4-214ENST00000485842 LY6G6FQ5SQ64 297 aa9.51□□□□□ -0.89
HPS4-214ENST00000485842 LIAT1Q6ZQX7 453 aa9.51□□□□□ -0.89
HPS4-214ENST00000485842 Q6ZS49 121 aa9.51□□□□□ -0.89
HPS4-214ENST00000485842 GVQW1Q8N7I0 195 aa9.51□□□□□ -0.89
HPS4-214ENST00000485842 OR10J5Q8NHC4 309 aa9.51□□□□□ -0.89
HPS4-214ENST00000485842 RTN4IP1Q8WWV3 396 aaPredicted RBP9.51□□□□□ -0.89
HPS4-214ENST00000485842 EDARADDQ8WWZ3 215 aa9.51□□□□□ -0.89
HPS4-214ENST00000485842 CFHR4Q92496 578 aa9.51□□□□□ -0.89
HPS4-214ENST00000485842 ABHD14BQ96IU4 210 aa9.51□□□□□ -0.89
HPS4-214ENST00000485842 CMTM3Q96MX0 182 aa9.51□□□□□ -0.89
HPS4-214ENST00000485842 C11orf54Q9H0W9 315 aaPredicted RBP9.51□□□□□ -0.89
HPS4-214ENST00000485842 IFI27L2Q9H2X8 130 aa9.51□□□□□ -0.89
HPS4-214ENST00000485842 RAB18Q9NP72 206 aa9.51□□□□□ -0.89
HPS4-214ENST00000485842 IFT46Q9NQC8 304 aa9.51□□□□□ -0.89
HPS4-214ENST00000485842 RDH8Q9NYR8 311 aa9.51□□□□□ -0.89
HPS4-214ENST00000485842 CCDC59Q9P031 241 aaKnown RBP9.51□□□□□ -0.89
HPS4-214ENST00000485842 MRPS7Q9Y2R9 242 aaKnown RBP9.51□□□□□ -0.89
HPS4-214ENST00000485842 SAA2-SAA4A0A096LPE2 208 aa9.5□□□□□ -0.89
HPS4-214ENST00000485842 TRBV6-7A0A0A0MS04 114 aa9.5□□□□□ -0.89
HPS4-214ENST00000485842 TXNL1O43396 289 aa9.5□□□□□ -0.89
HPS4-214ENST00000485842 LANCL1O43813 399 aa9.5□□□□□ -0.89
HPS4-214ENST00000485842 IGKV1D-33P01593 117 aa9.5□□□□□ -0.89
HPS4-214ENST00000485842 IGKV1-33P01594 117 aa9.5□□□□□ -0.89
HPS4-214ENST00000485842 SAA2P0DJI9 122 aaPredicted RBP9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms