RNA–Protein interactions for RNA: ENST00000485055.5

CCDC39-205, Transcript of coiled-coil domain containing 39, humanhuman

TSL 1 (best)

Gene CCDC39, Length 2,874 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-205ENST00000485055 LEG1Q6P5S2 330 aa4.35□□□□□ -1.71
CCDC39-205ENST00000485055 OR4C13Q8NGP0 309 aa4.35□□□□□ -1.71
CCDC39-205ENST00000485055 ZNF563Q8TA94 476 aa4.35□□□□□ -1.71
CCDC39-205ENST00000485055 TXNDC15Q96J42 360 aa4.35□□□□□ -1.71
CCDC39-205ENST00000485055 PRSS27Q9BQR3 290 aa4.35□□□□□ -1.71
CCDC39-205ENST00000485055 TAPBPLQ9BX59 468 aa4.35□□□□□ -1.71
CCDC39-205ENST00000485055 KRTAP3-3Q9BYR6 98 aa4.35□□□□□ -1.71
CCDC39-205ENST00000485055 KRTAP3-2Q9BYR7 98 aa4.35□□□□□ -1.71
CCDC39-205ENST00000485055 LRBAP50851 2863 aa4.35□□□□□ -1.71
CCDC39-205ENST00000485055 IGHV1-18A0A0C4DH31 117 aa4.35□□□□□ -1.71
CCDC39-205ENST00000485055 A0A1B0GWA3 101 aa4.35□□□□□ -1.71
CCDC39-205ENST00000485055 CLDN24A6NM45 220 aa4.35□□□□□ -1.71
CCDC39-205ENST00000485055 ZNF587BE7ETH6 402 aa4.35□□□□□ -1.71
CCDC39-205ENST00000485055 K7EP13 123 aa4.35□□□□□ -1.71
CCDC39-205ENST00000485055 PPIHO43447 177 aaKnown RBP4.35□□□□□ -1.71
CCDC39-205ENST00000485055 PDE6DO43924 150 aa4.35□□□□□ -1.71
CCDC39-205ENST00000485055 HBE1P02100 147 aa4.35□□□□□ -1.71
CCDC39-205ENST00000485055 ARG1P05089 322 aa4.35□□□□□ -1.71
CCDC39-205ENST00000485055 SOD3P08294 240 aa4.35□□□□□ -1.71
CCDC39-205ENST00000485055 SMIM6P0DI80 62 aa4.35□□□□□ -1.71
CCDC39-205ENST00000485055 ALOX5APP20292 161 aa4.35□□□□□ -1.71
CCDC39-205ENST00000485055 RPL4P36578 427 aaKnown RBP4.35□□□□□ -1.71
CCDC39-205ENST00000485055 CRYBA2P53672 197 aa4.35□□□□□ -1.71
CCDC39-205ENST00000485055 HCCSP53701 268 aa4.35□□□□□ -1.71
CCDC39-205ENST00000485055 COPZ1P61923 177 aa4.35□□□□□ -1.71
CCDC39-205ENST00000485055 PAGE3Q5JUK9 113 aa4.35□□□□□ -1.71
CCDC39-205ENST00000485055 AAED1Q7RTV5 226 aa4.35□□□□□ -1.71
CCDC39-205ENST00000485055 SLC36A1Q7Z2H8 476 aa4.35□□□□□ -1.71
CCDC39-205ENST00000485055 TEX29Q8N6K0 151 aa4.35□□□□□ -1.71
CCDC39-205ENST00000485055 OR2T33Q8NG76 320 aa4.35□□□□□ -1.71
CCDC39-205ENST00000485055 OR9Q1Q8NGQ5 310 aa4.35□□□□□ -1.71
CCDC39-205ENST00000485055 UFD1Q92890 307 aa4.35□□□□□ -1.71
CCDC39-205ENST00000485055 C20orf173Q96LM9 149 aa4.35□□□□□ -1.71
CCDC39-205ENST00000485055 GPX7Q96SL4 187 aaPredicted RBP4.35□□□□□ -1.71
CCDC39-205ENST00000485055 REG4Q9BYZ8 158 aa4.35□□□□□ -1.71
CCDC39-205ENST00000485055 FIS1Q9Y3D6 152 aa4.35□□□□□ -1.71
CCDC39-205ENST00000485055 CNTRLQ7Z7A1 2325 aa4.34□□□□□ -1.71
CCDC39-205ENST00000485055 SVILO95425 2214 aa4.34□□□□□ -1.71
CCDC39-205ENST00000485055 TRAPPC13A5PLN9 417 aa4.34□□□□□ -1.71
CCDC39-205ENST00000485055 FXYD1O00168 92 aa4.34□□□□□ -1.71
CCDC39-205ENST00000485055 UBL3O95164 117 aa4.34□□□□□ -1.71
CCDC39-205ENST00000485055 CD55P08174 381 aa4.34□□□□□ -1.71
CCDC39-205ENST00000485055 ZNF250P15622 560 aa4.34□□□□□ -1.71
CCDC39-205ENST00000485055 HOXB6P17509 224 aaKnown RBP4.34□□□□□ -1.71
CCDC39-205ENST00000485055 TNFSF8P32971 234 aa4.34□□□□□ -1.71
CCDC39-205ENST00000485055 ERVFRD-1P60508 538 aa4.34□□□□□ -1.71
CCDC39-205ENST00000485055 OPCMLQ14982 345 aa4.34□□□□□ -1.71
CCDC39-205ENST00000485055 SHFQ7M4L6 423 aa4.34□□□□□ -1.71
CCDC39-205ENST00000485055 FBXL14Q8N1E6 418 aa4.34□□□□□ -1.71
CCDC39-205ENST00000485055 MTURNQ8N3F0 131 aa4.34□□□□□ -1.71
CCDC39-205ENST00000485055 GPR32P1Q8NGA4 272 aa4.34□□□□□ -1.71
CCDC39-205ENST00000485055 OR5J2Q8NH18 312 aa4.34□□□□□ -1.71
CCDC39-205ENST00000485055 SYNPRQ8TBG9 265 aa4.34□□□□□ -1.71
CCDC39-205ENST00000485055 TOMM40LQ969M1 308 aa4.34□□□□□ -1.71
CCDC39-205ENST00000485055 RBP7Q96R05 134 aa4.34□□□□□ -1.71
CCDC39-205ENST00000485055 MS4A6AQ9H2W1 248 aa4.34□□□□□ -1.71
CCDC39-205ENST00000485055 CACYBPQ9HB71 228 aaKnown RBP4.34□□□□□ -1.71
CCDC39-205ENST00000485055 ZNF224Q9NZL3 707 aa4.34□□□□□ -1.71
CCDC39-205ENST00000485055 TRGV11A0A075B6L2 103 aa4.34□□□□□ -1.72
CCDC39-205ENST00000485055 C9orf170A2RU37 121 aa4.34□□□□□ -1.72
CCDC39-205ENST00000485055 SSNA1O43805 119 aa4.34□□□□□ -1.72
CCDC39-205ENST00000485055 RAMP1O60894 148 aa4.34□□□□□ -1.72
CCDC39-205ENST00000485055 NDUFS7O75251 213 aa4.34□□□□□ -1.72
CCDC39-205ENST00000485055 PTHP01270 115 aa4.34□□□□□ -1.72
CCDC39-205ENST00000485055 CRYAAP02489 173 aa4.34□□□□□ -1.72
CCDC39-205ENST00000485055 C1QCP02747 245 aa4.34□□□□□ -1.72
CCDC39-205ENST00000485055 SEMG1P04279 462 aa4.34□□□□□ -1.72
CCDC39-205ENST00000485055 RPL35AP18077 110 aaKnown RBP4.34□□□□□ -1.72
CCDC39-205ENST00000485055 NR4A1P22736 598 aa4.34□□□□□ -1.72
CCDC39-205ENST00000485055 EDNRAP25101 427 aa4.34□□□□□ -1.72
CCDC39-205ENST00000485055 CD200P41217 278 aa4.34□□□□□ -1.72
CCDC39-205ENST00000485055 RAB2AP61019 212 aa4.34□□□□□ -1.72
CCDC39-205ENST00000485055 RPS23P62266 143 aaKnown RBP4.34□□□□□ -1.72
CCDC39-205ENST00000485055 HIST1H3AP68431 136 aa4.34□□□□□ -1.72
CCDC39-205ENST00000485055 CLEC12BQ2HXU8 276 aa4.34□□□□□ -1.72
CCDC39-205ENST00000485055 VMACQ2NL98 169 aa4.34□□□□□ -1.72
CCDC39-205ENST00000485055 HLA-DRB5Q30154 266 aa4.34□□□□□ -1.72
CCDC39-205ENST00000485055 ALG10Q5BKT4 473 aa4.34□□□□□ -1.72
CCDC39-205ENST00000485055 ALG10BQ5I7T1 473 aa4.34□□□□□ -1.72
CCDC39-205ENST00000485055 HIST2H3PS2Q5TEC6 136 aa4.34□□□□□ -1.72
CCDC39-205ENST00000485055 TMEM65Q6PI78 240 aa4.34□□□□□ -1.72
CCDC39-205ENST00000485055 HIST2H3AQ71DI3 136 aa4.34□□□□□ -1.72
CCDC39-205ENST00000485055 DHRSXQ8N5I4 330 aa4.34□□□□□ -1.72
CCDC39-205ENST00000485055 KBTBD8Q8NFY9 601 aa4.34□□□□□ -1.72
CCDC39-205ENST00000485055 DUX3Q96PT4 197 aa4.34□□□□□ -1.72
CCDC39-205ENST00000485055 TMEM59Q9BXS4 323 aa4.34□□□□□ -1.72
CCDC39-205ENST00000485055 TPSG1Q9NRR2 321 aa4.34□□□□□ -1.72
CCDC39-205ENST00000485055 TAS2R5Q9NYW4 299 aa4.34□□□□□ -1.72
CCDC39-205ENST00000485055 COPS3Q9UNS2 423 aa4.34□□□□□ -1.72
CCDC39-205ENST00000485055 NUP214P35658 2090 aaPredicted RBP4.34□□□□□ -1.72
CCDC39-205ENST00000485055 HIVEP1P15822 2718 aa4.33□□□□□ -1.72
CCDC39-205ENST00000485055 ANKHD1Q8IWZ3 2542 aaKnown RBP4.33□□□□□ -1.72
CCDC39-205ENST00000485055 MEIOCA2RUB1 952 aa4.33□□□□□ -1.72
CCDC39-205ENST00000485055 BHLHE40O14503 412 aa4.33□□□□□ -1.72
CCDC39-205ENST00000485055 ZNF207O43670 478 aaKnown RBP4.33□□□□□ -1.72
CCDC39-205ENST00000485055 THY1P04216 161 aa4.33□□□□□ -1.72
CCDC39-205ENST00000485055 GIPP09681 153 aaPredicted RBP4.33□□□□□ -1.72
CCDC39-205ENST00000485055 OR10J4P0C629 311 aa4.33□□□□□ -1.72
CCDC39-205ENST00000485055 PGA4P0DJD7 388 aa4.33□□□□□ -1.72
CCDC39-205ENST00000485055 PGA3P0DJD8 388 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms