RNA–Protein interactions for RNA: ENST00000485628.2

APOE-205, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-205ENST00000485628 ANK3Q12955 4377 aaKnown RBP12.89□□□□□ -0.35
APOE-205ENST00000485628 LY6LH3BQJ8 138 aa12.88□□□□□ -0.35
APOE-205ENST00000485628 J3QR06 171 aa12.88□□□□□ -0.35
APOE-205ENST00000485628 M0QYG6 137 aa12.88□□□□□ -0.35
APOE-205ENST00000485628 BET1O15155 118 aa12.88□□□□□ -0.35
APOE-205ENST00000485628 SLC31A2O15432 143 aa12.88□□□□□ -0.35
APOE-205ENST00000485628 RAB3DO95716 219 aa12.88□□□□□ -0.35
APOE-205ENST00000485628 LY6G6DO95868 133 aa12.88□□□□□ -0.35
APOE-205ENST00000485628 BTCP35070 178 aa12.88□□□□□ -0.35
APOE-205ENST00000485628 ZNF137PP52743 207 aa12.88□□□□□ -0.35
APOE-205ENST00000485628 AP3S2P59780 193 aa12.88□□□□□ -0.35
APOE-205ENST00000485628 ARPC4P59998 168 aa12.88□□□□□ -0.35
APOE-205ENST00000485628 LDLRAD2Q5SZI1 272 aa12.88□□□□□ -0.35
APOE-205ENST00000485628 AADACL3Q5VUY0 350 aa12.88□□□□□ -0.35
APOE-205ENST00000485628 FAHD2BQ6P2I3 314 aaPredicted RBP12.88□□□□□ -0.35
APOE-205ENST00000485628 ST6GALNAC6Q969X2 333 aa12.88□□□□□ -0.35
APOE-205ENST00000485628 FAHD2AQ96GK7 314 aa12.88□□□□□ -0.35
APOE-205ENST00000485628 SMR3AQ99954 134 aa12.88□□□□□ -0.35
APOE-205ENST00000485628 PCGF1Q9BSM1 259 aa12.88□□□□□ -0.35
APOE-205ENST00000485628 SUCNR1Q9BXA5 334 aa12.88□□□□□ -0.35
APOE-205ENST00000485628 CLEC7AQ9BXN2 247 aa12.88□□□□□ -0.35
APOE-205ENST00000485628 C11orf54Q9H0W9 315 aaPredicted RBP12.88□□□□□ -0.35
APOE-205ENST00000485628 EHFQ9NZC4 300 aa12.88□□□□□ -0.35
APOE-205ENST00000485628 GAB2Q9UQC2 676 aa12.88□□□□□ -0.35
APOE-205ENST00000485628 OR2W1Q9Y3N9 320 aa12.88□□□□□ -0.35
APOE-205ENST00000485628 PROP1O75360 226 aa12.87□□□□□ -0.35
APOE-205ENST00000485628 RGS11O94810 467 aa12.87□□□□□ -0.35
APOE-205ENST00000485628 NFYAP23511 347 aaPredicted RBP12.87□□□□□ -0.35
APOE-205ENST00000485628 NFYBP25208 207 aa12.87□□□□□ -0.35
APOE-205ENST00000485628 OR3A3P47888 321 aa12.87□□□□□ -0.35
APOE-205ENST00000485628 KLRD1Q13241 179 aa12.87□□□□□ -0.35
APOE-205ENST00000485628 MEF2DQ14814 521 aa12.87□□□□□ -0.35
APOE-205ENST00000485628 LTC4SQ16873 150 aa12.87□□□□□ -0.35
APOE-205ENST00000485628 RNASE10Q5GAN6 216 aaKnown RBP12.87□□□□□ -0.35
APOE-205ENST00000485628 PNKDQ8N490 385 aa12.87□□□□□ -0.35
APOE-205ENST00000485628 OR10V1Q8NGI7 309 aa12.87□□□□□ -0.35
APOE-205ENST00000485628 OR4P4Q8NGL7 312 aa12.87□□□□□ -0.35
APOE-205ENST00000485628 OR13D1Q8NGV5 346 aa12.87□□□□□ -0.35
APOE-205ENST00000485628 OR9G1Q8NH87 305 aa12.87□□□□□ -0.35
APOE-205ENST00000485628 LEAP2Q969E1 77 aa12.87□□□□□ -0.35
APOE-205ENST00000485628 BORCS5Q969J3 196 aa12.87□□□□□ -0.35
APOE-205ENST00000485628 C7orf50Q9BRJ6 194 aaKnown RBP12.87□□□□□ -0.35
APOE-205ENST00000485628 IFI27L2Q9H2X8 130 aa12.87□□□□□ -0.35
APOE-205ENST00000485628 GNG12Q9UBI6 72 aa12.87□□□□□ -0.35
APOE-205ENST00000485628 SONP18583 2426 aaKnown RBP12.87□□□□□ -0.35
APOE-205ENST00000485628 IGKV1D-13A0A0B4J2D9 117 aa12.86□□□□□ -0.35
APOE-205ENST00000485628 PPYP01298 95 aa12.86□□□□□ -0.35
APOE-205ENST00000485628 IGLV2-14P01704 120 aa12.86□□□□□ -0.35
APOE-205ENST00000485628 IGKV1-13P0DP09 117 aa12.86□□□□□ -0.35
APOE-205ENST00000485628 AADACP22760 399 aa12.86□□□□□ -0.35
APOE-205ENST00000485628 FCGR2CP31995 323 aa12.86□□□□□ -0.35
APOE-205ENST00000485628 UCP3P55916 312 aa12.86□□□□□ -0.35
APOE-205ENST00000485628 PRB3Q04118 309 aaPredicted RBP12.86□□□□□ -0.35
APOE-205ENST00000485628 ASAH1Q13510 395 aa12.86□□□□□ -0.35
APOE-205ENST00000485628 HLA-DRB5Q30154 266 aa12.86□□□□□ -0.35
APOE-205ENST00000485628 TRIQKQ629K1 86 aa12.86□□□□□ -0.35
APOE-205ENST00000485628 FAAP20Q6NZ36 180 aa12.86□□□□□ -0.35
APOE-205ENST00000485628 PIP4P2Q8N4L2 257 aa12.86□□□□□ -0.35
APOE-205ENST00000485628 OR56B4Q8NH76 319 aa12.86□□□□□ -0.35
APOE-205ENST00000485628 MOB3AQ96BX8 217 aa12.86□□□□□ -0.35
APOE-205ENST00000485628 ZNF251Q9BRH9 671 aa12.86□□□□□ -0.35
APOE-205ENST00000485628 PALMDQ9NP74 551 aa12.86□□□□□ -0.35
APOE-205ENST00000485628 KCNS2Q9ULS6 477 aa12.86□□□□□ -0.35
APOE-205ENST00000485628 NAV3Q8IVL0 2385 aa12.85□□□□□ -0.35
APOE-205ENST00000485628 IGHV1-69DA0A0B4J2H0 117 aa12.85□□□□□ -0.35
APOE-205ENST00000485628 FAM172BPA6NC97 362 aa12.85□□□□□ -0.35
APOE-205ENST00000485628 OR5H14A6NHG9 310 aa12.85□□□□□ -0.35
APOE-205ENST00000485628 HSPA12AO43301 675 aa12.85□□□□□ -0.35
APOE-205ENST00000485628 IGHV1-69P01742 117 aa12.85□□□□□ -0.35
APOE-205ENST00000485628 IGHV4-38-2P0DP08 117 aa12.85□□□□□ -0.35
APOE-205ENST00000485628 BPIFB3P59826 476 aa12.85□□□□□ -0.35
APOE-205ENST00000485628 EIF4EBP1Q13541 118 aaPredicted RBP12.85□□□□□ -0.35
APOE-205ENST00000485628 MIDNQ504T8 468 aa12.85□□□□□ -0.35
APOE-205ENST00000485628 C9orf139Q6ZV77 190 aa12.85□□□□□ -0.35
APOE-205ENST00000485628 OR13C8Q8NGS7 320 aa12.85□□□□□ -0.35
APOE-205ENST00000485628 OR6F1Q8NGZ6 308 aa12.85□□□□□ -0.35
APOE-205ENST00000485628 TERB2Q8NHR7 220 aa12.85□□□□□ -0.35
APOE-205ENST00000485628 EDARADDQ8WWZ3 215 aa12.85□□□□□ -0.35
APOE-205ENST00000485628 LHX4Q969G2 390 aa12.85□□□□□ -0.35
APOE-205ENST00000485628 GINS4Q9BRT9 223 aa12.85□□□□□ -0.35
APOE-205ENST00000485628 ABHD14AQ9BUJ0 271 aa12.85□□□□□ -0.35
APOE-205ENST00000485628 MMP28Q9H239 520 aa12.85□□□□□ -0.35
APOE-205ENST00000485628 GHITMQ9H3K2 345 aa12.85□□□□□ -0.35
APOE-205ENST00000485628 ABCB10Q9NRK6 738 aa12.85□□□□□ -0.35
APOE-205ENST00000485628 ZNRD1Q9P1U0 126 aa12.85□□□□□ -0.35
APOE-205ENST00000485628 ZNF69Q9UC07 566 aa12.85□□□□□ -0.35
APOE-205ENST00000485628 MXRA5Q9NR99 2828 aa12.85□□□□□ -0.35
APOE-205ENST00000485628 NAP1L6A6NFF2 107 aa12.84□□□□□ -0.35
APOE-205ENST00000485628 A8MV72 311 aaPredicted RBP12.84□□□□□ -0.35
APOE-205ENST00000485628 BUB1B-PAK6H3BSN5 160 aa12.84□□□□□ -0.35
APOE-205ENST00000485628 IGHV3-7P01780 117 aa12.84□□□□□ -0.35
APOE-205ENST00000485628 RAB7AP51149 207 aa12.84□□□□□ -0.35
APOE-205ENST00000485628 PRRX1P54821 245 aa12.84□□□□□ -0.35
APOE-205ENST00000485628 MSMO1Q15800 293 aa12.84□□□□□ -0.35
APOE-205ENST00000485628 ZNF57Q68EA5 555 aaPredicted RBP12.84□□□□□ -0.35
APOE-205ENST00000485628 OR51S1Q8NGJ8 323 aa12.84□□□□□ -0.35
APOE-205ENST00000485628 C5orf30Q96GV9 206 aa12.84□□□□□ -0.35
APOE-205ENST00000485628 ZNF2Q9BSG1 426 aaPredicted RBP12.84□□□□□ -0.35
APOE-205ENST00000485628 A0A1W2PPE3 182 aa12.83□□□□□ -0.36
APOE-205ENST00000485628 LYRM1O43325 122 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms