RNA–Protein interactions for RNA: ENST00000485102.1

HDAC6-227, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-227ENST00000485102 STEAP3Q658P3 488 aa10.15□□□□□ -0.78
HDAC6-227ENST00000485102 SUMF2Q8NBJ7 301 aa10.15□□□□□ -0.78
HDAC6-227ENST00000485102 RGP1Q92546 391 aaPredicted RBP10.15□□□□□ -0.78
HDAC6-227ENST00000485102 TMEM203Q969S6 136 aa10.15□□□□□ -0.78
HDAC6-227ENST00000485102 MRPS24Q96EL2 167 aaKnown RBP10.15□□□□□ -0.78
HDAC6-227ENST00000485102 UBE2E2Q96LR5 201 aa10.15□□□□□ -0.78
HDAC6-227ENST00000485102 ASCL2Q99929 193 aa10.15□□□□□ -0.78
HDAC6-227ENST00000485102 RASL11BQ9BPW5 248 aa10.15□□□□□ -0.78
HDAC6-227ENST00000485102 FAM192AQ9GZU8 254 aa10.15□□□□□ -0.78
HDAC6-227ENST00000485102 GFOD1Q9NXC2 390 aa10.15□□□□□ -0.78
HDAC6-227ENST00000485102 TAS2R4Q9NYW5 299 aa10.15□□□□□ -0.78
HDAC6-227ENST00000485102 IGHV3-72A0A0B4J1Y9 119 aa10.14□□□□□ -0.79
HDAC6-227ENST00000485102 A0A1W2PPE3 182 aa10.14□□□□□ -0.79
HDAC6-227ENST00000485102 TMEM30CPA0ZSE6 113 aa10.14□□□□□ -0.79
HDAC6-227ENST00000485102 I3L521 148 aa10.14□□□□□ -0.79
HDAC6-227ENST00000485102 BPNT1O95861 308 aa10.14□□□□□ -0.79
HDAC6-227ENST00000485102 CSTBP04080 98 aaKnown RBP10.14□□□□□ -0.79
HDAC6-227ENST00000485102 OR8U8P0C7N1 319 aa10.14□□□□□ -0.79
HDAC6-227ENST00000485102 VDAC1P21796 283 aa10.14□□□□□ -0.79
HDAC6-227ENST00000485102 IL3RAP26951 378 aa10.14□□□□□ -0.79
HDAC6-227ENST00000485102 CALRP27797 417 aaKnown RBP10.14□□□□□ -0.79
HDAC6-227ENST00000485102 PPIFP30405 207 aaKnown RBP10.14□□□□□ -0.79
HDAC6-227ENST00000485102 REG1BP48304 166 aa10.14□□□□□ -0.79
HDAC6-227ENST00000485102 RSU1Q15404 277 aa10.14□□□□□ -0.79
HDAC6-227ENST00000485102 SSX1Q16384 188 aa10.14□□□□□ -0.79
HDAC6-227ENST00000485102 TMEM30BQ3MIR4 351 aa10.14□□□□□ -0.79
HDAC6-227ENST00000485102 PIGYQ3MUY2 71 aa10.14□□□□□ -0.79
HDAC6-227ENST00000485102 SLC25A48Q6ZT89 311 aaKnown RBP10.14□□□□□ -0.79
HDAC6-227ENST00000485102 LINC00596Q86U02 117 aa10.14□□□□□ -0.79
HDAC6-227ENST00000485102 ZNF429Q86V71 674 aa10.14□□□□□ -0.79
HDAC6-227ENST00000485102 OR11H1Q8NG94 326 aa10.14□□□□□ -0.79
HDAC6-227ENST00000485102 TNFAIP8L1Q8WVP5 186 aa10.14□□□□□ -0.79
HDAC6-227ENST00000485102 ARL11Q969Q4 196 aa10.14□□□□□ -0.79
HDAC6-227ENST00000485102 METTL9Q9H1A3 318 aa10.14□□□□□ -0.79
HDAC6-227ENST00000485102 ST3GAL6Q9Y274 331 aa10.14□□□□□ -0.79
HDAC6-227ENST00000485102 DNAH1Q9P2D7 4330 aa10.13□□□□□ -0.79
HDAC6-227ENST00000485102 AIREO43918 545 aa10.13□□□□□ -0.79
HDAC6-227ENST00000485102 MT-ND4P03905 459 aa10.13□□□□□ -0.79
HDAC6-227ENST00000485102 F2RL1P55085 397 aa10.13□□□□□ -0.79
HDAC6-227ENST00000485102 RBM11P57052 281 aaKnown RBP10.13□□□□□ -0.79
HDAC6-227ENST00000485102 RPS25P62851 125 aaKnown RBP10.13□□□□□ -0.79
HDAC6-227ENST00000485102 FABP5Q01469 135 aa10.13□□□□□ -0.79
HDAC6-227ENST00000485102 MPV17LQ2QL34 196 aa10.13□□□□□ -0.79
HDAC6-227ENST00000485102 SATL1Q86VE3 508 aa10.13□□□□□ -0.79
HDAC6-227ENST00000485102 SBSPONQ8IVN8 264 aa10.13□□□□□ -0.79
HDAC6-227ENST00000485102 ZNF491Q8N8L2 437 aa10.13□□□□□ -0.79
HDAC6-227ENST00000485102 ZNF439Q8NDP4 499 aa10.13□□□□□ -0.79
HDAC6-227ENST00000485102 OR51A2Q8NGJ7 313 aa10.13□□□□□ -0.79
HDAC6-227ENST00000485102 OR6M1Q8NGM8 313 aa10.13□□□□□ -0.79
HDAC6-227ENST00000485102 OR13F1Q8NGS4 319 aa10.13□□□□□ -0.79
HDAC6-227ENST00000485102 RCHY1Q96PM5 261 aa10.13□□□□□ -0.79
HDAC6-227ENST00000485102 HSPB9Q9BQS6 159 aa10.13□□□□□ -0.79
HDAC6-227ENST00000485102 CST11Q9H112 138 aa10.13□□□□□ -0.79
HDAC6-227ENST00000485102 LYSTQ99698 3801 aa10.12□□□□□ -0.79
HDAC6-227ENST00000485102 TRAV39A0A0B4J263 110 aa10.12□□□□□ -0.79
HDAC6-227ENST00000485102 FAM90A10PA6NDY2 464 aa10.12□□□□□ -0.79
HDAC6-227ENST00000485102 ZNF736B4DX44 427 aaPredicted RBP10.12□□□□□ -0.79
HDAC6-227ENST00000485102 SDCBPO00560 298 aaPredicted RBP10.12□□□□□ -0.79
HDAC6-227ENST00000485102 OR7C1O76099 320 aaPredicted RBP10.12□□□□□ -0.79
HDAC6-227ENST00000485102 IGLV1-40P01703 118 aa10.12□□□□□ -0.79
HDAC6-227ENST00000485102 MAS1P04201 325 aa10.12□□□□□ -0.79
HDAC6-227ENST00000485102 RAB3BP20337 219 aa10.12□□□□□ -0.79
HDAC6-227ENST00000485102 SCAND1P57086 179 aa10.12□□□□□ -0.79
HDAC6-227ENST00000485102 ZNF616Q08AN1 781 aa10.12□□□□□ -0.79
HDAC6-227ENST00000485102 FAM27D1Q5T7N8 215 aa10.12□□□□□ -0.79
HDAC6-227ENST00000485102 ASPHD1Q5U4P2 390 aa10.12□□□□□ -0.79
HDAC6-227ENST00000485102 ZNF497Q6ZNH5 498 aa10.12□□□□□ -0.79
HDAC6-227ENST00000485102 TMEM91Q6ZNR0 172 aa10.12□□□□□ -0.79
HDAC6-227ENST00000485102 GAPTQ8N292 157 aa10.12□□□□□ -0.79
HDAC6-227ENST00000485102 JAGN1Q8N5M9 183 aa10.12□□□□□ -0.79
HDAC6-227ENST00000485102 OR1N2Q8NGR9 330 aa10.12□□□□□ -0.79
HDAC6-227ENST00000485102 RAB9BQ9NP90 201 aa10.12□□□□□ -0.79
HDAC6-227ENST00000485102 TXNL4BQ9NX01 149 aaKnown RBP10.12□□□□□ -0.79
HDAC6-227ENST00000485102 NDUFA13Q9P0J0 144 aa10.12□□□□□ -0.79
HDAC6-227ENST00000485102 VSIG4Q9Y279 399 aa10.12□□□□□ -0.79
HDAC6-227ENST00000485102 V9GY05 133 aa10.12□□□□□ -0.79
HDAC6-227ENST00000485102 BIRC6Q9NR09 4857 aa10.11□□□□□ -0.79
HDAC6-227ENST00000485102 GEMIN2O14893 280 aaKnown RBP10.11□□□□□ -0.79
HDAC6-227ENST00000485102 LANCL1O43813 399 aa10.11□□□□□ -0.79
HDAC6-227ENST00000485102 HTR3BO95264 441 aa10.11□□□□□ -0.79
HDAC6-227ENST00000485102 GTF2F2P13984 249 aa10.11□□□□□ -0.79
HDAC6-227ENST00000485102 ALDH3B2P48448 385 aa10.11□□□□□ -0.79
HDAC6-227ENST00000485102 ZNF134P52741 427 aa10.11□□□□□ -0.79
HDAC6-227ENST00000485102 ANKRD13BQ86YJ7 626 aa10.11□□□□□ -0.79
HDAC6-227ENST00000485102 OR13C5Q8NGS8 318 aa10.11□□□□□ -0.79
HDAC6-227ENST00000485102 OR10K1Q8NGX5 313 aa10.11□□□□□ -0.79
HDAC6-227ENST00000485102 RAB2BQ8WUD1 216 aa10.11□□□□□ -0.79
HDAC6-227ENST00000485102 YIPF6Q96EC8 236 aa10.11□□□□□ -0.79
HDAC6-227ENST00000485102 KLK15Q9H2R5 256 aa10.11□□□□□ -0.79
HDAC6-227ENST00000485102 PLGRKTQ9HBL7 147 aa10.11□□□□□ -0.79
HDAC6-227ENST00000485102 SPACA1Q9HBV2 294 aa10.11□□□□□ -0.79
HDAC6-227ENST00000485102 ZNF581Q9P0T4 197 aa10.11□□□□□ -0.79
HDAC6-227ENST00000485102 ZNF107Q9UII5 783 aaPredicted RBP10.11□□□□□ -0.79
HDAC6-227ENST00000485102 EPPK1P58107 5090 aaKnown RBP10.1□□□□□ -0.79
HDAC6-227ENST00000485102 CSMD3Q7Z407 3707 aa10.1□□□□□ -0.79
HDAC6-227ENST00000485102 LOC100506127A0A0U1RQW1 187 aa10.1□□□□□ -0.79
HDAC6-227ENST00000485102 FAM90A7PA6NKC0 464 aa10.1□□□□□ -0.79
HDAC6-227ENST00000485102 FAM90A23PA8MXZ1 464 aa10.1□□□□□ -0.79
HDAC6-227ENST00000485102 SCGNO76038 276 aa10.1□□□□□ -0.79
HDAC6-227ENST00000485102 CDRT1O95170 752 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms