RNA–Protein interactions for RNA: ENST00000485247.1

PTPN4-210, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-210ENST00000485247 NUBP2Q9Y5Y2 271 aa3.91□□□□□ -1.78
PTPN4-210ENST00000485247 CDH10Q9Y6N8 788 aa3.91□□□□□ -1.78
PTPN4-210ENST00000485247 V9GYS6 101 aa3.91□□□□□ -1.78
PTPN4-210ENST00000485247 IGHV4-4A0A075B6R2 117 aa3.9□□□□□ -1.79
PTPN4-210ENST00000485247 IGHV3-43A0A0B4J1X8 118 aa3.9□□□□□ -1.79
PTPN4-210ENST00000485247 TMEM120BA0PK00 339 aa3.9□□□□□ -1.79
PTPN4-210ENST00000485247 FCN1O00602 326 aa3.9□□□□□ -1.79
PTPN4-210ENST00000485247 DEGS1O15121 323 aa3.9□□□□□ -1.79
PTPN4-210ENST00000485247 DEFB4AO15263 64 aa3.9□□□□□ -1.79
PTPN4-210ENST00000485247 SLC31A2O15432 143 aa3.9□□□□□ -1.79
PTPN4-210ENST00000485247 TXNL1O43396 289 aa3.9□□□□□ -1.79
PTPN4-210ENST00000485247 GADD45GO95257 159 aa3.9□□□□□ -1.79
PTPN4-210ENST00000485247 IFNGP01579 166 aa3.9□□□□□ -1.79
PTPN4-210ENST00000485247 IGHV3-43DP0DP04 118 aa3.9□□□□□ -1.79
PTPN4-210ENST00000485247 ZNF3P17036 446 aa3.9□□□□□ -1.79
PTPN4-210ENST00000485247 IFNGR2P38484 337 aa3.9□□□□□ -1.79
PTPN4-210ENST00000485247 FUT6P51993 359 aa3.9□□□□□ -1.79
PTPN4-210ENST00000485247 DEFA5Q01523 94 aa3.9□□□□□ -1.79
PTPN4-210ENST00000485247 AKIRIN2Q53H80 203 aa3.9□□□□□ -1.79
PTPN4-210ENST00000485247 SAMD4BQ5PRF9 694 aaKnown RBP3.9□□□□□ -1.79
PTPN4-210ENST00000485247 RPL13AP3Q6NVV1 102 aa3.9□□□□□ -1.79
PTPN4-210ENST00000485247 Q6P435 159 aa3.9□□□□□ -1.79
PTPN4-210ENST00000485247 CD200R1LQ6Q8B3 271 aa3.9□□□□□ -1.79
PTPN4-210ENST00000485247 PPP1R27Q86WC6 154 aa3.9□□□□□ -1.79
PTPN4-210ENST00000485247 LINC00311Q8N616 119 aa3.9□□□□□ -1.79
PTPN4-210ENST00000485247 TCEANCQ8N8B7 351 aa3.9□□□□□ -1.79
PTPN4-210ENST00000485247 NRACQ8N912 160 aa3.9□□□□□ -1.79
PTPN4-210ENST00000485247 LFNGQ8NES3 379 aa3.9□□□□□ -1.79
PTPN4-210ENST00000485247 OR51T1Q8NGJ9 327 aa3.9□□□□□ -1.79
PTPN4-210ENST00000485247 TMEM109Q9BVC6 243 aa3.9□□□□□ -1.79
PTPN4-210ENST00000485247 TSSK6Q9BXA6 273 aa3.9□□□□□ -1.79
PTPN4-210ENST00000485247 MROQ9BYG7 248 aa3.9□□□□□ -1.79
PTPN4-210ENST00000485247 TTTY10Q9BZA0 68 aa3.9□□□□□ -1.79
PTPN4-210ENST00000485247 PARP12Q9H0J9 701 aaKnown RBP3.9□□□□□ -1.79
PTPN4-210ENST00000485247 ZC4H2Q9NQZ6 224 aa3.9□□□□□ -1.79
PTPN4-210ENST00000485247 INTS9Q9NV88 658 aaKnown RBP3.9□□□□□ -1.79
PTPN4-210ENST00000485247 IL20Q9NYY1 176 aa3.9□□□□□ -1.79
PTPN4-210ENST00000485247 NUFIP1Q9UHK0 495 aaKnown RBP3.9□□□□□ -1.79
PTPN4-210ENST00000485247 LAMP5Q9UJQ1 280 aa3.9□□□□□ -1.79
PTPN4-210ENST00000485247 RNF150Q9ULK6 438 aa3.9□□□□□ -1.79
PTPN4-210ENST00000485247 GAB2Q9UQC2 676 aa3.9□□□□□ -1.79
PTPN4-210ENST00000485247 IGKV1-12A0A0C4DH73 117 aa3.89□□□□□ -1.79
PTPN4-210ENST00000485247 A0A0G2JLM5 398 aa3.89□□□□□ -1.79
PTPN4-210ENST00000485247 A0A1B0GTI1 187 aa3.89□□□□□ -1.79
PTPN4-210ENST00000485247 RIIAD1A6NNX1 92 aa3.89□□□□□ -1.79
PTPN4-210ENST00000485247 C11orf94C9JXX5 98 aa3.89□□□□□ -1.79
PTPN4-210ENST00000485247 SDCBPO00560 298 aaPredicted RBP3.89□□□□□ -1.79
PTPN4-210ENST00000485247 UBE2CO00762 179 aa3.89□□□□□ -1.79
PTPN4-210ENST00000485247 MRASO14807 208 aa3.89□□□□□ -1.79
PTPN4-210ENST00000485247 AIREO43918 545 aa3.89□□□□□ -1.79
PTPN4-210ENST00000485247 IGKV1D-12P01611 117 aa3.89□□□□□ -1.79
PTPN4-210ENST00000485247 FOLR2P14207 255 aa3.89□□□□□ -1.79
PTPN4-210ENST00000485247 NCK1P16333 377 aa3.89□□□□□ -1.79
PTPN4-210ENST00000485247 ALOX5APP20292 161 aa3.89□□□□□ -1.79
PTPN4-210ENST00000485247 FCGR2BP31994 310 aaPredicted RBP3.89□□□□□ -1.79
PTPN4-210ENST00000485247 RBP2P50120 134 aa3.89□□□□□ -1.79
PTPN4-210ENST00000485247 ATP1B3P54709 279 aa3.89□□□□□ -1.79
PTPN4-210ENST00000485247 MTCP1P56278 107 aa3.89□□□□□ -1.79
PTPN4-210ENST00000485247 SMIM11AP58511 58 aa3.89□□□□□ -1.79
PTPN4-210ENST00000485247 LINC00205P59089 165 aa3.89□□□□□ -1.79
PTPN4-210ENST00000485247 PLGLAQ15195 96 aa3.89□□□□□ -1.79
PTPN4-210ENST00000485247 ODF4Q2M2E3 257 aa3.89□□□□□ -1.79
PTPN4-210ENST00000485247 MRGPRG-AS1Q2M3A8 158 aa3.89□□□□□ -1.79
PTPN4-210ENST00000485247 ZNF829Q3KNS6 432 aaPredicted RBP3.89□□□□□ -1.79
PTPN4-210ENST00000485247 MOGAT2Q3SYC2 334 aa3.89□□□□□ -1.79
PTPN4-210ENST00000485247 PAN3Q58A45 887 aaKnown RBP3.89□□□□□ -1.79
PTPN4-210ENST00000485247 C1orf134Q5TEV5 83 aa3.89□□□□□ -1.79
PTPN4-210ENST00000485247 PLEKHG7Q6ZR37 379 aa3.89□□□□□ -1.79
PTPN4-210ENST00000485247 SLC25A48Q6ZT89 311 aaKnown RBP3.89□□□□□ -1.79
PTPN4-210ENST00000485247 NANOGP1Q8N7R0 232 aa3.89□□□□□ -1.79
PTPN4-210ENST00000485247 CHST4Q8NCG5 386 aa3.89□□□□□ -1.79
PTPN4-210ENST00000485247 OR5T1Q8NG75 326 aa3.89□□□□□ -1.79
PTPN4-210ENST00000485247 OR10A7Q8NGE5 316 aa3.89□□□□□ -1.79
PTPN4-210ENST00000485247 PRSS3P2Q8NHM4 247 aa3.89□□□□□ -1.79
PTPN4-210ENST00000485247 OSR1Q8TAX0 266 aaPredicted RBP3.89□□□□□ -1.79
PTPN4-210ENST00000485247 FAM162AQ96A26 154 aa3.89□□□□□ -1.79
PTPN4-210ENST00000485247 RFT1Q96AA3 541 aa3.89□□□□□ -1.79
PTPN4-210ENST00000485247 C7orf34Q96L11 122 aa3.89□□□□□ -1.79
PTPN4-210ENST00000485247 CLCC1Q96S66 551 aa3.89□□□□□ -1.79
PTPN4-210ENST00000485247 RARRES2Q99969 163 aa3.89□□□□□ -1.79
PTPN4-210ENST00000485247 COMMD4Q9H0A8 199 aa3.89□□□□□ -1.79
PTPN4-210ENST00000485247 FBXL15Q9H469 300 aa3.89□□□□□ -1.79
PTPN4-210ENST00000485247 ARMC1Q9NVT9 282 aa3.89□□□□□ -1.79
PTPN4-210ENST00000485247 FAM118AQ9NWS6 357 aa3.89□□□□□ -1.79
PTPN4-210ENST00000485247 DHDHQ9UQ10 334 aa3.89□□□□□ -1.79
PTPN4-210ENST00000485247 APOBP04114 4563 aaKnown RBP3.89□□□□□ -1.79
PTPN4-210ENST00000485247 A0A0B4J203 849 aa3.88□□□□□ -1.79
PTPN4-210ENST00000485247 DHRS7CA6NNS2 312 aa3.88□□□□□ -1.79
PTPN4-210ENST00000485247 PRR32B1ATL7 298 aa3.88□□□□□ -1.79
PTPN4-210ENST00000485247 LOC110117498-PIK3R3F6TDL0 507 aa3.88□□□□□ -1.79
PTPN4-210ENST00000485247 H0YJX3 145 aa3.88□□□□□ -1.79
PTPN4-210ENST00000485247 E2F6O75461 281 aa3.88□□□□□ -1.79
PTPN4-210ENST00000485247 GATBO75879 557 aaKnown RBP3.88□□□□□ -1.79
PTPN4-210ENST00000485247 NDUFA3O95167 84 aa3.88□□□□□ -1.79
PTPN4-210ENST00000485247 SOX14O95416 240 aa3.88□□□□□ -1.79
PTPN4-210ENST00000485247 SERPINA3P01011 423 aa3.88□□□□□ -1.79
PTPN4-210ENST00000485247 P0DMU3 169 aa3.88□□□□□ -1.79
PTPN4-210ENST00000485247 FAM231AP0DMU4 169 aa3.88□□□□□ -1.79
PTPN4-210ENST00000485247 FAM231CP0DMU5 169 aa3.88□□□□□ -1.79
PTPN4-210ENST00000485247 RPL35AP18077 110 aaKnown RBP3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 130.5 ms