RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 THAP6Q8TBB0 222 aa11.65□□□□□ -0.54
CLK3-204ENST00000483723 YPEL2Q96QA6 119 aa11.65□□□□□ -0.54
CLK3-204ENST00000483723 GPHA2Q96T91 129 aa11.65□□□□□ -0.54
CLK3-204ENST00000483723 MFFQ9GZY8 342 aa11.65□□□□□ -0.54
CLK3-204ENST00000483723 KAAG1Q9UBP8 84 aa11.65□□□□□ -0.54
CLK3-204ENST00000483723 JPT1Q9UK76 154 aa11.65□□□□□ -0.54
CLK3-204ENST00000483723 NKX6-3A6NJ46 265 aa11.64□□□□□ -0.55
CLK3-204ENST00000483723 ITGB1BP1O14713 200 aa11.64□□□□□ -0.55
CLK3-204ENST00000483723 EDDM3BP56851 147 aa11.64□□□□□ -0.55
CLK3-204ENST00000483723 ZNF345Q14585 488 aa11.64□□□□□ -0.55
CLK3-204ENST00000483723 LRRC37A5PQ49AS3 106 aa11.64□□□□□ -0.55
CLK3-204ENST00000483723 ESCO2Q56NI9 601 aa11.64□□□□□ -0.55
CLK3-204ENST00000483723 TMEM268Q5VZI3 342 aa11.64□□□□□ -0.55
CLK3-204ENST00000483723 C11orf71Q6IPW1 123 aa11.64□□□□□ -0.55
CLK3-204ENST00000483723 PRSS54Q6PEW0 395 aa11.64□□□□□ -0.55
CLK3-204ENST00000483723 TCF23Q7RTU1 214 aa11.64□□□□□ -0.55
CLK3-204ENST00000483723 ZNF645Q8N7E2 425 aa11.64□□□□□ -0.55
CLK3-204ENST00000483723 AGMATQ9BSE5 352 aa11.64□□□□□ -0.55
CLK3-204ENST00000483723 RAB9BQ9NP90 201 aa11.64□□□□□ -0.55
CLK3-204ENST00000483723 CBLN4Q9NTU7 201 aa11.64□□□□□ -0.55
CLK3-204ENST00000483723 CALYQ9NYX4 217 aa11.64□□□□□ -0.55
CLK3-204ENST00000483723 RBM7Q9Y580 266 aaKnown RBP11.64□□□□□ -0.55
CLK3-204ENST00000483723 PIGBOS1A0A0B4J2F0 54 aa11.63□□□□□ -0.55
CLK3-204ENST00000483723 A0A0D9SG52 128 aa11.63□□□□□ -0.55
CLK3-204ENST00000483723 KBTBD11-OT1A0A1B0GTJ5 212 aa11.63□□□□□ -0.55
CLK3-204ENST00000483723 NDUFA2O43678 99 aa11.63□□□□□ -0.55
CLK3-204ENST00000483723 FCN3O75636 299 aa11.63□□□□□ -0.55
CLK3-204ENST00000483723 OR2F2O95006 317 aa11.63□□□□□ -0.55
CLK3-204ENST00000483723 PPP1CCP36873 323 aaKnown RBP11.63□□□□□ -0.55
CLK3-204ENST00000483723 OR2F1Q13607 317 aa11.63□□□□□ -0.55
CLK3-204ENST00000483723 RAB32Q13637 225 aa11.63□□□□□ -0.55
CLK3-204ENST00000483723 MORN2Q502X0 79 aa11.63□□□□□ -0.55
CLK3-204ENST00000483723 ACOT7LQ6ZUV0 252 aa11.63□□□□□ -0.55
CLK3-204ENST00000483723 ZNF767PQ75MW2 155 aa11.63□□□□□ -0.55
CLK3-204ENST00000483723 KCNRGQ8N5I3 272 aa11.63□□□□□ -0.55
CLK3-204ENST00000483723 SLC35G3Q8N808 338 aa11.63□□□□□ -0.55
CLK3-204ENST00000483723 NINJ1Q92982 152 aa11.63□□□□□ -0.55
CLK3-204ENST00000483723 MBD2Q9UBB5 411 aa11.63□□□□□ -0.55
CLK3-204ENST00000483723 CLN8Q9UBY8 286 aa11.63□□□□□ -0.55
CLK3-204ENST00000483723 ROS1P08922 2347 aa11.63□□□□□ -0.55
CLK3-204ENST00000483723 TRGV10A0A0A0MS01 117 aa11.63□□□□□ -0.55
CLK3-204ENST00000483723 CLEC18AA5D8T8 446 aa11.63□□□□□ -0.55
CLK3-204ENST00000483723 RNF222A6NCQ9 220 aa11.63□□□□□ -0.55
CLK3-204ENST00000483723 ZNF729A6NN14 1252 aaPredicted RBP11.63□□□□□ -0.55
CLK3-204ENST00000483723 TNFSF12O43508 249 aa11.63□□□□□ -0.55
CLK3-204ENST00000483723 DANCRP0C864 163 aa11.63□□□□□ -0.55
CLK3-204ENST00000483723 MEF2CQ06413 473 aaPredicted RBP11.63□□□□□ -0.55
CLK3-204ENST00000483723 TEX261Q6UWH6 196 aa11.63□□□□□ -0.55
CLK3-204ENST00000483723 MEX3BQ6ZN04 569 aaKnown RBP11.63□□□□□ -0.55
CLK3-204ENST00000483723 DTX2Q86UW9 622 aa11.63□□□□□ -0.55
CLK3-204ENST00000483723 ZNF695Q8IW36 515 aa11.63□□□□□ -0.55
CLK3-204ENST00000483723 CLEC18CQ8NCF0 446 aa11.63□□□□□ -0.55
CLK3-204ENST00000483723 RBPMSQ93062 196 aaKnown RBP11.63□□□□□ -0.55
CLK3-204ENST00000483723 C5orf30Q96GV9 206 aa11.63□□□□□ -0.55
CLK3-204ENST00000483723 GSKIPQ9P0R6 139 aa11.63□□□□□ -0.55
CLK3-204ENST00000483723 GAB2Q9UQC2 676 aa11.63□□□□□ -0.55
CLK3-204ENST00000483723 U3KQ87 197 aa11.63□□□□□ -0.55
CLK3-204ENST00000483723 NBASA2RRP1 2371 aa11.62□□□□□ -0.55
CLK3-204ENST00000483723 IGHV3-43A0A0B4J1X8 118 aa11.62□□□□□ -0.55
CLK3-204ENST00000483723 C19orf84I3L1E1 186 aa11.62□□□□□ -0.55
CLK3-204ENST00000483723 TMPRSS2O15393 492 aa11.62□□□□□ -0.55
CLK3-204ENST00000483723 TSC22D2O75157 780 aa11.62□□□□□ -0.55
CLK3-204ENST00000483723 IGHV3-43DP0DP04 118 aa11.62□□□□□ -0.55
CLK3-204ENST00000483723 VDAC1P21796 283 aa11.62□□□□□ -0.55
CLK3-204ENST00000483723 COL8A2P25067 703 aa11.62□□□□□ -0.55
CLK3-204ENST00000483723 HFEQ30201 348 aa11.62□□□□□ -0.55
CLK3-204ENST00000483723 TMEM30BQ3MIR4 351 aa11.62□□□□□ -0.55
CLK3-204ENST00000483723 ZNF585BQ52M93 769 aa11.62□□□□□ -0.55
CLK3-204ENST00000483723 EDARADDQ8WWZ3 215 aa11.62□□□□□ -0.55
CLK3-204ENST00000483723 TAS2R3Q9NYW6 316 aa11.62□□□□□ -0.55
CLK3-204ENST00000483723 SLC25A10Q9UBX3 287 aaPredicted RBP11.62□□□□□ -0.55
CLK3-204ENST00000483723 A0A1W2PPR1 153 aa11.61□□□□□ -0.55
CLK3-204ENST00000483723 MEX3AA1L020 520 aaKnown RBP11.61□□□□□ -0.55
CLK3-204ENST00000483723 RNF212BA8MTL3 300 aa11.61□□□□□ -0.55
CLK3-204ENST00000483723 B8ZZF3 427 aa11.61□□□□□ -0.55
CLK3-204ENST00000483723 NMSQ5H8A3 153 aa11.61□□□□□ -0.55
CLK3-204ENST00000483723 LYPD2Q6UXB3 125 aa11.61□□□□□ -0.55
CLK3-204ENST00000483723 FGFRL1Q8N441 504 aa11.61□□□□□ -0.55
CLK3-204ENST00000483723 ZNF680Q8NEM1 530 aa11.61□□□□□ -0.55
CLK3-204ENST00000483723 OR52M1Q8NGK5 317 aa11.61□□□□□ -0.55
CLK3-204ENST00000483723 OR4D5Q8NGN0 318 aa11.61□□□□□ -0.55
CLK3-204ENST00000483723 ARL6Q9H0F7 186 aa11.61□□□□□ -0.55
CLK3-204ENST00000483723 RAB1BQ9H0U4 201 aa11.61□□□□□ -0.55
CLK3-204ENST00000483723 OR2D2Q9H210 308 aa11.61□□□□□ -0.55
CLK3-204ENST00000483723 PLEKHF2Q9H8W4 249 aa11.61□□□□□ -0.55
CLK3-204ENST00000483723 FAM212BQ9NTI7 297 aaPredicted RBP11.61□□□□□ -0.55
CLK3-204ENST00000483723 GFOD1Q9NXC2 390 aa11.61□□□□□ -0.55
CLK3-204ENST00000483723 OR5AC2Q9NZP5 309 aa11.61□□□□□ -0.55
CLK3-204ENST00000483723 RNF150Q9ULK6 438 aa11.61□□□□□ -0.55
CLK3-204ENST00000483723 KCNS2Q9ULS6 477 aa11.61□□□□□ -0.55
CLK3-204ENST00000483723 LINC00312Q9Y6C7 94 aa11.61□□□□□ -0.55
CLK3-204ENST00000483723 hADV38S2A0JD32 116 aa11.6□□□□□ -0.55
CLK3-204ENST00000483723 RP2O75695 350 aa11.6□□□□□ -0.55
CLK3-204ENST00000483723 PET100P0DJ07 73 aa11.6□□□□□ -0.55
CLK3-204ENST00000483723 MRPS11P82912 194 aaKnown RBP11.6□□□□□ -0.55
CLK3-204ENST00000483723 ZNF66Q6ZN08 573 aa11.6□□□□□ -0.55
CLK3-204ENST00000483723 TCTEX1D1Q8N7M0 179 aa11.6□□□□□ -0.55
CLK3-204ENST00000483723 OR10A7Q8NGE5 316 aa11.6□□□□□ -0.55
CLK3-204ENST00000483723 OR8H1Q8NGG4 311 aa11.6□□□□□ -0.55
CLK3-204ENST00000483723 OR51H1Q8NH63 302 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms