RNA–Protein interactions for RNA: ENST00000485550.5

HMGN1-215, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 745 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-215ENST00000485550 SLC6A1P30531 599 aa8.26□□□□□ -1.09
HMGN1-215ENST00000485550 CDX1P47902 265 aaPredicted RBP8.26□□□□□ -1.09
HMGN1-215ENST00000485550 ZNF137PP52743 207 aa8.26□□□□□ -1.09
HMGN1-215ENST00000485550 WNT4P56705 351 aa8.26□□□□□ -1.09
HMGN1-215ENST00000485550 FOXE3Q13461 319 aa8.26□□□□□ -1.09
HMGN1-215ENST00000485550 KIR2DS1Q14954 304 aa8.26□□□□□ -1.09
HMGN1-215ENST00000485550 MMDQ15546 238 aa8.26□□□□□ -1.09
HMGN1-215ENST00000485550 Q3ZCU0 254 aa8.26□□□□□ -1.09
HMGN1-215ENST00000485550 ACSM3Q53FZ2 586 aa8.26□□□□□ -1.09
HMGN1-215ENST00000485550 FAM27D1Q5T7N8 215 aa8.26□□□□□ -1.09
HMGN1-215ENST00000485550 TRAT1Q6PIZ9 186 aa8.26□□□□□ -1.09
HMGN1-215ENST00000485550 CDH26Q8IXH8 852 aa8.26□□□□□ -1.09
HMGN1-215ENST00000485550 FAM71E2Q8N5Q1 922 aa8.26□□□□□ -1.09
HMGN1-215ENST00000485550 PACRGLQ8N7B6 248 aa8.26□□□□□ -1.09
HMGN1-215ENST00000485550 NANOGP1Q8N7R0 232 aa8.26□□□□□ -1.09
HMGN1-215ENST00000485550 OR8H1Q8NGG4 311 aa8.26□□□□□ -1.09
HMGN1-215ENST00000485550 OR8U1Q8NH10 309 aa8.26□□□□□ -1.09
HMGN1-215ENST00000485550 MRPL30Q8TCC3 161 aaKnown RBP8.26□□□□□ -1.09
HMGN1-215ENST00000485550 EDARADDQ8WWZ3 215 aa8.26□□□□□ -1.09
HMGN1-215ENST00000485550 KCTD7Q96MP8 289 aa8.26□□□□□ -1.09
HMGN1-215ENST00000485550 MRPL20Q9BYC9 149 aaKnown RBP8.26□□□□□ -1.09
HMGN1-215ENST00000485550 KCNK15Q9H427 330 aa8.26□□□□□ -1.09
HMGN1-215ENST00000485550 CNOT2Q9NZN8 540 aaKnown RBP8.26□□□□□ -1.09
HMGN1-215ENST00000485550 ZNF107Q9UII5 783 aaPredicted RBP8.26□□□□□ -1.09
HMGN1-215ENST00000485550 FAM90A10PA6NDY2 464 aa8.25□□□□□ -1.09
HMGN1-215ENST00000485550 FAM90A7PA6NKC0 464 aa8.25□□□□□ -1.09
HMGN1-215ENST00000485550 FAM90A23PA8MXZ1 464 aa8.25□□□□□ -1.09
HMGN1-215ENST00000485550 G3V318 75 aa8.25□□□□□ -1.09
HMGN1-215ENST00000485550 LANCL1O43813 399 aa8.25□□□□□ -1.09
HMGN1-215ENST00000485550 CA11O75493 328 aa8.25□□□□□ -1.09
HMGN1-215ENST00000485550 IGHG4P01861 327 aa8.25□□□□□ -1.09
HMGN1-215ENST00000485550 OR3A3P47888 321 aa8.25□□□□□ -1.09
HMGN1-215ENST00000485550 GP2P55259 537 aaKnown RBP8.25□□□□□ -1.09
HMGN1-215ENST00000485550 ACTBP60709 375 aa8.25□□□□□ -1.09
HMGN1-215ENST00000485550 CFHR3Q02985 330 aa8.25□□□□□ -1.09
HMGN1-215ENST00000485550 TNP2Q05952 138 aa8.25□□□□□ -1.09
HMGN1-215ENST00000485550 GABPB1Q06547 395 aaPredicted RBP8.25□□□□□ -1.09
HMGN1-215ENST00000485550 LSAMPQ13449 338 aa8.25□□□□□ -1.09
HMGN1-215ENST00000485550 TMEM30BQ3MIR4 351 aa8.25□□□□□ -1.09
HMGN1-215ENST00000485550 ZFAND6Q6FIF0 208 aa8.25□□□□□ -1.09
HMGN1-215ENST00000485550 C6orf201Q7Z4U5 140 aa8.25□□□□□ -1.09
HMGN1-215ENST00000485550 ODF3L1Q8IXM7 274 aa8.25□□□□□ -1.09
HMGN1-215ENST00000485550 OR5M8Q8NGP6 311 aa8.25□□□□□ -1.09
HMGN1-215ENST00000485550 NEDD4LQ96PU5 975 aa8.25□□□□□ -1.09
HMGN1-215ENST00000485550 OR5B12Q96R08 314 aa8.25□□□□□ -1.09
HMGN1-215ENST00000485550 NABP2Q9BQ15 211 aa8.25□□□□□ -1.09
HMGN1-215ENST00000485550 SULT4A1Q9BR01 284 aa8.25□□□□□ -1.09
HMGN1-215ENST00000485550 FAAP24Q9BTP7 215 aa8.25□□□□□ -1.09
HMGN1-215ENST00000485550 ABHD14AQ9BUJ0 271 aa8.25□□□□□ -1.09
HMGN1-215ENST00000485550 TMED9Q9BVK6 235 aa8.25□□□□□ -1.09
HMGN1-215ENST00000485550 KLK15Q9H2R5 256 aa8.25□□□□□ -1.09
HMGN1-215ENST00000485550 MBNL3Q9NUK0 354 aaKnown RBP8.25□□□□□ -1.09
HMGN1-215ENST00000485550 ERGIC3Q9Y282 383 aa8.25□□□□□ -1.09
HMGN1-215ENST00000485550 SEC14L6B5MCN3 397 aa8.24□□□□□ -1.09
HMGN1-215ENST00000485550 PTGES3LE9PB15 166 aa8.24□□□□□ -1.09
HMGN1-215ENST00000485550 CD1AP06126 327 aa8.24□□□□□ -1.09
HMGN1-215ENST00000485550 GLAP06280 429 aa8.24□□□□□ -1.09
HMGN1-215ENST00000485550 MAPK3P27361 379 aaPredicted RBP8.24□□□□□ -1.09
HMGN1-215ENST00000485550 HTR2CP28335 458 aa8.24□□□□□ -1.09
HMGN1-215ENST00000485550 ECI1P42126 302 aa8.24□□□□□ -1.09
HMGN1-215ENST00000485550 STEAP3Q658P3 488 aa8.24□□□□□ -1.09
HMGN1-215ENST00000485550 ADAMTSL5Q6ZMM2 481 aa8.24□□□□□ -1.09
HMGN1-215ENST00000485550 NKAIN3Q8N8D7 197 aa8.24□□□□□ -1.09
HMGN1-215ENST00000485550 RNF152Q8N8N0 203 aa8.24□□□□□ -1.09
HMGN1-215ENST00000485550 OR11H1Q8NG94 326 aa8.24□□□□□ -1.09
HMGN1-215ENST00000485550 SETD6Q8TBK2 473 aa8.24□□□□□ -1.09
HMGN1-215ENST00000485550 IL1F10Q8WWZ1 152 aa8.24□□□□□ -1.09
HMGN1-215ENST00000485550 GALMQ96C23 342 aa8.24□□□□□ -1.09
HMGN1-215ENST00000485550 RCHY1Q96PM5 261 aa8.24□□□□□ -1.09
HMGN1-215ENST00000485550 ZNF251Q9BRH9 671 aa8.24□□□□□ -1.09
HMGN1-215ENST00000485550 UQCC2Q9BRT2 126 aa8.24□□□□□ -1.09
HMGN1-215ENST00000485550 NICN1Q9BSH3 213 aa8.24□□□□□ -1.09
HMGN1-215ENST00000485550 ANKRD60Q9BZ19 345 aa8.24□□□□□ -1.09
HMGN1-215ENST00000485550 CST11Q9H112 138 aa8.24□□□□□ -1.09
HMGN1-215ENST00000485550 GNB4Q9HAV0 340 aa8.24□□□□□ -1.09
HMGN1-215ENST00000485550 C8orf4Q9NR00 106 aa8.24□□□□□ -1.09
HMGN1-215ENST00000485550 PARP11Q9NR21 331 aa8.24□□□□□ -1.09
HMGN1-215ENST00000485550 PLCXD1Q9NUJ7 323 aa8.24□□□□□ -1.09
HMGN1-215ENST00000485550 ZMAT5Q9UDW3 170 aaKnown RBP8.24□□□□□ -1.09
HMGN1-215ENST00000485550 JPT1Q9UK76 154 aa8.24□□□□□ -1.09
HMGN1-215ENST00000485550 STARD9Q9P2P6 4700 aa8.24□□□□□ -1.09
HMGN1-215ENST00000485550 SAA2-SAA4A0A096LPE2 208 aa8.23□□□□□ -1.09
HMGN1-215ENST00000485550 ANKRD65E5RJM6 399 aa8.23□□□□□ -1.09
HMGN1-215ENST00000485550 ATP6V0E1O15342 81 aa8.23□□□□□ -1.09
HMGN1-215ENST00000485550 YPEL1O60688 119 aa8.23□□□□□ -1.09
HMGN1-215ENST00000485550 RAMP3O60896 148 aa8.23□□□□□ -1.09
HMGN1-215ENST00000485550 IGF1P05019 195 aa8.23□□□□□ -1.09
HMGN1-215ENST00000485550 SAA2P0DJI9 122 aaPredicted RBP8.23□□□□□ -1.09
HMGN1-215ENST00000485550 OR5H8P0DN80 308 aa8.23□□□□□ -1.09
HMGN1-215ENST00000485550 PSMB8P28062 276 aa8.23□□□□□ -1.09
HMGN1-215ENST00000485550 CHATP28329 748 aa8.23□□□□□ -1.09
HMGN1-215ENST00000485550 HTD2P86397 168 aa8.23□□□□□ -1.09
HMGN1-215ENST00000485550 ZNF260Q3ZCT1 412 aa8.23□□□□□ -1.09
HMGN1-215ENST00000485550 RBM48Q5RL73 367 aaKnown RBP8.23□□□□□ -1.09
HMGN1-215ENST00000485550 C9orf66Q5T8R8 295 aa8.23□□□□□ -1.09
HMGN1-215ENST00000485550 OGFRL1Q5TC84 451 aaPredicted RBP8.23□□□□□ -1.09
HMGN1-215ENST00000485550 GLT8D1Q68CQ7 371 aa8.23□□□□□ -1.09
HMGN1-215ENST00000485550 TMEM65Q6PI78 240 aa8.23□□□□□ -1.09
HMGN1-215ENST00000485550 GLDNQ6ZMI3 551 aaPredicted RBP8.23□□□□□ -1.09
HMGN1-215ENST00000485550 CEACAM19Q7Z692 300 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms